ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:045:046

Extra

PDB:
ATOM 1 O3' G A 44 60.453 164.522 39.250 1.00 48.94 O
ATOM 2 P U A 45 59.100 165.280 39.646 1.00 51.50 P
ATOM 3 OP1 U A 45 59.352 166.739 39.546 1.00 51.97 O
ATOM 4 OP2 U A 45 58.586 164.710 40.919 1.00 52.39 O
ATOM 5 O5' U A 45 58.087 164.869 38.493 1.00 51.77 O
ATOM 6 C5' U A 45 58.426 165.038 37.114 1.00 52.04 C
ATOM 7 C4' U A 45 57.496 164.214 36.264 1.00 54.12 C
ATOM 8 O4' U A 45 57.799 162.803 36.423 1.00 54.50 O
ATOM 9 C3' U A 45 56.029 164.337 36.645 1.00 53.28 C
ATOM 10 O3' U A 45 55.454 165.484 36.036 1.00 54.37 O
ATOM 11 C2' U A 45 55.446 163.038 36.108 1.00 54.75 C
ATOM 12 O2' U A 45 55.223 163.085 34.717 1.00 56.74 O
ATOM 13 C1' U A 45 56.592 162.056 36.373 1.00 55.56 C
ATOM 14 N1 U A 45 56.456 161.274 37.616 1.00 55.25 N
ATOM 15 C2 U A 45 55.737 160.093 37.554 1.00 54.14 C
ATOM 16 O2 U A 45 55.216 159.688 36.536 1.00 53.76 O
ATOM 17 N3 U A 45 55.652 159.402 38.733 1.00 55.37 N
ATOM 18 C4 U A 45 56.196 159.756 39.944 1.00 55.45 C
ATOM 19 O4 U A 45 56.055 159.007 40.909 1.00 56.59 O
ATOM 20 C5 U A 45 56.919 160.990 39.935 1.00 56.02 C
ATOM 21 C6 U A 45 57.023 161.689 38.801 1.00 55.39 C
ATOM 22 P G A 46 54.512 166.465 36.895 1.00 55.53 P
ATOM 23 OP1 G A 46 54.267 167.663 36.055 1.00 55.66 O
ATOM 24 OP2 G A 46 55.079 166.631 38.253 1.00 56.47 O
ATOM 25 O5' G A 46 53.145 165.663 37.008 1.00 54.17 O
TER

ATOM 1 O3' U B 45 55.454 165.484 36.036 1.00 54.37 O
ATOM 2 P G B 46 54.512 166.465 36.895 1.00 55.53 P
ATOM 3 OP1 G B 46 54.267 167.663 36.055 1.00 55.66 O
ATOM 4 OP2 G B 46 55.079 166.631 38.253 1.00 56.47 O
ATOM 5 O5' G B 46 53.145 165.663 37.008 1.00 54.17 O
ATOM 6 C5' G B 46 52.467 165.235 35.825 1.00 52.30 C
ATOM 7 C4' G B 46 50.982 165.272 36.035 1.00 52.99 C
ATOM 8 O4' G B 46 50.596 164.166 36.888 1.00 54.29 O
ATOM 9 C3' G B 46 50.421 166.531 36.689 1.00 53.80 C
ATOM 10 O3' G B 46 49.148 166.801 36.114 1.00 54.92 O
ATOM 11 C2' G B 46 50.249 166.099 38.144 1.00 53.56 C
ATOM 12 O2' G B 46 49.239 166.820 38.818 1.00 52.43 O
ATOM 13 C1' G B 46 49.814 164.651 37.955 1.00 55.06 C
ATOM 14 N9 G B 46 49.951 163.735 39.084 1.00 57.56 N
ATOM 15 C8 G B 46 50.636 163.923 40.265 1.00 58.27 C
ATOM 16 N7 G B 46 50.554 162.898 41.071 1.00 57.53 N
ATOM 17 C5 G B 46 49.773 161.980 40.381 1.00 58.76 C
ATOM 18 C6 G B 46 49.341 160.684 40.745 1.00 58.86 C
ATOM 19 O6 G B 46 49.568 160.062 41.784 1.00 60.04 O
ATOM 20 N1 G B 46 48.563 160.104 39.747 1.00 60.47 N
ATOM 21 C2 G B 46 48.241 160.694 38.551 1.00 59.55 C
ATOM 22 N2 G B 46 47.481 159.974 37.719 1.00 59.89 N
ATOM 23 N3 G B 46 48.636 161.900 38.199 1.00 58.93 N
ATOM 24 C4 G B 46 49.393 162.483 39.155 1.00 58.81 C
ATOM 25 P C B 47 48.895 168.198 35.365 1.00 55.25 P
ATOM 26 OP1 C B 47 47.578 168.133 34.680 1.00 57.22 O
ATOM 27 OP2 C B 47 50.126 168.488 34.577 1.00 54.53 O
ATOM 28 O5' C B 47 48.758 169.248 36.551 1.00 54.54 O
TER

Atoms:
C4: (56.196,159.756,39.944)
N3: (55.652,159.402,38.733)
OP1: (59.352,166.739,39.546)
OP2: (58.586,164.710,40.919)
C2: (55.737,160.093,37.554)
C1': (56.592,162.056,36.373)
C3': (56.029,164.337,36.645)
O5': (58.087,164.869,38.493)
O4': (57.799,162.803,36.423)
C5': (58.426,165.038,37.114)
P: (59.100,165.280,39.646)
C4': (57.496,164.214,36.264)
C2': (55.446,163.038,36.108)
O2': (55.223,163.085,34.717)
N1: (56.456,161.274,37.616)
O4: (56.055,159.007,40.909)
O2: (55.216,159.688,36.536)
C6: (57.023,161.689,38.801)
C5: (56.919,160.990,39.935)
O3': (55.454,165.484,36.036)
OP1: (54.267,167.663,36.055)
OP2: (55.079,166.631,38.253)
C3': (50.421,166.531,36.689)
C1': (49.814,164.651,37.955)
C5': (52.467,165.235,35.825)
O6: (49.568,160.062,41.784)
O4': (50.596,164.166,36.888)
C8: (50.636,163.923,40.265)
C2: (48.241,160.694,38.551)
C6: (49.341,160.684,40.745)
C5: (49.773,161.980,40.381)
C4: (49.393,162.483,39.155)
P: (54.512,166.465,36.895)
C4': (50.982,165.272,36.035)
C2': (50.249,166.099,38.144)
O2': (49.239,166.820,38.818)
N1: (48.563,160.104,39.747)
N2: (47.481,159.974,37.719)
N3: (48.636,161.900,38.199)
N7: (50.554,162.898,41.071)
N9: (49.951,163.735,39.084)
O5': (53.145,165.663,37.008)
O3': (49.148,166.801,36.114)
Image (generated by PyMOL):
PyMOL image
show in jmol