Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0499:0469
Extra
PDB:
ATOM 1 O3' U A 498 19.884 149.968 65.530 1.00 70.64 O
ATOM 2 P A A 499 18.984 149.522 64.279 1.00 70.61 P
ATOM 3 OP1 A A 499 17.834 150.452 64.142 1.00 70.56 O
ATOM 4 OP2 A A 499 18.725 148.063 64.473 1.00 72.27 O
ATOM 5 O5' A A 499 19.954 149.742 63.030 1.00 65.15 O
ATOM 6 C5' A A 499 20.697 150.973 62.889 1.00 58.16 C
ATOM 7 C4' A A 499 21.689 150.877 61.751 1.00 53.07 C
ATOM 8 O4' A A 499 20.988 150.604 60.509 1.00 51.93 O
ATOM 9 C3' A A 499 22.437 152.172 61.476 1.00 50.86 C
ATOM 10 O3' A A 499 23.562 152.321 62.329 1.00 47.73 O
ATOM 11 C2' A A 499 22.833 152.021 60.018 1.00 50.50 C
ATOM 12 O2' A A 499 23.962 151.199 59.843 1.00 50.54 O
ATOM 13 C1' A A 499 21.593 151.328 59.445 1.00 50.96 C
ATOM 14 N9 A A 499 20.620 152.298 58.936 1.00 50.21 N
ATOM 15 C8 A A 499 19.448 152.706 59.523 1.00 49.41 C
ATOM 16 N7 A A 499 18.814 153.630 58.849 1.00 49.06 N
ATOM 17 C5 A A 499 19.613 153.840 57.738 1.00 49.67 C
ATOM 18 C6 A A 499 19.495 154.708 56.642 1.00 49.66 C
ATOM 19 N6 A A 499 18.492 155.571 56.490 1.00 48.64 N
ATOM 20 N1 A A 499 20.460 154.665 55.699 1.00 50.18 N
ATOM 21 C2 A A 499 21.472 153.809 55.861 1.00 50.51 C
ATOM 22 N3 A A 499 21.699 152.947 56.851 1.00 50.02 N
ATOM 23 C4 A A 499 20.721 153.014 57.769 1.00 49.61 C
ATOM 24 P G A 500 23.694 153.628 63.248 1.00 45.76 P
ATOM 25 OP1 G A 500 24.812 153.395 64.189 1.00 46.37 O
ATOM 26 OP2 G A 500 22.354 153.989 63.783 1.00 44.93 O
ATOM 27 O5' G A 500 24.138 154.750 62.215 1.00 45.29 O
TER
ATOM 1 O3' C B 468 29.439 147.143 54.412 1.00 40.68 O
ATOM 2 P U B 469 29.284 148.698 54.053 1.00 41.14 P
ATOM 3 OP1 U B 469 29.136 148.752 52.578 1.00 41.34 O
ATOM 4 OP2 U B 469 30.362 149.473 54.714 1.00 42.69 O
ATOM 5 O5' U B 469 27.909 149.127 54.724 1.00 40.06 O
ATOM 6 C5' U B 469 27.755 149.130 56.143 1.00 38.00 C
ATOM 7 C4' U B 469 26.701 150.133 56.545 1.00 40.71 C
ATOM 8 O4' U B 469 27.199 151.483 56.351 1.00 41.19 O
ATOM 9 C3' U B 469 25.412 150.089 55.741 1.00 39.63 C
ATOM 10 O3' U B 469 24.534 149.068 56.212 1.00 40.87 O
ATOM 11 C2' U B 469 24.847 151.485 55.970 1.00 40.74 C
ATOM 12 O2' U B 469 24.192 151.625 57.217 1.00 38.95 O
ATOM 13 C1' U B 469 26.126 152.330 55.981 1.00 40.81 C
ATOM 14 N1 U B 469 26.444 152.985 54.700 1.00 41.43 N
ATOM 15 C2 U B 469 25.736 154.132 54.383 1.00 41.33 C
ATOM 16 O2 U B 469 24.861 154.588 55.095 1.00 43.47 O
ATOM 17 N3 U B 469 26.088 154.727 53.202 1.00 40.36 N
ATOM 18 C4 U B 469 27.047 154.311 52.317 1.00 42.09 C
ATOM 19 O4 U B 469 27.286 155.003 51.325 1.00 43.32 O
ATOM 20 C5 U B 469 27.729 153.106 52.697 1.00 41.26 C
ATOM 21 C6 U B 469 27.411 152.499 53.847 1.00 40.55 C
ATOM 22 P G B 470 23.788 148.105 55.162 1.00 41.32 P
ATOM 23 OP1 G B 470 22.892 147.216 55.943 1.00 42.39 O
ATOM 24 OP2 G B 470 24.789 147.509 54.243 1.00 39.42 O
ATOM 25 O5' G B 470 22.875 149.105 54.328 1.00 40.67 O
TER
ATOM 2 P A A 499 18.984 149.522 64.279 1.00 70.61 P
ATOM 3 OP1 A A 499 17.834 150.452 64.142 1.00 70.56 O
ATOM 4 OP2 A A 499 18.725 148.063 64.473 1.00 72.27 O
ATOM 5 O5' A A 499 19.954 149.742 63.030 1.00 65.15 O
ATOM 6 C5' A A 499 20.697 150.973 62.889 1.00 58.16 C
ATOM 7 C4' A A 499 21.689 150.877 61.751 1.00 53.07 C
ATOM 8 O4' A A 499 20.988 150.604 60.509 1.00 51.93 O
ATOM 9 C3' A A 499 22.437 152.172 61.476 1.00 50.86 C
ATOM 10 O3' A A 499 23.562 152.321 62.329 1.00 47.73 O
ATOM 11 C2' A A 499 22.833 152.021 60.018 1.00 50.50 C
ATOM 12 O2' A A 499 23.962 151.199 59.843 1.00 50.54 O
ATOM 13 C1' A A 499 21.593 151.328 59.445 1.00 50.96 C
ATOM 14 N9 A A 499 20.620 152.298 58.936 1.00 50.21 N
ATOM 15 C8 A A 499 19.448 152.706 59.523 1.00 49.41 C
ATOM 16 N7 A A 499 18.814 153.630 58.849 1.00 49.06 N
ATOM 17 C5 A A 499 19.613 153.840 57.738 1.00 49.67 C
ATOM 18 C6 A A 499 19.495 154.708 56.642 1.00 49.66 C
ATOM 19 N6 A A 499 18.492 155.571 56.490 1.00 48.64 N
ATOM 20 N1 A A 499 20.460 154.665 55.699 1.00 50.18 N
ATOM 21 C2 A A 499 21.472 153.809 55.861 1.00 50.51 C
ATOM 22 N3 A A 499 21.699 152.947 56.851 1.00 50.02 N
ATOM 23 C4 A A 499 20.721 153.014 57.769 1.00 49.61 C
ATOM 24 P G A 500 23.694 153.628 63.248 1.00 45.76 P
ATOM 25 OP1 G A 500 24.812 153.395 64.189 1.00 46.37 O
ATOM 26 OP2 G A 500 22.354 153.989 63.783 1.00 44.93 O
ATOM 27 O5' G A 500 24.138 154.750 62.215 1.00 45.29 O
TER
ATOM 1 O3' C B 468 29.439 147.143 54.412 1.00 40.68 O
ATOM 2 P U B 469 29.284 148.698 54.053 1.00 41.14 P
ATOM 3 OP1 U B 469 29.136 148.752 52.578 1.00 41.34 O
ATOM 4 OP2 U B 469 30.362 149.473 54.714 1.00 42.69 O
ATOM 5 O5' U B 469 27.909 149.127 54.724 1.00 40.06 O
ATOM 6 C5' U B 469 27.755 149.130 56.143 1.00 38.00 C
ATOM 7 C4' U B 469 26.701 150.133 56.545 1.00 40.71 C
ATOM 8 O4' U B 469 27.199 151.483 56.351 1.00 41.19 O
ATOM 9 C3' U B 469 25.412 150.089 55.741 1.00 39.63 C
ATOM 10 O3' U B 469 24.534 149.068 56.212 1.00 40.87 O
ATOM 11 C2' U B 469 24.847 151.485 55.970 1.00 40.74 C
ATOM 12 O2' U B 469 24.192 151.625 57.217 1.00 38.95 O
ATOM 13 C1' U B 469 26.126 152.330 55.981 1.00 40.81 C
ATOM 14 N1 U B 469 26.444 152.985 54.700 1.00 41.43 N
ATOM 15 C2 U B 469 25.736 154.132 54.383 1.00 41.33 C
ATOM 16 O2 U B 469 24.861 154.588 55.095 1.00 43.47 O
ATOM 17 N3 U B 469 26.088 154.727 53.202 1.00 40.36 N
ATOM 18 C4 U B 469 27.047 154.311 52.317 1.00 42.09 C
ATOM 19 O4 U B 469 27.286 155.003 51.325 1.00 43.32 O
ATOM 20 C5 U B 469 27.729 153.106 52.697 1.00 41.26 C
ATOM 21 C6 U B 469 27.411 152.499 53.847 1.00 40.55 C
ATOM 22 P G B 470 23.788 148.105 55.162 1.00 41.32 P
ATOM 23 OP1 G B 470 22.892 147.216 55.943 1.00 42.39 O
ATOM 24 OP2 G B 470 24.789 147.509 54.243 1.00 39.42 O
ATOM 25 O5' G B 470 22.875 149.105 54.328 1.00 40.67 O
TER
Atoms:
OP1: (17.834,150.452,64.142)
OP2: (18.725,148.063,64.473)
C3': (22.437,152.172,61.476)
C1': (21.593,151.328,59.445)
C5': (20.697,150.973,62.889)
O4': (20.988,150.604,60.509)
C8: (19.448,152.706,59.523)
O2': (23.962,151.199,59.843)
C6: (19.495,154.708,56.642)
C5: (19.613,153.840,57.738)
C4: (20.721,153.014,57.769)
P: (18.984,149.522,64.279)
C4': (21.689,150.877,61.751)
C2': (22.833,152.021,60.018)
C2: (21.472,153.809,55.861)
N1: (20.460,154.665,55.699)
N3: (21.699,152.947,56.851)
N6: (18.492,155.571,56.490)
N7: (18.814,153.630,58.849)
N9: (20.620,152.298,58.936)
O5': (19.954,149.742,63.030)
O3': (23.562,152.321,62.329)
OP2: (18.725,148.063,64.473)
C3': (22.437,152.172,61.476)
C1': (21.593,151.328,59.445)
C5': (20.697,150.973,62.889)
O4': (20.988,150.604,60.509)
C8: (19.448,152.706,59.523)
O2': (23.962,151.199,59.843)
C6: (19.495,154.708,56.642)
C5: (19.613,153.840,57.738)
C4: (20.721,153.014,57.769)
P: (18.984,149.522,64.279)
C4': (21.689,150.877,61.751)
C2': (22.833,152.021,60.018)
C2: (21.472,153.809,55.861)
N1: (20.460,154.665,55.699)
N3: (21.699,152.947,56.851)
N6: (18.492,155.571,56.490)
N7: (18.814,153.630,58.849)
N9: (20.620,152.298,58.936)
O5': (19.954,149.742,63.030)
O3': (23.562,152.321,62.329)
C4: (27.047,154.311,52.317)
N3: (26.088,154.727,53.202)
OP1: (29.136,148.752,52.578)
OP2: (30.362,149.473,54.714)
C2: (25.736,154.132,54.383)
C1': (26.126,152.330,55.981)
C3': (25.412,150.089,55.741)
O5': (27.909,149.127,54.724)
O4': (27.199,151.483,56.351)
C5': (27.755,149.130,56.143)
P: (29.284,148.698,54.053)
C4': (26.701,150.133,56.545)
C2': (24.847,151.485,55.970)
O2': (24.192,151.625,57.217)
N1: (26.444,152.985,54.700)
O4: (27.286,155.003,51.325)
O2: (24.861,154.588,55.095)
C6: (27.411,152.499,53.847)
C5: (27.729,153.106,52.697)
O3': (24.534,149.068,56.212)
N3: (26.088,154.727,53.202)
OP1: (29.136,148.752,52.578)
OP2: (30.362,149.473,54.714)
C2: (25.736,154.132,54.383)
C1': (26.126,152.330,55.981)
C3': (25.412,150.089,55.741)
O5': (27.909,149.127,54.724)
O4': (27.199,151.483,56.351)
C5': (27.755,149.130,56.143)
P: (29.284,148.698,54.053)
C4': (26.701,150.133,56.545)
C2': (24.847,151.485,55.970)
O2': (24.192,151.625,57.217)
N1: (26.444,152.985,54.700)
O4: (27.286,155.003,51.325)
O2: (24.861,154.588,55.095)
C6: (27.411,152.499,53.847)
C5: (27.729,153.106,52.697)
O3': (24.534,149.068,56.212)
Image (generated by PyMOL):