Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1812:A1813
Extra
PDB:
ATOM 1 O3' C A1811 117.098 118.278 65.934 1.00 43.77 O
ATOM 2 P C A1812 118.619 118.255 65.424 1.00 44.06 P
ATOM 3 OP1 C A1812 118.800 117.039 64.593 1.00 44.48 O
ATOM 4 OP2 C A1812 119.519 118.488 66.583 1.00 44.38 O
ATOM 5 O5' C A1812 118.683 119.506 64.442 1.00 43.06 O
ATOM 6 C5' C A1812 117.909 119.508 63.226 1.00 42.81 C
ATOM 7 C4' C A1812 117.714 120.916 62.716 1.00 42.49 C
ATOM 8 O4' C A1812 117.220 121.763 63.785 1.00 40.30 O
ATOM 9 C3' C A1812 118.961 121.656 62.269 1.00 42.96 C
ATOM 10 O3' C A1812 119.415 121.246 60.989 1.00 47.22 O
ATOM 11 C2' C A1812 118.486 123.100 62.294 1.00 40.61 C
ATOM 12 O2' C A1812 117.636 123.432 61.213 1.00 36.86 O
ATOM 13 C1' C A1812 117.671 123.094 63.583 1.00 39.18 C
ATOM 14 N1 C A1812 118.419 123.528 64.780 1.00 37.62 N
ATOM 15 C2 C A1812 118.520 124.906 65.054 1.00 38.04 C
ATOM 16 O2 C A1812 118.101 125.716 64.225 1.00 38.34 O
ATOM 17 N3 C A1812 119.089 125.310 66.206 1.00 38.50 N
ATOM 18 C4 C A1812 119.591 124.406 67.054 1.00 39.83 C
ATOM 19 N4 C A1812 120.121 124.840 68.212 1.00 40.83 N
ATOM 20 C5 C A1812 119.568 123.012 66.766 1.00 37.72 C
ATOM 21 C6 C A1812 118.975 122.619 65.632 1.00 37.01 C
ATOM 22 P G A1813 120.973 121.366 60.634 1.00 48.11 P
ATOM 23 OP1 G A1813 121.151 120.624 59.370 1.00 47.38 O
ATOM 24 OP2 G A1813 121.743 120.950 61.846 1.00 47.81 O
ATOM 25 O5' G A1813 121.188 122.923 60.333 1.00 47.01 O
TER
ATOM 1 O3' C B1812 119.415 121.246 60.989 1.00 47.22 O
ATOM 2 P G B1813 120.973 121.366 60.634 1.00 48.11 P
ATOM 3 OP1 G B1813 121.151 120.624 59.370 1.00 47.38 O
ATOM 4 OP2 G B1813 121.743 120.950 61.846 1.00 47.81 O
ATOM 5 O5' G B1813 121.188 122.923 60.333 1.00 47.01 O
ATOM 6 C5' G B1813 120.459 123.584 59.275 1.00 47.40 C
ATOM 7 C4' G B1813 121.416 124.310 58.347 1.00 48.24 C
ATOM 8 O4' G B1813 122.087 125.367 59.083 1.00 48.52 O
ATOM 9 C3' G B1813 122.536 123.481 57.718 1.00 49.28 C
ATOM 10 O3' G B1813 122.906 124.032 56.461 1.00 49.47 O
ATOM 11 C2' G B1813 123.701 123.753 58.649 1.00 48.70 C
ATOM 12 O2' G B1813 124.952 123.523 58.040 1.00 50.45 O
ATOM 13 C1' G B1813 123.482 125.233 58.938 1.00 47.48 C
ATOM 14 N9 G B1813 124.111 125.738 60.152 1.00 46.40 N
ATOM 15 C8 G B1813 124.819 125.028 61.089 1.00 45.74 C
ATOM 16 N7 G B1813 125.262 125.770 62.064 1.00 45.59 N
ATOM 17 C5 G B1813 124.821 127.047 61.756 1.00 45.38 C
ATOM 18 C6 G B1813 125.006 128.267 62.447 1.00 45.96 C
ATOM 19 O6 G B1813 125.617 128.470 63.508 1.00 45.83 O
ATOM 20 N1 G B1813 124.400 129.326 61.782 1.00 47.13 N
ATOM 21 C2 G B1813 123.708 129.222 60.597 1.00 47.03 C
ATOM 22 N2 G B1813 123.218 130.357 60.093 1.00 47.53 N
ATOM 23 N3 G B1813 123.519 128.086 59.949 1.00 46.95 N
ATOM 24 C4 G B1813 124.105 127.046 60.579 1.00 46.31 C
ATOM 25 P C B1814 121.964 123.803 55.191 1.00 50.89 P
ATOM 26 OP1 C B1814 121.274 122.493 55.376 1.00 48.77 O
ATOM 27 OP2 C B1814 122.739 124.047 53.957 1.00 51.02 O
ATOM 28 O5' C B1814 120.905 124.978 55.345 1.00 51.47 O
TER
ATOM 2 P C A1812 118.619 118.255 65.424 1.00 44.06 P
ATOM 3 OP1 C A1812 118.800 117.039 64.593 1.00 44.48 O
ATOM 4 OP2 C A1812 119.519 118.488 66.583 1.00 44.38 O
ATOM 5 O5' C A1812 118.683 119.506 64.442 1.00 43.06 O
ATOM 6 C5' C A1812 117.909 119.508 63.226 1.00 42.81 C
ATOM 7 C4' C A1812 117.714 120.916 62.716 1.00 42.49 C
ATOM 8 O4' C A1812 117.220 121.763 63.785 1.00 40.30 O
ATOM 9 C3' C A1812 118.961 121.656 62.269 1.00 42.96 C
ATOM 10 O3' C A1812 119.415 121.246 60.989 1.00 47.22 O
ATOM 11 C2' C A1812 118.486 123.100 62.294 1.00 40.61 C
ATOM 12 O2' C A1812 117.636 123.432 61.213 1.00 36.86 O
ATOM 13 C1' C A1812 117.671 123.094 63.583 1.00 39.18 C
ATOM 14 N1 C A1812 118.419 123.528 64.780 1.00 37.62 N
ATOM 15 C2 C A1812 118.520 124.906 65.054 1.00 38.04 C
ATOM 16 O2 C A1812 118.101 125.716 64.225 1.00 38.34 O
ATOM 17 N3 C A1812 119.089 125.310 66.206 1.00 38.50 N
ATOM 18 C4 C A1812 119.591 124.406 67.054 1.00 39.83 C
ATOM 19 N4 C A1812 120.121 124.840 68.212 1.00 40.83 N
ATOM 20 C5 C A1812 119.568 123.012 66.766 1.00 37.72 C
ATOM 21 C6 C A1812 118.975 122.619 65.632 1.00 37.01 C
ATOM 22 P G A1813 120.973 121.366 60.634 1.00 48.11 P
ATOM 23 OP1 G A1813 121.151 120.624 59.370 1.00 47.38 O
ATOM 24 OP2 G A1813 121.743 120.950 61.846 1.00 47.81 O
ATOM 25 O5' G A1813 121.188 122.923 60.333 1.00 47.01 O
TER
ATOM 1 O3' C B1812 119.415 121.246 60.989 1.00 47.22 O
ATOM 2 P G B1813 120.973 121.366 60.634 1.00 48.11 P
ATOM 3 OP1 G B1813 121.151 120.624 59.370 1.00 47.38 O
ATOM 4 OP2 G B1813 121.743 120.950 61.846 1.00 47.81 O
ATOM 5 O5' G B1813 121.188 122.923 60.333 1.00 47.01 O
ATOM 6 C5' G B1813 120.459 123.584 59.275 1.00 47.40 C
ATOM 7 C4' G B1813 121.416 124.310 58.347 1.00 48.24 C
ATOM 8 O4' G B1813 122.087 125.367 59.083 1.00 48.52 O
ATOM 9 C3' G B1813 122.536 123.481 57.718 1.00 49.28 C
ATOM 10 O3' G B1813 122.906 124.032 56.461 1.00 49.47 O
ATOM 11 C2' G B1813 123.701 123.753 58.649 1.00 48.70 C
ATOM 12 O2' G B1813 124.952 123.523 58.040 1.00 50.45 O
ATOM 13 C1' G B1813 123.482 125.233 58.938 1.00 47.48 C
ATOM 14 N9 G B1813 124.111 125.738 60.152 1.00 46.40 N
ATOM 15 C8 G B1813 124.819 125.028 61.089 1.00 45.74 C
ATOM 16 N7 G B1813 125.262 125.770 62.064 1.00 45.59 N
ATOM 17 C5 G B1813 124.821 127.047 61.756 1.00 45.38 C
ATOM 18 C6 G B1813 125.006 128.267 62.447 1.00 45.96 C
ATOM 19 O6 G B1813 125.617 128.470 63.508 1.00 45.83 O
ATOM 20 N1 G B1813 124.400 129.326 61.782 1.00 47.13 N
ATOM 21 C2 G B1813 123.708 129.222 60.597 1.00 47.03 C
ATOM 22 N2 G B1813 123.218 130.357 60.093 1.00 47.53 N
ATOM 23 N3 G B1813 123.519 128.086 59.949 1.00 46.95 N
ATOM 24 C4 G B1813 124.105 127.046 60.579 1.00 46.31 C
ATOM 25 P C B1814 121.964 123.803 55.191 1.00 50.89 P
ATOM 26 OP1 C B1814 121.274 122.493 55.376 1.00 48.77 O
ATOM 27 OP2 C B1814 122.739 124.047 53.957 1.00 51.02 O
ATOM 28 O5' C B1814 120.905 124.978 55.345 1.00 51.47 O
TER
Atoms:
C2: (118.520,124.906,65.054)
OP1: (118.800,117.039,64.593)
OP2: (119.519,118.488,66.583)
C4: (119.591,124.406,67.054)
O5': (118.683,119.506,64.442)
C3': (118.961,121.656,62.269)
C1': (117.671,123.094,63.583)
O4': (117.220,121.763,63.785)
C5': (117.909,119.508,63.226)
P: (118.619,118.255,65.424)
O2: (118.101,125.716,64.225)
C4': (117.714,120.916,62.716)
C2': (118.486,123.100,62.294)
O2': (117.636,123.432,61.213)
N1: (118.419,123.528,64.780)
N3: (119.089,125.310,66.206)
N4: (120.121,124.840,68.212)
C6: (118.975,122.619,65.632)
C5: (119.568,123.012,66.766)
O3': (119.415,121.246,60.989)
OP1: (118.800,117.039,64.593)
OP2: (119.519,118.488,66.583)
C4: (119.591,124.406,67.054)
O5': (118.683,119.506,64.442)
C3': (118.961,121.656,62.269)
C1': (117.671,123.094,63.583)
O4': (117.220,121.763,63.785)
C5': (117.909,119.508,63.226)
P: (118.619,118.255,65.424)
O2: (118.101,125.716,64.225)
C4': (117.714,120.916,62.716)
C2': (118.486,123.100,62.294)
O2': (117.636,123.432,61.213)
N1: (118.419,123.528,64.780)
N3: (119.089,125.310,66.206)
N4: (120.121,124.840,68.212)
C6: (118.975,122.619,65.632)
C5: (119.568,123.012,66.766)
O3': (119.415,121.246,60.989)
OP1: (121.151,120.624,59.370)
OP2: (121.743,120.950,61.846)
C3': (122.536,123.481,57.718)
C1': (123.482,125.233,58.938)
C5': (120.459,123.584,59.275)
O6: (125.617,128.470,63.508)
O4': (122.087,125.367,59.083)
C8: (124.819,125.028,61.089)
C2: (123.708,129.222,60.597)
C6: (125.006,128.267,62.447)
C5: (124.821,127.047,61.756)
C4: (124.105,127.046,60.579)
P: (120.973,121.366,60.634)
C4': (121.416,124.310,58.347)
C2': (123.701,123.753,58.649)
O2': (124.952,123.523,58.040)
N1: (124.400,129.326,61.782)
N2: (123.218,130.357,60.093)
N3: (123.519,128.086,59.949)
N7: (125.262,125.770,62.064)
N9: (124.111,125.738,60.152)
O5': (121.188,122.923,60.333)
O3': (122.906,124.032,56.461)
OP2: (121.743,120.950,61.846)
C3': (122.536,123.481,57.718)
C1': (123.482,125.233,58.938)
C5': (120.459,123.584,59.275)
O6: (125.617,128.470,63.508)
O4': (122.087,125.367,59.083)
C8: (124.819,125.028,61.089)
C2: (123.708,129.222,60.597)
C6: (125.006,128.267,62.447)
C5: (124.821,127.047,61.756)
C4: (124.105,127.046,60.579)
P: (120.973,121.366,60.634)
C4': (121.416,124.310,58.347)
C2': (123.701,123.753,58.649)
O2': (124.952,123.523,58.040)
N1: (124.400,129.326,61.782)
N2: (123.218,130.357,60.093)
N3: (123.519,128.086,59.949)
N7: (125.262,125.770,62.064)
N9: (124.111,125.738,60.152)
O5': (121.188,122.923,60.333)
O3': (122.906,124.032,56.461)
Image (generated by PyMOL):