Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A459:A460
Extra
PDB:
ATOM 1 O3' C A 458 -9.317 5.628 104.566 1.00 58.11 O
ATOM 2 P U A 459 -10.697 6.239 104.020 1.00 80.61 P
ATOM 3 OP1 U A 459 -11.760 5.867 104.998 1.00 57.49 O
ATOM 4 OP2 U A 459 -10.849 5.865 102.582 1.00 56.00 O
ATOM 5 O5' U A 459 -10.463 7.816 104.101 1.00 34.38 O
ATOM 6 C5' U A 459 -10.194 8.462 105.368 1.00 30.21 C
ATOM 7 C4' U A 459 -9.956 9.946 105.172 1.00 26.96 C
ATOM 8 O4' U A 459 -8.685 10.181 104.516 1.00 26.15 O
ATOM 9 C3' U A 459 -10.980 10.691 104.333 1.00 24.59 C
ATOM 10 O3' U A 459 -12.068 11.083 105.158 1.00 21.61 O
ATOM 11 C2' U A 459 -10.192 11.899 103.846 1.00 24.70 C
ATOM 12 O2' U A 459 -10.129 12.887 104.843 1.00 25.08 O
ATOM 13 C1' U A 459 -8.784 11.327 103.699 1.00 25.56 C
ATOM 14 N1 U A 459 -8.427 10.951 102.327 1.00 56.30 N
ATOM 15 C2 U A 459 -7.603 11.804 101.630 1.00 57.99 C
ATOM 16 O2 U A 459 -7.170 12.832 102.106 1.00 59.33 O
ATOM 17 N3 U A 459 -7.299 11.407 100.354 1.00 58.44 N
ATOM 18 C4 U A 459 -7.721 10.264 99.722 1.00 57.66 C
ATOM 19 O4 U A 459 -7.379 10.053 98.559 1.00 57.91 O
ATOM 20 C5 U A 459 -8.569 9.426 100.513 1.00 57.27 C
ATOM 21 C6 U A 459 -8.889 9.793 101.757 1.00 56.62 C
ATOM 22 P G A 460 -13.531 11.255 104.522 1.00 37.87 P
ATOM 23 OP1 G A 460 -14.499 11.304 105.655 1.00 29.21 O
ATOM 24 OP2 G A 460 -13.699 10.231 103.465 1.00 30.27 O
ATOM 25 O5' G A 460 -13.483 12.692 103.821 1.00 20.90 O
TER
ATOM 1 O3' U B 459 -12.068 11.083 105.158 1.00 21.61 O
ATOM 2 P G B 460 -13.531 11.255 104.522 1.00 37.87 P
ATOM 3 OP1 G B 460 -14.499 11.304 105.655 1.00 29.21 O
ATOM 4 OP2 G B 460 -13.699 10.231 103.465 1.00 30.27 O
ATOM 5 O5' G B 460 -13.483 12.692 103.821 1.00 20.90 O
ATOM 6 C5' G B 460 -13.398 13.907 104.615 1.00 18.10 C
ATOM 7 C4' G B 460 -14.417 14.929 104.149 1.00 16.02 C
ATOM 8 O4' G B 460 -14.024 15.456 102.858 1.00 16.12 O
ATOM 9 C3' G B 460 -15.843 14.420 103.997 1.00 15.22 C
ATOM 10 O3' G B 460 -16.759 15.435 104.355 1.00 14.92 O
ATOM 11 C2' G B 460 -15.974 14.195 102.502 1.00 15.75 C
ATOM 12 O2' G B 460 -17.305 14.368 102.091 1.00 15.60 O
ATOM 13 C1' G B 460 -15.087 15.304 101.939 1.00 16.03 C
ATOM 14 N9 G B 460 -14.504 15.015 100.632 1.00 23.03 N
ATOM 15 C8 G B 460 -14.643 13.873 99.884 1.00 23.24 C
ATOM 16 N7 G B 460 -13.935 13.891 98.789 1.00 23.60 N
ATOM 17 C5 G B 460 -13.304 15.124 98.808 1.00 23.82 C
ATOM 18 C6 G B 460 -12.389 15.693 97.896 1.00 24.18 C
ATOM 19 O6 G B 460 -11.921 15.195 96.869 1.00 26.03 O
ATOM 20 N1 G B 460 -12.004 16.972 98.284 1.00 23.09 N
ATOM 21 C2 G B 460 -12.435 17.618 99.419 1.00 22.49 C
ATOM 22 N2 G B 460 -11.957 18.865 99.616 1.00 21.10 N
ATOM 23 N3 G B 460 -13.273 17.082 100.293 1.00 23.99 N
ATOM 24 C4 G B 460 -13.664 15.841 99.924 1.00 24.05 C
ATOM 25 P A B 461 -17.593 15.307 105.720 1.00 62.73 P
ATOM 26 OP1 A B 461 -16.610 14.839 106.737 1.00 13.46 O
ATOM 27 OP2 A B 461 -18.853 14.548 105.494 1.00 13.09 O
ATOM 28 O5' A B 461 -18.007 16.812 106.025 1.00 39.41 O
TER
ATOM 2 P U A 459 -10.697 6.239 104.020 1.00 80.61 P
ATOM 3 OP1 U A 459 -11.760 5.867 104.998 1.00 57.49 O
ATOM 4 OP2 U A 459 -10.849 5.865 102.582 1.00 56.00 O
ATOM 5 O5' U A 459 -10.463 7.816 104.101 1.00 34.38 O
ATOM 6 C5' U A 459 -10.194 8.462 105.368 1.00 30.21 C
ATOM 7 C4' U A 459 -9.956 9.946 105.172 1.00 26.96 C
ATOM 8 O4' U A 459 -8.685 10.181 104.516 1.00 26.15 O
ATOM 9 C3' U A 459 -10.980 10.691 104.333 1.00 24.59 C
ATOM 10 O3' U A 459 -12.068 11.083 105.158 1.00 21.61 O
ATOM 11 C2' U A 459 -10.192 11.899 103.846 1.00 24.70 C
ATOM 12 O2' U A 459 -10.129 12.887 104.843 1.00 25.08 O
ATOM 13 C1' U A 459 -8.784 11.327 103.699 1.00 25.56 C
ATOM 14 N1 U A 459 -8.427 10.951 102.327 1.00 56.30 N
ATOM 15 C2 U A 459 -7.603 11.804 101.630 1.00 57.99 C
ATOM 16 O2 U A 459 -7.170 12.832 102.106 1.00 59.33 O
ATOM 17 N3 U A 459 -7.299 11.407 100.354 1.00 58.44 N
ATOM 18 C4 U A 459 -7.721 10.264 99.722 1.00 57.66 C
ATOM 19 O4 U A 459 -7.379 10.053 98.559 1.00 57.91 O
ATOM 20 C5 U A 459 -8.569 9.426 100.513 1.00 57.27 C
ATOM 21 C6 U A 459 -8.889 9.793 101.757 1.00 56.62 C
ATOM 22 P G A 460 -13.531 11.255 104.522 1.00 37.87 P
ATOM 23 OP1 G A 460 -14.499 11.304 105.655 1.00 29.21 O
ATOM 24 OP2 G A 460 -13.699 10.231 103.465 1.00 30.27 O
ATOM 25 O5' G A 460 -13.483 12.692 103.821 1.00 20.90 O
TER
ATOM 1 O3' U B 459 -12.068 11.083 105.158 1.00 21.61 O
ATOM 2 P G B 460 -13.531 11.255 104.522 1.00 37.87 P
ATOM 3 OP1 G B 460 -14.499 11.304 105.655 1.00 29.21 O
ATOM 4 OP2 G B 460 -13.699 10.231 103.465 1.00 30.27 O
ATOM 5 O5' G B 460 -13.483 12.692 103.821 1.00 20.90 O
ATOM 6 C5' G B 460 -13.398 13.907 104.615 1.00 18.10 C
ATOM 7 C4' G B 460 -14.417 14.929 104.149 1.00 16.02 C
ATOM 8 O4' G B 460 -14.024 15.456 102.858 1.00 16.12 O
ATOM 9 C3' G B 460 -15.843 14.420 103.997 1.00 15.22 C
ATOM 10 O3' G B 460 -16.759 15.435 104.355 1.00 14.92 O
ATOM 11 C2' G B 460 -15.974 14.195 102.502 1.00 15.75 C
ATOM 12 O2' G B 460 -17.305 14.368 102.091 1.00 15.60 O
ATOM 13 C1' G B 460 -15.087 15.304 101.939 1.00 16.03 C
ATOM 14 N9 G B 460 -14.504 15.015 100.632 1.00 23.03 N
ATOM 15 C8 G B 460 -14.643 13.873 99.884 1.00 23.24 C
ATOM 16 N7 G B 460 -13.935 13.891 98.789 1.00 23.60 N
ATOM 17 C5 G B 460 -13.304 15.124 98.808 1.00 23.82 C
ATOM 18 C6 G B 460 -12.389 15.693 97.896 1.00 24.18 C
ATOM 19 O6 G B 460 -11.921 15.195 96.869 1.00 26.03 O
ATOM 20 N1 G B 460 -12.004 16.972 98.284 1.00 23.09 N
ATOM 21 C2 G B 460 -12.435 17.618 99.419 1.00 22.49 C
ATOM 22 N2 G B 460 -11.957 18.865 99.616 1.00 21.10 N
ATOM 23 N3 G B 460 -13.273 17.082 100.293 1.00 23.99 N
ATOM 24 C4 G B 460 -13.664 15.841 99.924 1.00 24.05 C
ATOM 25 P A B 461 -17.593 15.307 105.720 1.00 62.73 P
ATOM 26 OP1 A B 461 -16.610 14.839 106.737 1.00 13.46 O
ATOM 27 OP2 A B 461 -18.853 14.548 105.494 1.00 13.09 O
ATOM 28 O5' A B 461 -18.007 16.812 106.025 1.00 39.41 O
TER
Atoms:
C4: (-7.721,10.264,99.722)
N3: (-7.299,11.407,100.354)
OP1: (-11.760,5.867,104.998)
OP2: (-10.849,5.865,102.582)
C2: (-7.603,11.804,101.630)
C1': (-8.784,11.327,103.699)
C3': (-10.980,10.691,104.333)
O5': (-10.463,7.816,104.101)
O4': (-8.685,10.181,104.516)
C5': (-10.194,8.462,105.368)
P: (-10.697,6.239,104.020)
C4': (-9.956,9.946,105.172)
C2': (-10.192,11.899,103.846)
O2': (-10.129,12.887,104.843)
N1: (-8.427,10.951,102.327)
O4: (-7.379,10.053,98.559)
O2: (-7.170,12.832,102.106)
C6: (-8.889,9.793,101.757)
C5: (-8.569,9.426,100.513)
O3': (-12.068,11.083,105.158)
N3: (-7.299,11.407,100.354)
OP1: (-11.760,5.867,104.998)
OP2: (-10.849,5.865,102.582)
C2: (-7.603,11.804,101.630)
C1': (-8.784,11.327,103.699)
C3': (-10.980,10.691,104.333)
O5': (-10.463,7.816,104.101)
O4': (-8.685,10.181,104.516)
C5': (-10.194,8.462,105.368)
P: (-10.697,6.239,104.020)
C4': (-9.956,9.946,105.172)
C2': (-10.192,11.899,103.846)
O2': (-10.129,12.887,104.843)
N1: (-8.427,10.951,102.327)
O4: (-7.379,10.053,98.559)
O2: (-7.170,12.832,102.106)
C6: (-8.889,9.793,101.757)
C5: (-8.569,9.426,100.513)
O3': (-12.068,11.083,105.158)
OP1: (-14.499,11.304,105.655)
OP2: (-13.699,10.231,103.465)
C3': (-15.843,14.420,103.997)
C1': (-15.087,15.304,101.939)
C5': (-13.398,13.907,104.615)
O6: (-11.921,15.195,96.869)
O4': (-14.024,15.456,102.858)
C8: (-14.643,13.873,99.884)
C2: (-12.435,17.618,99.419)
C6: (-12.389,15.693,97.896)
C5: (-13.304,15.124,98.808)
C4: (-13.664,15.841,99.924)
P: (-13.531,11.255,104.522)
C4': (-14.417,14.929,104.149)
C2': (-15.974,14.195,102.502)
O2': (-17.305,14.368,102.091)
N1: (-12.004,16.972,98.284)
N2: (-11.957,18.865,99.616)
N3: (-13.273,17.082,100.293)
N7: (-13.935,13.891,98.789)
N9: (-14.504,15.015,100.632)
O5': (-13.483,12.692,103.821)
O3': (-16.759,15.435,104.355)
OP2: (-13.699,10.231,103.465)
C3': (-15.843,14.420,103.997)
C1': (-15.087,15.304,101.939)
C5': (-13.398,13.907,104.615)
O6: (-11.921,15.195,96.869)
O4': (-14.024,15.456,102.858)
C8: (-14.643,13.873,99.884)
C2: (-12.435,17.618,99.419)
C6: (-12.389,15.693,97.896)
C5: (-13.304,15.124,98.808)
C4: (-13.664,15.841,99.924)
P: (-13.531,11.255,104.522)
C4': (-14.417,14.929,104.149)
C2': (-15.974,14.195,102.502)
O2': (-17.305,14.368,102.091)
N1: (-12.004,16.972,98.284)
N2: (-11.957,18.865,99.616)
N3: (-13.273,17.082,100.293)
N7: (-13.935,13.891,98.789)
N9: (-14.504,15.015,100.632)
O5': (-13.483,12.692,103.821)
O3': (-16.759,15.435,104.355)
Image (generated by PyMOL):