Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DJ0:A35:A34
Extra
PDB:
ATOM 1 O3' U A 34 -2.330 75.968 13.722 1.00 44.79 O
ATOM 2 P C A 35 -3.197 75.557 12.434 1.00 45.30 P
ATOM 3 OP1 C A 35 -3.762 76.799 11.859 1.00 45.43 O
ATOM 4 OP2 C A 35 -4.092 74.438 12.814 1.00 45.27 O
ATOM 5 O5' C A 35 -2.126 74.936 11.422 1.00 45.42 O
ATOM 6 C5' C A 35 -1.022 75.694 10.944 1.00 45.87 C
ATOM 7 C4' C A 35 0.076 74.759 10.481 1.00 46.20 C
ATOM 8 O4' C A 35 0.414 73.828 11.541 1.00 46.25 O
ATOM 9 C3' C A 35 -0.326 73.829 9.352 1.00 46.39 C
ATOM 10 O3' C A 35 -0.294 74.481 8.097 1.00 46.81 O
ATOM 11 C2' C A 35 0.729 72.738 9.477 1.00 46.36 C
ATOM 12 O2' C A 35 1.998 73.107 8.974 1.00 46.43 O
ATOM 13 C1' C A 35 0.776 72.569 10.990 1.00 46.32 C
ATOM 14 N1 C A 35 -0.129 71.457 11.474 1.00 46.44 N
ATOM 15 C2 C A 35 0.250 70.115 11.278 1.00 46.34 C
ATOM 16 O2 C A 35 1.320 69.855 10.713 1.00 46.67 O
ATOM 17 N3 C A 35 -0.568 69.120 11.714 1.00 46.14 N
ATOM 18 C4 C A 35 -1.722 69.415 12.317 1.00 46.15 C
ATOM 19 N4 C A 35 -2.490 68.401 12.725 1.00 46.03 N
ATOM 20 C5 C A 35 -2.134 70.768 12.527 1.00 46.44 C
ATOM 21 C6 C A 35 -1.319 71.742 12.094 1.00 46.51 C
ATOM 22 P C A 36 -1.268 73.959 6.937 1.00 47.36 P
ATOM 23 OP1 C A 36 -1.122 74.876 5.781 1.00 47.08 O
ATOM 24 OP2 C A 36 -2.609 73.742 7.529 1.00 47.20 O
ATOM 25 O5' C A 36 -0.650 72.523 6.568 1.00 47.07 O
TER
ATOM 1 O3' G B 33 -4.478 73.949 19.257 1.00 42.50 O
ATOM 2 P U B 34 -5.094 74.038 17.779 1.00 41.90 P
ATOM 3 OP1 U B 34 -5.958 75.241 17.740 1.00 42.30 O
ATOM 4 OP2 U B 34 -5.658 72.718 17.424 1.00 41.39 O
ATOM 5 O5' U B 34 -3.823 74.281 16.844 1.00 42.13 O
ATOM 6 C5' U B 34 -3.143 75.531 16.841 1.00 42.89 C
ATOM 7 C4' U B 34 -1.831 75.426 16.084 1.00 43.73 C
ATOM 8 O4' U B 34 -0.999 74.408 16.708 1.00 43.92 O
ATOM 9 C3' U B 34 -1.930 74.948 14.639 1.00 44.06 C
ATOM 10 O3' U B 34 -2.330 75.968 13.722 1.00 44.79 O
ATOM 11 C2' U B 34 -0.502 74.474 14.400 1.00 43.73 C
ATOM 12 O2' U B 34 0.402 75.538 14.157 1.00 43.49 O
ATOM 13 C1' U B 34 -0.203 73.765 15.722 1.00 43.43 C
ATOM 14 N1 U B 34 -0.480 72.275 15.671 1.00 43.10 N
ATOM 15 C2 U B 34 0.460 71.428 15.096 1.00 42.89 C
ATOM 16 O2 U B 34 1.520 71.803 14.624 1.00 42.77 O
ATOM 17 N3 U B 34 0.114 70.095 15.090 1.00 42.81 N
ATOM 18 C4 U B 34 -1.048 69.527 15.583 1.00 42.70 C
ATOM 19 O4 U B 34 -1.206 68.314 15.501 1.00 42.74 O
ATOM 20 C5 U B 34 -1.984 70.461 16.162 1.00 42.67 C
ATOM 21 C6 U B 34 -1.667 71.765 16.181 1.00 42.92 C
ATOM 22 P C B 35 -3.197 75.557 12.434 1.00 45.30 P
ATOM 23 OP1 C B 35 -3.762 76.799 11.859 1.00 45.43 O
ATOM 24 OP2 C B 35 -4.092 74.438 12.814 1.00 45.27 O
ATOM 25 O5' C B 35 -2.126 74.936 11.422 1.00 45.42 O
TER
ATOM 2 P C A 35 -3.197 75.557 12.434 1.00 45.30 P
ATOM 3 OP1 C A 35 -3.762 76.799 11.859 1.00 45.43 O
ATOM 4 OP2 C A 35 -4.092 74.438 12.814 1.00 45.27 O
ATOM 5 O5' C A 35 -2.126 74.936 11.422 1.00 45.42 O
ATOM 6 C5' C A 35 -1.022 75.694 10.944 1.00 45.87 C
ATOM 7 C4' C A 35 0.076 74.759 10.481 1.00 46.20 C
ATOM 8 O4' C A 35 0.414 73.828 11.541 1.00 46.25 O
ATOM 9 C3' C A 35 -0.326 73.829 9.352 1.00 46.39 C
ATOM 10 O3' C A 35 -0.294 74.481 8.097 1.00 46.81 O
ATOM 11 C2' C A 35 0.729 72.738 9.477 1.00 46.36 C
ATOM 12 O2' C A 35 1.998 73.107 8.974 1.00 46.43 O
ATOM 13 C1' C A 35 0.776 72.569 10.990 1.00 46.32 C
ATOM 14 N1 C A 35 -0.129 71.457 11.474 1.00 46.44 N
ATOM 15 C2 C A 35 0.250 70.115 11.278 1.00 46.34 C
ATOM 16 O2 C A 35 1.320 69.855 10.713 1.00 46.67 O
ATOM 17 N3 C A 35 -0.568 69.120 11.714 1.00 46.14 N
ATOM 18 C4 C A 35 -1.722 69.415 12.317 1.00 46.15 C
ATOM 19 N4 C A 35 -2.490 68.401 12.725 1.00 46.03 N
ATOM 20 C5 C A 35 -2.134 70.768 12.527 1.00 46.44 C
ATOM 21 C6 C A 35 -1.319 71.742 12.094 1.00 46.51 C
ATOM 22 P C A 36 -1.268 73.959 6.937 1.00 47.36 P
ATOM 23 OP1 C A 36 -1.122 74.876 5.781 1.00 47.08 O
ATOM 24 OP2 C A 36 -2.609 73.742 7.529 1.00 47.20 O
ATOM 25 O5' C A 36 -0.650 72.523 6.568 1.00 47.07 O
TER
ATOM 1 O3' G B 33 -4.478 73.949 19.257 1.00 42.50 O
ATOM 2 P U B 34 -5.094 74.038 17.779 1.00 41.90 P
ATOM 3 OP1 U B 34 -5.958 75.241 17.740 1.00 42.30 O
ATOM 4 OP2 U B 34 -5.658 72.718 17.424 1.00 41.39 O
ATOM 5 O5' U B 34 -3.823 74.281 16.844 1.00 42.13 O
ATOM 6 C5' U B 34 -3.143 75.531 16.841 1.00 42.89 C
ATOM 7 C4' U B 34 -1.831 75.426 16.084 1.00 43.73 C
ATOM 8 O4' U B 34 -0.999 74.408 16.708 1.00 43.92 O
ATOM 9 C3' U B 34 -1.930 74.948 14.639 1.00 44.06 C
ATOM 10 O3' U B 34 -2.330 75.968 13.722 1.00 44.79 O
ATOM 11 C2' U B 34 -0.502 74.474 14.400 1.00 43.73 C
ATOM 12 O2' U B 34 0.402 75.538 14.157 1.00 43.49 O
ATOM 13 C1' U B 34 -0.203 73.765 15.722 1.00 43.43 C
ATOM 14 N1 U B 34 -0.480 72.275 15.671 1.00 43.10 N
ATOM 15 C2 U B 34 0.460 71.428 15.096 1.00 42.89 C
ATOM 16 O2 U B 34 1.520 71.803 14.624 1.00 42.77 O
ATOM 17 N3 U B 34 0.114 70.095 15.090 1.00 42.81 N
ATOM 18 C4 U B 34 -1.048 69.527 15.583 1.00 42.70 C
ATOM 19 O4 U B 34 -1.206 68.314 15.501 1.00 42.74 O
ATOM 20 C5 U B 34 -1.984 70.461 16.162 1.00 42.67 C
ATOM 21 C6 U B 34 -1.667 71.765 16.181 1.00 42.92 C
ATOM 22 P C B 35 -3.197 75.557 12.434 1.00 45.30 P
ATOM 23 OP1 C B 35 -3.762 76.799 11.859 1.00 45.43 O
ATOM 24 OP2 C B 35 -4.092 74.438 12.814 1.00 45.27 O
ATOM 25 O5' C B 35 -2.126 74.936 11.422 1.00 45.42 O
TER
Atoms:
C2: (0.250,70.115,11.278)
OP1: (-3.762,76.799,11.859)
OP2: (-4.092,74.438,12.814)
C4: (-1.722,69.415,12.317)
O5': (-2.126,74.936,11.422)
C3': (-0.326,73.829,9.352)
C1': (0.776,72.569,10.990)
O4': (0.414,73.828,11.541)
C5': (-1.022,75.694,10.944)
P: (-3.197,75.557,12.434)
O2: (1.320,69.855,10.713)
C4': (0.076,74.759,10.481)
C2': (0.729,72.738,9.477)
O2': (1.998,73.107,8.974)
N1: (-0.129,71.457,11.474)
N3: (-0.568,69.120,11.714)
N4: (-2.490,68.401,12.725)
C6: (-1.319,71.742,12.094)
C5: (-2.134,70.768,12.527)
O3': (-0.294,74.481,8.097)
OP1: (-3.762,76.799,11.859)
OP2: (-4.092,74.438,12.814)
C4: (-1.722,69.415,12.317)
O5': (-2.126,74.936,11.422)
C3': (-0.326,73.829,9.352)
C1': (0.776,72.569,10.990)
O4': (0.414,73.828,11.541)
C5': (-1.022,75.694,10.944)
P: (-3.197,75.557,12.434)
O2: (1.320,69.855,10.713)
C4': (0.076,74.759,10.481)
C2': (0.729,72.738,9.477)
O2': (1.998,73.107,8.974)
N1: (-0.129,71.457,11.474)
N3: (-0.568,69.120,11.714)
N4: (-2.490,68.401,12.725)
C6: (-1.319,71.742,12.094)
C5: (-2.134,70.768,12.527)
O3': (-0.294,74.481,8.097)
C4: (-1.048,69.527,15.583)
N3: (0.114,70.095,15.090)
OP1: (-5.958,75.241,17.740)
OP2: (-5.658,72.718,17.424)
C2: (0.460,71.428,15.096)
C1': (-0.203,73.765,15.722)
C3': (-1.930,74.948,14.639)
O5': (-3.823,74.281,16.844)
O4': (-0.999,74.408,16.708)
C5': (-3.143,75.531,16.841)
P: (-5.094,74.038,17.779)
C4': (-1.831,75.426,16.084)
C2': (-0.502,74.474,14.400)
O2': (0.402,75.538,14.157)
N1: (-0.480,72.275,15.671)
O4: (-1.206,68.314,15.501)
O2: (1.520,71.803,14.624)
C6: (-1.667,71.765,16.181)
C5: (-1.984,70.461,16.162)
O3': (-2.330,75.968,13.722)
N3: (0.114,70.095,15.090)
OP1: (-5.958,75.241,17.740)
OP2: (-5.658,72.718,17.424)
C2: (0.460,71.428,15.096)
C1': (-0.203,73.765,15.722)
C3': (-1.930,74.948,14.639)
O5': (-3.823,74.281,16.844)
O4': (-0.999,74.408,16.708)
C5': (-3.143,75.531,16.841)
P: (-5.094,74.038,17.779)
C4': (-1.831,75.426,16.084)
C2': (-0.502,74.474,14.400)
O2': (0.402,75.538,14.157)
N1: (-0.480,72.275,15.671)
O4: (-1.206,68.314,15.501)
O2: (1.520,71.803,14.624)
C6: (-1.667,71.765,16.181)
C5: (-1.984,70.461,16.162)
O3': (-2.330,75.968,13.722)
Image (generated by PyMOL):