Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0418:0370
Extra
PDB:
ATOM 1 O3' A A 417 82.464 103.250 19.255 1.00 43.49 O
ATOM 2 P A A 418 82.836 104.519 18.345 1.00 45.64 P
ATOM 3 OP1 A A 418 81.897 105.615 18.717 1.00 44.50 O
ATOM 4 OP2 A A 418 82.949 104.102 16.917 1.00 44.20 O
ATOM 5 O5' A A 418 84.285 104.908 18.868 1.00 43.55 O
ATOM 6 C5' A A 418 84.462 105.387 20.201 1.00 41.08 C
ATOM 7 C4' A A 418 85.874 105.155 20.643 1.00 41.13 C
ATOM 8 O4' A A 418 86.151 103.733 20.604 1.00 42.23 O
ATOM 9 C3' A A 418 86.950 105.746 19.755 1.00 39.58 C
ATOM 10 O3' A A 418 87.131 107.126 20.020 1.00 41.40 O
ATOM 11 C2' A A 418 88.159 104.911 20.148 1.00 39.86 C
ATOM 12 O2' A A 418 88.706 105.291 21.391 1.00 37.12 O
ATOM 13 C1' A A 418 87.519 103.527 20.294 1.00 40.71 C
ATOM 14 N9 A A 418 87.598 102.766 19.050 1.00 40.97 N
ATOM 15 C8 A A 418 86.707 102.742 18.005 1.00 41.49 C
ATOM 16 N7 A A 418 87.091 101.991 17.002 1.00 42.72 N
ATOM 17 C5 A A 418 88.311 101.478 17.421 1.00 41.63 C
ATOM 18 C6 A A 418 89.233 100.622 16.808 1.00 42.29 C
ATOM 19 N6 A A 418 89.067 100.112 15.587 1.00 44.25 N
ATOM 20 N1 A A 418 90.351 100.305 17.497 1.00 42.40 N
ATOM 21 C2 A A 418 90.520 100.824 18.718 1.00 41.86 C
ATOM 22 N3 A A 418 89.727 101.645 19.397 1.00 42.32 N
ATOM 23 C4 A A 418 88.627 101.937 18.685 1.00 40.64 C
ATOM 24 P G A 419 87.468 108.133 18.813 1.00 40.78 P
ATOM 25 OP1 G A 419 88.721 107.686 18.160 1.00 40.05 O
ATOM 26 OP2 G A 419 87.383 109.502 19.366 1.00 39.74 O
ATOM 27 O5' G A 419 86.264 107.938 17.795 1.00 36.42 O
TER
ATOM 1 O3' G B 369 94.234 104.313 25.702 1.00 43.83 O
ATOM 2 P U B 370 93.348 103.934 27.004 1.00 45.60 P
ATOM 3 OP1 U B 370 92.911 105.138 27.755 1.00 46.22 O
ATOM 4 OP2 U B 370 94.046 102.835 27.728 1.00 42.86 O
ATOM 5 O5' U B 370 92.044 103.297 26.360 1.00 41.64 O
ATOM 6 C5' U B 370 91.105 104.115 25.652 1.00 41.88 C
ATOM 7 C4' U B 370 90.657 103.415 24.395 1.00 44.86 C
ATOM 8 O4' U B 370 91.748 103.388 23.442 1.00 46.52 O
ATOM 9 C3' U B 370 90.276 101.955 24.569 1.00 45.90 C
ATOM 10 O3' U B 370 88.940 101.828 25.046 1.00 47.13 O
ATOM 11 C2' U B 370 90.472 101.393 23.166 1.00 44.78 C
ATOM 12 O2' U B 370 89.385 101.663 22.301 1.00 45.39 O
ATOM 13 C1' U B 370 91.697 102.184 22.693 1.00 43.43 C
ATOM 14 N1 U B 370 92.985 101.490 22.837 1.00 40.47 N
ATOM 15 C2 U B 370 93.200 100.364 22.063 1.00 40.46 C
ATOM 16 O2 U B 370 92.378 99.946 21.257 1.00 39.55 O
ATOM 17 N3 U B 370 94.419 99.753 22.252 1.00 40.28 N
ATOM 18 C4 U B 370 95.432 100.159 23.098 1.00 41.11 C
ATOM 19 O4 U B 370 96.482 99.514 23.142 1.00 39.66 O
ATOM 20 C5 U B 370 95.140 101.342 23.851 1.00 41.78 C
ATOM 21 C6 U B 370 93.955 101.946 23.704 1.00 41.42 C
ATOM 22 P A B 371 88.610 100.774 26.210 1.00 47.61 P
ATOM 23 OP1 A B 371 87.189 100.977 26.576 1.00 47.69 O
ATOM 24 OP2 A B 371 89.663 100.848 27.261 1.00 44.47 O
ATOM 25 O5' A B 371 88.743 99.370 25.482 1.00 46.04 O
TER
ATOM 2 P A A 418 82.836 104.519 18.345 1.00 45.64 P
ATOM 3 OP1 A A 418 81.897 105.615 18.717 1.00 44.50 O
ATOM 4 OP2 A A 418 82.949 104.102 16.917 1.00 44.20 O
ATOM 5 O5' A A 418 84.285 104.908 18.868 1.00 43.55 O
ATOM 6 C5' A A 418 84.462 105.387 20.201 1.00 41.08 C
ATOM 7 C4' A A 418 85.874 105.155 20.643 1.00 41.13 C
ATOM 8 O4' A A 418 86.151 103.733 20.604 1.00 42.23 O
ATOM 9 C3' A A 418 86.950 105.746 19.755 1.00 39.58 C
ATOM 10 O3' A A 418 87.131 107.126 20.020 1.00 41.40 O
ATOM 11 C2' A A 418 88.159 104.911 20.148 1.00 39.86 C
ATOM 12 O2' A A 418 88.706 105.291 21.391 1.00 37.12 O
ATOM 13 C1' A A 418 87.519 103.527 20.294 1.00 40.71 C
ATOM 14 N9 A A 418 87.598 102.766 19.050 1.00 40.97 N
ATOM 15 C8 A A 418 86.707 102.742 18.005 1.00 41.49 C
ATOM 16 N7 A A 418 87.091 101.991 17.002 1.00 42.72 N
ATOM 17 C5 A A 418 88.311 101.478 17.421 1.00 41.63 C
ATOM 18 C6 A A 418 89.233 100.622 16.808 1.00 42.29 C
ATOM 19 N6 A A 418 89.067 100.112 15.587 1.00 44.25 N
ATOM 20 N1 A A 418 90.351 100.305 17.497 1.00 42.40 N
ATOM 21 C2 A A 418 90.520 100.824 18.718 1.00 41.86 C
ATOM 22 N3 A A 418 89.727 101.645 19.397 1.00 42.32 N
ATOM 23 C4 A A 418 88.627 101.937 18.685 1.00 40.64 C
ATOM 24 P G A 419 87.468 108.133 18.813 1.00 40.78 P
ATOM 25 OP1 G A 419 88.721 107.686 18.160 1.00 40.05 O
ATOM 26 OP2 G A 419 87.383 109.502 19.366 1.00 39.74 O
ATOM 27 O5' G A 419 86.264 107.938 17.795 1.00 36.42 O
TER
ATOM 1 O3' G B 369 94.234 104.313 25.702 1.00 43.83 O
ATOM 2 P U B 370 93.348 103.934 27.004 1.00 45.60 P
ATOM 3 OP1 U B 370 92.911 105.138 27.755 1.00 46.22 O
ATOM 4 OP2 U B 370 94.046 102.835 27.728 1.00 42.86 O
ATOM 5 O5' U B 370 92.044 103.297 26.360 1.00 41.64 O
ATOM 6 C5' U B 370 91.105 104.115 25.652 1.00 41.88 C
ATOM 7 C4' U B 370 90.657 103.415 24.395 1.00 44.86 C
ATOM 8 O4' U B 370 91.748 103.388 23.442 1.00 46.52 O
ATOM 9 C3' U B 370 90.276 101.955 24.569 1.00 45.90 C
ATOM 10 O3' U B 370 88.940 101.828 25.046 1.00 47.13 O
ATOM 11 C2' U B 370 90.472 101.393 23.166 1.00 44.78 C
ATOM 12 O2' U B 370 89.385 101.663 22.301 1.00 45.39 O
ATOM 13 C1' U B 370 91.697 102.184 22.693 1.00 43.43 C
ATOM 14 N1 U B 370 92.985 101.490 22.837 1.00 40.47 N
ATOM 15 C2 U B 370 93.200 100.364 22.063 1.00 40.46 C
ATOM 16 O2 U B 370 92.378 99.946 21.257 1.00 39.55 O
ATOM 17 N3 U B 370 94.419 99.753 22.252 1.00 40.28 N
ATOM 18 C4 U B 370 95.432 100.159 23.098 1.00 41.11 C
ATOM 19 O4 U B 370 96.482 99.514 23.142 1.00 39.66 O
ATOM 20 C5 U B 370 95.140 101.342 23.851 1.00 41.78 C
ATOM 21 C6 U B 370 93.955 101.946 23.704 1.00 41.42 C
ATOM 22 P A B 371 88.610 100.774 26.210 1.00 47.61 P
ATOM 23 OP1 A B 371 87.189 100.977 26.576 1.00 47.69 O
ATOM 24 OP2 A B 371 89.663 100.848 27.261 1.00 44.47 O
ATOM 25 O5' A B 371 88.743 99.370 25.482 1.00 46.04 O
TER
Atoms:
OP1: (81.897,105.615,18.717)
OP2: (82.949,104.102,16.917)
C3': (86.950,105.746,19.755)
C1': (87.519,103.527,20.294)
C5': (84.462,105.387,20.201)
O4': (86.151,103.733,20.604)
C8: (86.707,102.742,18.005)
O2': (88.706,105.291,21.391)
C6: (89.233,100.622,16.808)
C5: (88.311,101.478,17.421)
C4: (88.627,101.937,18.685)
P: (82.836,104.519,18.345)
C4': (85.874,105.155,20.643)
C2': (88.159,104.911,20.148)
C2: (90.520,100.824,18.718)
N1: (90.351,100.305,17.497)
N3: (89.727,101.645,19.397)
N6: (89.067,100.112,15.587)
N7: (87.091,101.991,17.002)
N9: (87.598,102.766,19.050)
O5': (84.285,104.908,18.868)
O3': (87.131,107.126,20.020)
OP2: (82.949,104.102,16.917)
C3': (86.950,105.746,19.755)
C1': (87.519,103.527,20.294)
C5': (84.462,105.387,20.201)
O4': (86.151,103.733,20.604)
C8: (86.707,102.742,18.005)
O2': (88.706,105.291,21.391)
C6: (89.233,100.622,16.808)
C5: (88.311,101.478,17.421)
C4: (88.627,101.937,18.685)
P: (82.836,104.519,18.345)
C4': (85.874,105.155,20.643)
C2': (88.159,104.911,20.148)
C2: (90.520,100.824,18.718)
N1: (90.351,100.305,17.497)
N3: (89.727,101.645,19.397)
N6: (89.067,100.112,15.587)
N7: (87.091,101.991,17.002)
N9: (87.598,102.766,19.050)
O5': (84.285,104.908,18.868)
O3': (87.131,107.126,20.020)
C4: (95.432,100.159,23.098)
N3: (94.419,99.753,22.252)
OP1: (92.911,105.138,27.755)
OP2: (94.046,102.835,27.728)
C2: (93.200,100.364,22.063)
C1': (91.697,102.184,22.693)
C3': (90.276,101.955,24.569)
O5': (92.044,103.297,26.360)
O4': (91.748,103.388,23.442)
C5': (91.105,104.115,25.652)
P: (93.348,103.934,27.004)
C4': (90.657,103.415,24.395)
C2': (90.472,101.393,23.166)
O2': (89.385,101.663,22.301)
N1: (92.985,101.490,22.837)
O4: (96.482,99.514,23.142)
O2: (92.378,99.946,21.257)
C6: (93.955,101.946,23.704)
C5: (95.140,101.342,23.851)
O3': (88.940,101.828,25.046)
N3: (94.419,99.753,22.252)
OP1: (92.911,105.138,27.755)
OP2: (94.046,102.835,27.728)
C2: (93.200,100.364,22.063)
C1': (91.697,102.184,22.693)
C3': (90.276,101.955,24.569)
O5': (92.044,103.297,26.360)
O4': (91.748,103.388,23.442)
C5': (91.105,104.115,25.652)
P: (93.348,103.934,27.004)
C4': (90.657,103.415,24.395)
C2': (90.472,101.393,23.166)
O2': (89.385,101.663,22.301)
N1: (92.985,101.490,22.837)
O4: (96.482,99.514,23.142)
O2: (92.378,99.946,21.257)
C6: (93.955,101.946,23.704)
C5: (95.140,101.342,23.851)
O3': (88.940,101.828,25.046)
Image (generated by PyMOL):