Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:A1827:A1828
Extra
PDB:
ATOM 1 O3' G A1826 -60.056 108.466 115.502 1.00 39.68 O
ATOM 2 P U A1827 -59.490 106.966 115.586 1.00 31.82 P
ATOM 3 OP1 U A1827 -60.657 106.048 115.629 1.00 56.56 O
ATOM 4 OP2 U A1827 -58.479 106.927 116.675 1.00 56.67 O
ATOM 5 O5' U A1827 -58.730 106.769 114.199 1.00 46.97 O
ATOM 6 C5' U A1827 -59.385 107.090 112.960 1.00 46.97 C
ATOM 7 C4' U A1827 -58.402 107.085 111.816 1.00 46.97 C
ATOM 8 O4' U A1827 -57.395 108.102 112.008 1.00 46.97 O
ATOM 9 C3' U A1827 -57.611 105.807 111.617 1.00 46.97 C
ATOM 10 O3' U A1827 -58.366 104.895 110.848 1.00 46.97 O
ATOM 11 C2' U A1827 -56.383 106.274 110.846 1.00 46.97 C
ATOM 12 O2' U A1827 -56.597 106.331 109.447 1.00 46.97 O
ATOM 13 C1' U A1827 -56.189 107.689 111.389 1.00 46.97 C
ATOM 14 N1 U A1827 -55.081 107.811 112.347 1.00 48.38 N
ATOM 15 C2 U A1827 -53.817 108.062 111.834 1.00 48.45 C
ATOM 16 O2 U A1827 -53.589 108.178 110.635 1.00 48.46 O
ATOM 17 N3 U A1827 -52.827 108.168 112.773 1.00 48.52 N
ATOM 18 C4 U A1827 -52.966 108.046 114.135 1.00 48.46 C
ATOM 19 O4 U A1827 -51.971 108.125 114.845 1.00 48.38 O
ATOM 20 C5 U A1827 -54.296 107.789 114.585 1.00 48.46 C
ATOM 21 C6 U A1827 -55.283 107.682 113.700 1.00 48.41 C
ATOM 22 P A A1828 -58.352 103.343 111.223 1.00 61.00 P
ATOM 23 OP1 A A1828 -59.759 102.885 111.145 1.00 28.67 O
ATOM 24 OP2 A A1828 -57.576 103.140 112.465 1.00 28.95 O
ATOM 25 O5' A A1828 -57.548 102.675 110.030 1.00 21.83 O
TER
ATOM 1 O3' U B1827 -58.366 104.895 110.848 1.00 46.97 O
ATOM 2 P A B1828 -58.352 103.343 111.223 1.00 61.00 P
ATOM 3 OP1 A B1828 -59.759 102.885 111.145 1.00 28.67 O
ATOM 4 OP2 A B1828 -57.576 103.140 112.465 1.00 28.95 O
ATOM 5 O5' A B1828 -57.548 102.675 110.030 1.00 21.83 O
ATOM 6 C5' A B1828 -56.128 102.841 109.898 1.00 21.83 C
ATOM 7 C4' A B1828 -55.646 102.094 108.679 1.00 21.83 C
ATOM 8 O4' A B1828 -54.268 102.437 108.397 1.00 21.83 O
ATOM 9 C3' A B1828 -55.740 100.578 108.771 1.00 21.83 C
ATOM 10 O3' A B1828 -56.415 100.013 107.657 1.00 21.83 O
ATOM 11 C2' A B1828 -54.298 100.104 108.955 1.00 21.83 C
ATOM 12 O2' A B1828 -53.979 98.939 108.213 1.00 21.83 O
ATOM 13 C1' A B1828 -53.453 101.282 108.463 1.00 21.83 C
ATOM 14 N9 A B1828 -52.348 101.556 109.396 1.00 13.01 N
ATOM 15 C8 A B1828 -52.335 101.318 110.750 1.00 12.91 C
ATOM 16 N7 A B1828 -51.212 101.654 111.334 1.00 12.93 N
ATOM 17 C5 A B1828 -50.431 102.150 110.299 1.00 12.98 C
ATOM 18 C6 A B1828 -49.137 102.685 110.272 1.00 13.02 C
ATOM 19 N6 A B1828 -48.368 102.799 111.349 1.00 12.97 N
ATOM 20 N1 A B1828 -48.654 103.106 109.092 1.00 13.04 N
ATOM 21 C2 A B1828 -49.421 102.995 108.022 1.00 13.12 C
ATOM 22 N3 A B1828 -50.656 102.508 107.912 1.00 13.15 N
ATOM 23 C4 A B1828 -51.114 102.097 109.103 1.00 13.03 C
ATOM 24 P A B1829 -57.846 99.293 107.890 1.00 29.87 P
ATOM 25 OP1 A B1829 -58.488 99.180 106.559 1.00 92.73 O
ATOM 26 OP2 A B1829 -58.573 99.977 108.996 1.00 92.81 O
ATOM 27 O5' A B1829 -57.450 97.836 108.398 1.00 28.89 O
TER
ATOM 2 P U A1827 -59.490 106.966 115.586 1.00 31.82 P
ATOM 3 OP1 U A1827 -60.657 106.048 115.629 1.00 56.56 O
ATOM 4 OP2 U A1827 -58.479 106.927 116.675 1.00 56.67 O
ATOM 5 O5' U A1827 -58.730 106.769 114.199 1.00 46.97 O
ATOM 6 C5' U A1827 -59.385 107.090 112.960 1.00 46.97 C
ATOM 7 C4' U A1827 -58.402 107.085 111.816 1.00 46.97 C
ATOM 8 O4' U A1827 -57.395 108.102 112.008 1.00 46.97 O
ATOM 9 C3' U A1827 -57.611 105.807 111.617 1.00 46.97 C
ATOM 10 O3' U A1827 -58.366 104.895 110.848 1.00 46.97 O
ATOM 11 C2' U A1827 -56.383 106.274 110.846 1.00 46.97 C
ATOM 12 O2' U A1827 -56.597 106.331 109.447 1.00 46.97 O
ATOM 13 C1' U A1827 -56.189 107.689 111.389 1.00 46.97 C
ATOM 14 N1 U A1827 -55.081 107.811 112.347 1.00 48.38 N
ATOM 15 C2 U A1827 -53.817 108.062 111.834 1.00 48.45 C
ATOM 16 O2 U A1827 -53.589 108.178 110.635 1.00 48.46 O
ATOM 17 N3 U A1827 -52.827 108.168 112.773 1.00 48.52 N
ATOM 18 C4 U A1827 -52.966 108.046 114.135 1.00 48.46 C
ATOM 19 O4 U A1827 -51.971 108.125 114.845 1.00 48.38 O
ATOM 20 C5 U A1827 -54.296 107.789 114.585 1.00 48.46 C
ATOM 21 C6 U A1827 -55.283 107.682 113.700 1.00 48.41 C
ATOM 22 P A A1828 -58.352 103.343 111.223 1.00 61.00 P
ATOM 23 OP1 A A1828 -59.759 102.885 111.145 1.00 28.67 O
ATOM 24 OP2 A A1828 -57.576 103.140 112.465 1.00 28.95 O
ATOM 25 O5' A A1828 -57.548 102.675 110.030 1.00 21.83 O
TER
ATOM 1 O3' U B1827 -58.366 104.895 110.848 1.00 46.97 O
ATOM 2 P A B1828 -58.352 103.343 111.223 1.00 61.00 P
ATOM 3 OP1 A B1828 -59.759 102.885 111.145 1.00 28.67 O
ATOM 4 OP2 A B1828 -57.576 103.140 112.465 1.00 28.95 O
ATOM 5 O5' A B1828 -57.548 102.675 110.030 1.00 21.83 O
ATOM 6 C5' A B1828 -56.128 102.841 109.898 1.00 21.83 C
ATOM 7 C4' A B1828 -55.646 102.094 108.679 1.00 21.83 C
ATOM 8 O4' A B1828 -54.268 102.437 108.397 1.00 21.83 O
ATOM 9 C3' A B1828 -55.740 100.578 108.771 1.00 21.83 C
ATOM 10 O3' A B1828 -56.415 100.013 107.657 1.00 21.83 O
ATOM 11 C2' A B1828 -54.298 100.104 108.955 1.00 21.83 C
ATOM 12 O2' A B1828 -53.979 98.939 108.213 1.00 21.83 O
ATOM 13 C1' A B1828 -53.453 101.282 108.463 1.00 21.83 C
ATOM 14 N9 A B1828 -52.348 101.556 109.396 1.00 13.01 N
ATOM 15 C8 A B1828 -52.335 101.318 110.750 1.00 12.91 C
ATOM 16 N7 A B1828 -51.212 101.654 111.334 1.00 12.93 N
ATOM 17 C5 A B1828 -50.431 102.150 110.299 1.00 12.98 C
ATOM 18 C6 A B1828 -49.137 102.685 110.272 1.00 13.02 C
ATOM 19 N6 A B1828 -48.368 102.799 111.349 1.00 12.97 N
ATOM 20 N1 A B1828 -48.654 103.106 109.092 1.00 13.04 N
ATOM 21 C2 A B1828 -49.421 102.995 108.022 1.00 13.12 C
ATOM 22 N3 A B1828 -50.656 102.508 107.912 1.00 13.15 N
ATOM 23 C4 A B1828 -51.114 102.097 109.103 1.00 13.03 C
ATOM 24 P A B1829 -57.846 99.293 107.890 1.00 29.87 P
ATOM 25 OP1 A B1829 -58.488 99.180 106.559 1.00 92.73 O
ATOM 26 OP2 A B1829 -58.573 99.977 108.996 1.00 92.81 O
ATOM 27 O5' A B1829 -57.450 97.836 108.398 1.00 28.89 O
TER
Atoms:
C4: (-52.966,108.046,114.135)
N3: (-52.827,108.168,112.773)
OP1: (-60.657,106.048,115.629)
OP2: (-58.479,106.927,116.675)
C2: (-53.817,108.062,111.834)
C1': (-56.189,107.689,111.389)
C3': (-57.611,105.807,111.617)
O5': (-58.730,106.769,114.199)
O4': (-57.395,108.102,112.008)
C5': (-59.385,107.090,112.960)
P: (-59.490,106.966,115.586)
C4': (-58.402,107.085,111.816)
C2': (-56.383,106.274,110.846)
O2': (-56.597,106.331,109.447)
N1: (-55.081,107.811,112.347)
O4: (-51.971,108.125,114.845)
O2: (-53.589,108.178,110.635)
C6: (-55.283,107.682,113.700)
C5: (-54.296,107.789,114.585)
O3': (-58.366,104.895,110.848)
N3: (-52.827,108.168,112.773)
OP1: (-60.657,106.048,115.629)
OP2: (-58.479,106.927,116.675)
C2: (-53.817,108.062,111.834)
C1': (-56.189,107.689,111.389)
C3': (-57.611,105.807,111.617)
O5': (-58.730,106.769,114.199)
O4': (-57.395,108.102,112.008)
C5': (-59.385,107.090,112.960)
P: (-59.490,106.966,115.586)
C4': (-58.402,107.085,111.816)
C2': (-56.383,106.274,110.846)
O2': (-56.597,106.331,109.447)
N1: (-55.081,107.811,112.347)
O4: (-51.971,108.125,114.845)
O2: (-53.589,108.178,110.635)
C6: (-55.283,107.682,113.700)
C5: (-54.296,107.789,114.585)
O3': (-58.366,104.895,110.848)
OP1: (-59.759,102.885,111.145)
OP2: (-57.576,103.140,112.465)
C3': (-55.740,100.578,108.771)
C1': (-53.453,101.282,108.463)
C5': (-56.128,102.841,109.898)
O4': (-54.268,102.437,108.397)
C8: (-52.335,101.318,110.750)
O2': (-53.979,98.939,108.213)
C6: (-49.137,102.685,110.272)
C5: (-50.431,102.150,110.299)
C4: (-51.114,102.097,109.103)
P: (-58.352,103.343,111.223)
C4': (-55.646,102.094,108.679)
C2': (-54.298,100.104,108.955)
C2: (-49.421,102.995,108.022)
N1: (-48.654,103.106,109.092)
N3: (-50.656,102.508,107.912)
N6: (-48.368,102.799,111.349)
N7: (-51.212,101.654,111.334)
N9: (-52.348,101.556,109.396)
O5': (-57.548,102.675,110.030)
O3': (-56.415,100.013,107.657)
OP2: (-57.576,103.140,112.465)
C3': (-55.740,100.578,108.771)
C1': (-53.453,101.282,108.463)
C5': (-56.128,102.841,109.898)
O4': (-54.268,102.437,108.397)
C8: (-52.335,101.318,110.750)
O2': (-53.979,98.939,108.213)
C6: (-49.137,102.685,110.272)
C5: (-50.431,102.150,110.299)
C4: (-51.114,102.097,109.103)
P: (-58.352,103.343,111.223)
C4': (-55.646,102.094,108.679)
C2': (-54.298,100.104,108.955)
C2: (-49.421,102.995,108.022)
N1: (-48.654,103.106,109.092)
N3: (-50.656,102.508,107.912)
N6: (-48.368,102.799,111.349)
N7: (-51.212,101.654,111.334)
N9: (-52.348,101.556,109.396)
O5': (-57.548,102.675,110.030)
O3': (-56.415,100.013,107.657)
Image (generated by PyMOL):