Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3BNS:D4:D3
Extra
PDB:
ATOM 1 O3' U A 3 -19.177 12.601 21.353 1.00 39.49 O
ATOM 2 P C A 4 -19.878 11.177 21.193 1.00 42.21 P
ATOM 3 OP1 C A 4 -18.889 10.115 21.509 1.00 44.45 O
ATOM 4 OP2 C A 4 -20.591 11.155 19.892 1.00 40.68 O
ATOM 5 O5' C A 4 -20.989 11.167 22.330 1.00 40.78 O
ATOM 6 C5' C A 4 -20.644 11.314 23.705 1.00 36.92 C
ATOM 7 C4' C A 4 -21.892 11.603 24.509 1.00 33.28 C
ATOM 8 O4' C A 4 -22.395 12.912 24.141 1.00 32.88 O
ATOM 9 C3' C A 4 -23.050 10.655 24.236 1.00 34.18 C
ATOM 10 O3' C A 4 -22.946 9.516 25.092 1.00 33.81 O
ATOM 11 C2' C A 4 -24.276 11.502 24.586 1.00 32.90 C
ATOM 12 O2' C A 4 -24.638 11.465 25.950 1.00 31.01 O
ATOM 13 C1' C A 4 -23.814 12.914 24.226 1.00 34.05 C
ATOM 14 N1 C A 4 -24.378 13.397 22.949 1.00 35.00 N
ATOM 15 C2 C A 4 -25.633 14.017 22.969 1.00 35.14 C
ATOM 16 O2 C A 4 -26.237 14.110 24.051 1.00 34.45 O
ATOM 17 N3 C A 4 -26.159 14.492 21.813 1.00 34.31 N
ATOM 18 C4 C A 4 -25.486 14.356 20.669 1.00 34.75 C
ATOM 19 N4 C A 4 -26.041 14.854 19.556 1.00 34.88 N
ATOM 20 C5 C A 4 -24.216 13.712 20.612 1.00 35.27 C
ATOM 21 C6 C A 4 -23.700 13.252 21.769 1.00 35.13 C
ATOM 22 P A A 5 -23.109 8.034 24.488 1.00 37.51 P
ATOM 23 OP1 A A 5 -22.166 7.881 23.362 1.00 30.89 O
ATOM 24 OP2 A A 5 -24.559 7.763 24.277 1.00 36.12 O
ATOM 25 O5' A A 5 -22.617 7.098 25.685 1.00 35.17 O
TER
ATOM 1 O3' G B 2 -19.196 15.473 15.932 1.00 38.12 O
ATOM 2 P U B 3 -20.071 14.317 16.652 1.00 38.45 P
ATOM 3 OP1 U B 3 -19.400 13.040 16.406 1.00 35.37 O
ATOM 4 OP2 U B 3 -21.500 14.483 16.275 1.00 35.85 O
ATOM 5 O5' U B 3 -19.958 14.684 18.201 1.00 38.09 O
ATOM 6 C5' U B 3 -18.704 14.622 18.873 1.00 38.43 C
ATOM 7 C4' U B 3 -18.910 14.774 20.356 1.00 35.63 C
ATOM 8 O4' U B 3 -19.504 16.070 20.611 1.00 38.48 O
ATOM 9 C3' U B 3 -19.880 13.781 20.976 1.00 37.32 C
ATOM 10 O3' U B 3 -19.177 12.601 21.353 1.00 39.49 O
ATOM 11 C2' U B 3 -20.355 14.529 22.213 1.00 37.40 C
ATOM 12 O2' U B 3 -19.408 14.424 23.257 1.00 35.76 O
ATOM 13 C1' U B 3 -20.400 15.973 21.702 1.00 37.66 C
ATOM 14 N1 U B 3 -21.729 16.444 21.273 1.00 36.85 N
ATOM 15 C2 U B 3 -22.648 16.737 22.270 1.00 35.74 C
ATOM 16 O2 U B 3 -22.415 16.549 23.455 1.00 34.88 O
ATOM 17 N3 U B 3 -23.848 17.246 21.831 1.00 34.26 N
ATOM 18 C4 U B 3 -24.224 17.472 20.522 1.00 35.72 C
ATOM 19 O4 U B 3 -25.313 18.013 20.290 1.00 36.70 O
ATOM 20 C5 U B 3 -23.241 17.099 19.544 1.00 34.69 C
ATOM 21 C6 U B 3 -22.052 16.612 19.945 1.00 37.17 C
ATOM 22 P C B 4 -19.878 11.177 21.193 1.00 42.21 P
ATOM 23 OP1 C B 4 -18.889 10.115 21.509 1.00 44.45 O
ATOM 24 OP2 C B 4 -20.591 11.155 19.892 1.00 40.68 O
ATOM 25 O5' C B 4 -20.989 11.167 22.330 1.00 40.78 O
TER
ATOM 2 P C A 4 -19.878 11.177 21.193 1.00 42.21 P
ATOM 3 OP1 C A 4 -18.889 10.115 21.509 1.00 44.45 O
ATOM 4 OP2 C A 4 -20.591 11.155 19.892 1.00 40.68 O
ATOM 5 O5' C A 4 -20.989 11.167 22.330 1.00 40.78 O
ATOM 6 C5' C A 4 -20.644 11.314 23.705 1.00 36.92 C
ATOM 7 C4' C A 4 -21.892 11.603 24.509 1.00 33.28 C
ATOM 8 O4' C A 4 -22.395 12.912 24.141 1.00 32.88 O
ATOM 9 C3' C A 4 -23.050 10.655 24.236 1.00 34.18 C
ATOM 10 O3' C A 4 -22.946 9.516 25.092 1.00 33.81 O
ATOM 11 C2' C A 4 -24.276 11.502 24.586 1.00 32.90 C
ATOM 12 O2' C A 4 -24.638 11.465 25.950 1.00 31.01 O
ATOM 13 C1' C A 4 -23.814 12.914 24.226 1.00 34.05 C
ATOM 14 N1 C A 4 -24.378 13.397 22.949 1.00 35.00 N
ATOM 15 C2 C A 4 -25.633 14.017 22.969 1.00 35.14 C
ATOM 16 O2 C A 4 -26.237 14.110 24.051 1.00 34.45 O
ATOM 17 N3 C A 4 -26.159 14.492 21.813 1.00 34.31 N
ATOM 18 C4 C A 4 -25.486 14.356 20.669 1.00 34.75 C
ATOM 19 N4 C A 4 -26.041 14.854 19.556 1.00 34.88 N
ATOM 20 C5 C A 4 -24.216 13.712 20.612 1.00 35.27 C
ATOM 21 C6 C A 4 -23.700 13.252 21.769 1.00 35.13 C
ATOM 22 P A A 5 -23.109 8.034 24.488 1.00 37.51 P
ATOM 23 OP1 A A 5 -22.166 7.881 23.362 1.00 30.89 O
ATOM 24 OP2 A A 5 -24.559 7.763 24.277 1.00 36.12 O
ATOM 25 O5' A A 5 -22.617 7.098 25.685 1.00 35.17 O
TER
ATOM 1 O3' G B 2 -19.196 15.473 15.932 1.00 38.12 O
ATOM 2 P U B 3 -20.071 14.317 16.652 1.00 38.45 P
ATOM 3 OP1 U B 3 -19.400 13.040 16.406 1.00 35.37 O
ATOM 4 OP2 U B 3 -21.500 14.483 16.275 1.00 35.85 O
ATOM 5 O5' U B 3 -19.958 14.684 18.201 1.00 38.09 O
ATOM 6 C5' U B 3 -18.704 14.622 18.873 1.00 38.43 C
ATOM 7 C4' U B 3 -18.910 14.774 20.356 1.00 35.63 C
ATOM 8 O4' U B 3 -19.504 16.070 20.611 1.00 38.48 O
ATOM 9 C3' U B 3 -19.880 13.781 20.976 1.00 37.32 C
ATOM 10 O3' U B 3 -19.177 12.601 21.353 1.00 39.49 O
ATOM 11 C2' U B 3 -20.355 14.529 22.213 1.00 37.40 C
ATOM 12 O2' U B 3 -19.408 14.424 23.257 1.00 35.76 O
ATOM 13 C1' U B 3 -20.400 15.973 21.702 1.00 37.66 C
ATOM 14 N1 U B 3 -21.729 16.444 21.273 1.00 36.85 N
ATOM 15 C2 U B 3 -22.648 16.737 22.270 1.00 35.74 C
ATOM 16 O2 U B 3 -22.415 16.549 23.455 1.00 34.88 O
ATOM 17 N3 U B 3 -23.848 17.246 21.831 1.00 34.26 N
ATOM 18 C4 U B 3 -24.224 17.472 20.522 1.00 35.72 C
ATOM 19 O4 U B 3 -25.313 18.013 20.290 1.00 36.70 O
ATOM 20 C5 U B 3 -23.241 17.099 19.544 1.00 34.69 C
ATOM 21 C6 U B 3 -22.052 16.612 19.945 1.00 37.17 C
ATOM 22 P C B 4 -19.878 11.177 21.193 1.00 42.21 P
ATOM 23 OP1 C B 4 -18.889 10.115 21.509 1.00 44.45 O
ATOM 24 OP2 C B 4 -20.591 11.155 19.892 1.00 40.68 O
ATOM 25 O5' C B 4 -20.989 11.167 22.330 1.00 40.78 O
TER
Atoms:
C2: (-25.633,14.017,22.969)
OP1: (-18.889,10.115,21.509)
OP2: (-20.591,11.155,19.892)
C4: (-25.486,14.356,20.669)
O5': (-20.989,11.167,22.330)
C3': (-23.050,10.655,24.236)
C1': (-23.814,12.914,24.226)
O4': (-22.395,12.912,24.141)
C5': (-20.644,11.314,23.705)
P: (-19.878,11.177,21.193)
O2: (-26.237,14.110,24.051)
C4': (-21.892,11.603,24.509)
C2': (-24.276,11.502,24.586)
O2': (-24.638,11.465,25.950)
N1: (-24.378,13.397,22.949)
N3: (-26.159,14.492,21.813)
N4: (-26.041,14.854,19.556)
C6: (-23.700,13.252,21.769)
C5: (-24.216,13.712,20.612)
O3': (-22.946,9.516,25.092)
OP1: (-18.889,10.115,21.509)
OP2: (-20.591,11.155,19.892)
C4: (-25.486,14.356,20.669)
O5': (-20.989,11.167,22.330)
C3': (-23.050,10.655,24.236)
C1': (-23.814,12.914,24.226)
O4': (-22.395,12.912,24.141)
C5': (-20.644,11.314,23.705)
P: (-19.878,11.177,21.193)
O2: (-26.237,14.110,24.051)
C4': (-21.892,11.603,24.509)
C2': (-24.276,11.502,24.586)
O2': (-24.638,11.465,25.950)
N1: (-24.378,13.397,22.949)
N3: (-26.159,14.492,21.813)
N4: (-26.041,14.854,19.556)
C6: (-23.700,13.252,21.769)
C5: (-24.216,13.712,20.612)
O3': (-22.946,9.516,25.092)
C4: (-24.224,17.472,20.522)
N3: (-23.848,17.246,21.831)
OP1: (-19.400,13.040,16.406)
OP2: (-21.500,14.483,16.275)
C2: (-22.648,16.737,22.270)
C1': (-20.400,15.973,21.702)
C3': (-19.880,13.781,20.976)
O5': (-19.958,14.684,18.201)
O4': (-19.504,16.070,20.611)
C5': (-18.704,14.622,18.873)
P: (-20.071,14.317,16.652)
C4': (-18.910,14.774,20.356)
C2': (-20.355,14.529,22.213)
O2': (-19.408,14.424,23.257)
N1: (-21.729,16.444,21.273)
O4: (-25.313,18.013,20.290)
O2: (-22.415,16.549,23.455)
C6: (-22.052,16.612,19.945)
C5: (-23.241,17.099,19.544)
O3': (-19.177,12.601,21.353)
N3: (-23.848,17.246,21.831)
OP1: (-19.400,13.040,16.406)
OP2: (-21.500,14.483,16.275)
C2: (-22.648,16.737,22.270)
C1': (-20.400,15.973,21.702)
C3': (-19.880,13.781,20.976)
O5': (-19.958,14.684,18.201)
O4': (-19.504,16.070,20.611)
C5': (-18.704,14.622,18.873)
P: (-20.071,14.317,16.652)
C4': (-18.910,14.774,20.356)
C2': (-20.355,14.529,22.213)
O2': (-19.408,14.424,23.257)
N1: (-21.729,16.444,21.273)
O4: (-25.313,18.013,20.290)
O2: (-22.415,16.549,23.455)
C6: (-22.052,16.612,19.945)
C5: (-23.241,17.099,19.544)
O3': (-19.177,12.601,21.353)
Image (generated by PyMOL):