Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5K:E81:E80
Extra
PDB:
ATOM 1 O3' U A 80 -32.263 11.914 120.961 1.00155.47 O
ATOM 2 P C A 81 -30.857 12.690 120.985 1.00160.24 P
ATOM 3 OP1 C A 81 -30.220 12.546 119.650 1.00159.76 O
ATOM 4 OP2 C A 81 -30.127 12.239 122.199 1.00155.58 O
ATOM 5 O5' C A 81 -31.265 14.217 121.198 1.00151.28 O
ATOM 6 C5' C A 81 -31.972 14.934 120.188 1.00145.81 C
ATOM 7 C4' C A 81 -32.193 16.367 120.617 1.00141.33 C
ATOM 8 O4' C A 81 -33.029 16.388 121.806 1.00135.59 O
ATOM 9 C3' C A 81 -30.945 17.135 121.026 1.00141.72 C
ATOM 10 O3' C A 81 -30.266 17.686 119.905 1.00143.24 O
ATOM 11 C2' C A 81 -31.524 18.218 121.928 1.00137.04 C
ATOM 12 O2' C A 81 -32.104 19.293 121.215 1.00129.40 O
ATOM 13 C1' C A 81 -32.603 17.430 122.671 1.00131.05 C
ATOM 14 N1 C A 81 -32.078 16.817 123.899 1.00126.29 N
ATOM 15 C2 C A 81 -31.836 17.632 125.010 1.00123.62 C
ATOM 16 O2 C A 81 -32.080 18.848 124.929 1.00118.84 O
ATOM 17 N3 C A 81 -31.343 17.076 126.142 1.00123.50 N
ATOM 18 C4 C A 81 -31.094 15.763 126.187 1.00125.18 C
ATOM 19 N4 C A 81 -30.607 15.257 127.324 1.00125.56 N
ATOM 20 C5 C A 81 -31.333 14.911 125.070 1.00123.91 C
ATOM 21 C6 C A 81 -31.822 15.474 123.957 1.00124.36 C
ATOM 22 P G A 82 -28.695 18.013 120.010 1.00140.49 P
ATOM 23 OP1 G A 82 -28.223 18.455 118.673 1.00147.34 O
ATOM 24 OP2 G A 82 -28.043 16.854 120.674 1.00134.57 O
ATOM 25 O5' G A 82 -28.624 19.260 120.998 1.00124.31 O
TER
ATOM 1 O3' U B 79 -33.612 7.199 124.972 1.00158.32 O
ATOM 2 P U B 80 -32.359 7.952 124.306 1.00159.74 P
ATOM 3 OP1 U B 80 -31.865 7.124 123.175 1.00155.55 O
ATOM 4 OP2 U B 80 -31.432 8.319 125.407 1.00158.03 O
ATOM 5 O5' U B 80 -32.981 9.294 123.710 1.00157.05 O
ATOM 6 C5' U B 80 -33.583 9.313 122.416 1.00153.72 C
ATOM 7 C4' U B 80 -34.066 10.707 122.080 1.00153.32 C
ATOM 8 O4' U B 80 -35.071 11.107 123.052 1.00155.02 O
ATOM 9 C3' U B 80 -33.023 11.811 122.156 1.00153.37 C
ATOM 10 O3' U B 80 -32.263 11.914 120.961 1.00155.47 O
ATOM 11 C2' U B 80 -33.884 13.044 122.381 1.00151.20 C
ATOM 12 O2' U B 80 -34.504 13.510 121.199 1.00151.19 O
ATOM 13 C1' U B 80 -34.935 12.490 123.343 1.00148.76 C
ATOM 14 N1 U B 80 -34.505 12.620 124.741 1.00143.64 N
ATOM 15 C2 U B 80 -34.755 13.815 125.383 1.00141.85 C
ATOM 16 O2 U B 80 -35.323 14.750 124.845 1.00139.80 O
ATOM 17 N3 U B 80 -34.313 13.875 126.679 1.00140.96 N
ATOM 18 C4 U B 80 -33.659 12.884 127.382 1.00141.63 C
ATOM 19 O4 U B 80 -33.321 13.093 128.548 1.00141.52 O
ATOM 20 C5 U B 80 -33.441 11.677 126.649 1.00140.74 C
ATOM 21 C6 U B 80 -33.863 11.588 125.386 1.00141.76 C
ATOM 22 P C B 81 -30.857 12.690 120.985 1.00160.24 P
ATOM 23 OP1 C B 81 -30.220 12.546 119.650 1.00159.76 O
ATOM 24 OP2 C B 81 -30.127 12.239 122.199 1.00155.58 O
ATOM 25 O5' C B 81 -31.265 14.217 121.198 1.00151.28 O
TER
ATOM 2 P C A 81 -30.857 12.690 120.985 1.00160.24 P
ATOM 3 OP1 C A 81 -30.220 12.546 119.650 1.00159.76 O
ATOM 4 OP2 C A 81 -30.127 12.239 122.199 1.00155.58 O
ATOM 5 O5' C A 81 -31.265 14.217 121.198 1.00151.28 O
ATOM 6 C5' C A 81 -31.972 14.934 120.188 1.00145.81 C
ATOM 7 C4' C A 81 -32.193 16.367 120.617 1.00141.33 C
ATOM 8 O4' C A 81 -33.029 16.388 121.806 1.00135.59 O
ATOM 9 C3' C A 81 -30.945 17.135 121.026 1.00141.72 C
ATOM 10 O3' C A 81 -30.266 17.686 119.905 1.00143.24 O
ATOM 11 C2' C A 81 -31.524 18.218 121.928 1.00137.04 C
ATOM 12 O2' C A 81 -32.104 19.293 121.215 1.00129.40 O
ATOM 13 C1' C A 81 -32.603 17.430 122.671 1.00131.05 C
ATOM 14 N1 C A 81 -32.078 16.817 123.899 1.00126.29 N
ATOM 15 C2 C A 81 -31.836 17.632 125.010 1.00123.62 C
ATOM 16 O2 C A 81 -32.080 18.848 124.929 1.00118.84 O
ATOM 17 N3 C A 81 -31.343 17.076 126.142 1.00123.50 N
ATOM 18 C4 C A 81 -31.094 15.763 126.187 1.00125.18 C
ATOM 19 N4 C A 81 -30.607 15.257 127.324 1.00125.56 N
ATOM 20 C5 C A 81 -31.333 14.911 125.070 1.00123.91 C
ATOM 21 C6 C A 81 -31.822 15.474 123.957 1.00124.36 C
ATOM 22 P G A 82 -28.695 18.013 120.010 1.00140.49 P
ATOM 23 OP1 G A 82 -28.223 18.455 118.673 1.00147.34 O
ATOM 24 OP2 G A 82 -28.043 16.854 120.674 1.00134.57 O
ATOM 25 O5' G A 82 -28.624 19.260 120.998 1.00124.31 O
TER
ATOM 1 O3' U B 79 -33.612 7.199 124.972 1.00158.32 O
ATOM 2 P U B 80 -32.359 7.952 124.306 1.00159.74 P
ATOM 3 OP1 U B 80 -31.865 7.124 123.175 1.00155.55 O
ATOM 4 OP2 U B 80 -31.432 8.319 125.407 1.00158.03 O
ATOM 5 O5' U B 80 -32.981 9.294 123.710 1.00157.05 O
ATOM 6 C5' U B 80 -33.583 9.313 122.416 1.00153.72 C
ATOM 7 C4' U B 80 -34.066 10.707 122.080 1.00153.32 C
ATOM 8 O4' U B 80 -35.071 11.107 123.052 1.00155.02 O
ATOM 9 C3' U B 80 -33.023 11.811 122.156 1.00153.37 C
ATOM 10 O3' U B 80 -32.263 11.914 120.961 1.00155.47 O
ATOM 11 C2' U B 80 -33.884 13.044 122.381 1.00151.20 C
ATOM 12 O2' U B 80 -34.504 13.510 121.199 1.00151.19 O
ATOM 13 C1' U B 80 -34.935 12.490 123.343 1.00148.76 C
ATOM 14 N1 U B 80 -34.505 12.620 124.741 1.00143.64 N
ATOM 15 C2 U B 80 -34.755 13.815 125.383 1.00141.85 C
ATOM 16 O2 U B 80 -35.323 14.750 124.845 1.00139.80 O
ATOM 17 N3 U B 80 -34.313 13.875 126.679 1.00140.96 N
ATOM 18 C4 U B 80 -33.659 12.884 127.382 1.00141.63 C
ATOM 19 O4 U B 80 -33.321 13.093 128.548 1.00141.52 O
ATOM 20 C5 U B 80 -33.441 11.677 126.649 1.00140.74 C
ATOM 21 C6 U B 80 -33.863 11.588 125.386 1.00141.76 C
ATOM 22 P C B 81 -30.857 12.690 120.985 1.00160.24 P
ATOM 23 OP1 C B 81 -30.220 12.546 119.650 1.00159.76 O
ATOM 24 OP2 C B 81 -30.127 12.239 122.199 1.00155.58 O
ATOM 25 O5' C B 81 -31.265 14.217 121.198 1.00151.28 O
TER
Atoms:
C2: (-31.836,17.632,125.010)
OP1: (-30.220,12.546,119.650)
OP2: (-30.127,12.239,122.199)
C4: (-31.094,15.763,126.187)
O5': (-31.265,14.217,121.198)
C3': (-30.945,17.135,121.026)
C1': (-32.603,17.430,122.671)
O4': (-33.029,16.388,121.806)
C5': (-31.972,14.934,120.188)
P: (-30.857,12.690,120.985)
O2: (-32.080,18.848,124.929)
C4': (-32.193,16.367,120.617)
C2': (-31.524,18.218,121.928)
O2': (-32.104,19.293,121.215)
N1: (-32.078,16.817,123.899)
N3: (-31.343,17.076,126.142)
N4: (-30.607,15.257,127.324)
C6: (-31.822,15.474,123.957)
C5: (-31.333,14.911,125.070)
O3': (-30.266,17.686,119.905)
OP1: (-30.220,12.546,119.650)
OP2: (-30.127,12.239,122.199)
C4: (-31.094,15.763,126.187)
O5': (-31.265,14.217,121.198)
C3': (-30.945,17.135,121.026)
C1': (-32.603,17.430,122.671)
O4': (-33.029,16.388,121.806)
C5': (-31.972,14.934,120.188)
P: (-30.857,12.690,120.985)
O2: (-32.080,18.848,124.929)
C4': (-32.193,16.367,120.617)
C2': (-31.524,18.218,121.928)
O2': (-32.104,19.293,121.215)
N1: (-32.078,16.817,123.899)
N3: (-31.343,17.076,126.142)
N4: (-30.607,15.257,127.324)
C6: (-31.822,15.474,123.957)
C5: (-31.333,14.911,125.070)
O3': (-30.266,17.686,119.905)
C4: (-33.659,12.884,127.382)
N3: (-34.313,13.875,126.679)
OP1: (-31.865,7.124,123.175)
OP2: (-31.432,8.319,125.407)
C2: (-34.755,13.815,125.383)
C1': (-34.935,12.490,123.343)
C3': (-33.023,11.811,122.156)
O5': (-32.981,9.294,123.710)
O4': (-35.071,11.107,123.052)
C5': (-33.583,9.313,122.416)
P: (-32.359,7.952,124.306)
C4': (-34.066,10.707,122.080)
C2': (-33.884,13.044,122.381)
O2': (-34.504,13.510,121.199)
N1: (-34.505,12.620,124.741)
O4: (-33.321,13.093,128.548)
O2: (-35.323,14.750,124.845)
C6: (-33.863,11.588,125.386)
C5: (-33.441,11.677,126.649)
O3': (-32.263,11.914,120.961)
N3: (-34.313,13.875,126.679)
OP1: (-31.865,7.124,123.175)
OP2: (-31.432,8.319,125.407)
C2: (-34.755,13.815,125.383)
C1': (-34.935,12.490,123.343)
C3': (-33.023,11.811,122.156)
O5': (-32.981,9.294,123.710)
O4': (-35.071,11.107,123.052)
C5': (-33.583,9.313,122.416)
P: (-32.359,7.952,124.306)
C4': (-34.066,10.707,122.080)
C2': (-33.884,13.044,122.381)
O2': (-34.504,13.510,121.199)
N1: (-34.505,12.620,124.741)
O4: (-33.321,13.093,128.548)
O2: (-35.323,14.750,124.845)
C6: (-33.863,11.588,125.386)
C5: (-33.441,11.677,126.649)
O3': (-32.263,11.914,120.961)
Image (generated by PyMOL):