Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:0288:0287
Extra
PDB:
ATOM 1 O3' U A 287 40.231 132.991 26.226 1.00 69.93 O
ATOM 2 P C A 288 38.773 133.661 26.320 1.00 70.88 P
ATOM 3 OP1 C A 288 38.703 134.394 27.616 1.00 69.07 O
ATOM 4 OP2 C A 288 37.755 132.620 26.000 1.00 69.37 O
ATOM 5 O5' C A 288 38.746 134.716 25.127 1.00 70.12 O
ATOM 6 C5' C A 288 39.592 135.874 25.148 1.00 70.06 C
ATOM 7 C4' C A 288 39.490 136.613 23.839 1.00 69.68 C
ATOM 8 O4' C A 288 39.896 135.729 22.757 1.00 70.04 O
ATOM 9 C3' C A 288 38.096 137.050 23.422 1.00 68.77 C
ATOM 10 O3' C A 288 37.668 138.236 24.077 1.00 69.55 O
ATOM 11 C2' C A 288 38.276 137.251 21.928 1.00 68.73 C
ATOM 12 O2' C A 288 38.975 138.441 21.629 1.00 68.06 O
ATOM 13 C1' C A 288 39.167 136.057 21.583 1.00 69.36 C
ATOM 14 N1 C A 288 38.374 134.887 21.158 1.00 68.89 N
ATOM 15 C2 C A 288 37.975 134.805 19.819 1.00 68.69 C
ATOM 16 O2 C A 288 38.318 135.700 19.038 1.00 68.80 O
ATOM 17 N3 C A 288 37.225 133.759 19.412 1.00 68.69 N
ATOM 18 C4 C A 288 36.869 132.817 20.283 1.00 69.08 C
ATOM 19 N4 C A 288 36.107 131.813 19.838 1.00 68.24 N
ATOM 20 C5 C A 288 37.271 132.864 21.652 1.00 68.99 C
ATOM 21 C6 C A 288 38.017 133.906 22.042 1.00 68.65 C
ATOM 22 P G A 289 36.102 138.447 24.394 1.00 70.44 P
ATOM 23 OP1 G A 289 35.994 139.647 25.267 1.00 70.39 O
ATOM 24 OP2 G A 289 35.532 137.155 24.853 1.00 69.79 O
ATOM 25 O5' G A 289 35.454 138.781 22.973 1.00 69.69 O
TER
ATOM 1 O3' C B 286 41.195 126.857 25.790 1.00 76.03 O
ATOM 2 P U B 287 39.823 127.659 26.069 1.00 75.00 P
ATOM 3 OP1 U B 287 39.590 127.639 27.539 1.00 73.96 O
ATOM 4 OP2 U B 287 38.774 127.132 25.154 1.00 74.32 O
ATOM 5 O5' U B 287 40.154 129.156 25.625 1.00 74.46 O
ATOM 6 C5' U B 287 41.189 129.902 26.295 1.00 73.05 C
ATOM 7 C4' U B 287 41.604 131.106 25.479 1.00 72.15 C
ATOM 8 O4' U B 287 42.072 130.686 24.167 1.00 72.09 O
ATOM 9 C3' U B 287 40.523 132.118 25.148 1.00 70.78 C
ATOM 10 O3' U B 287 40.231 132.991 26.226 1.00 69.93 O
ATOM 11 C2' U B 287 41.146 132.863 23.979 1.00 70.40 C
ATOM 12 O2' U B 287 42.145 133.772 24.392 1.00 69.51 O
ATOM 13 C1' U B 287 41.797 131.710 23.216 1.00 70.20 C
ATOM 14 N1 U B 287 40.902 131.179 22.174 1.00 69.04 N
ATOM 15 C2 U B 287 40.707 131.959 21.041 1.00 68.28 C
ATOM 16 O2 U B 287 41.246 133.041 20.884 1.00 68.10 O
ATOM 17 N3 U B 287 39.857 131.425 20.104 1.00 67.43 N
ATOM 18 C4 U B 287 39.193 130.218 20.180 1.00 68.50 C
ATOM 19 O4 U B 287 38.452 129.876 19.257 1.00 68.57 O
ATOM 20 C5 U B 287 39.449 129.467 21.375 1.00 69.39 C
ATOM 21 C6 U B 287 40.273 129.960 22.308 1.00 68.78 C
ATOM 22 P C B 288 38.773 133.661 26.320 1.00 70.88 P
ATOM 23 OP1 C B 288 38.703 134.394 27.616 1.00 69.07 O
ATOM 24 OP2 C B 288 37.755 132.620 26.000 1.00 69.37 O
ATOM 25 O5' C B 288 38.746 134.716 25.127 1.00 70.12 O
TER
ATOM 2 P C A 288 38.773 133.661 26.320 1.00 70.88 P
ATOM 3 OP1 C A 288 38.703 134.394 27.616 1.00 69.07 O
ATOM 4 OP2 C A 288 37.755 132.620 26.000 1.00 69.37 O
ATOM 5 O5' C A 288 38.746 134.716 25.127 1.00 70.12 O
ATOM 6 C5' C A 288 39.592 135.874 25.148 1.00 70.06 C
ATOM 7 C4' C A 288 39.490 136.613 23.839 1.00 69.68 C
ATOM 8 O4' C A 288 39.896 135.729 22.757 1.00 70.04 O
ATOM 9 C3' C A 288 38.096 137.050 23.422 1.00 68.77 C
ATOM 10 O3' C A 288 37.668 138.236 24.077 1.00 69.55 O
ATOM 11 C2' C A 288 38.276 137.251 21.928 1.00 68.73 C
ATOM 12 O2' C A 288 38.975 138.441 21.629 1.00 68.06 O
ATOM 13 C1' C A 288 39.167 136.057 21.583 1.00 69.36 C
ATOM 14 N1 C A 288 38.374 134.887 21.158 1.00 68.89 N
ATOM 15 C2 C A 288 37.975 134.805 19.819 1.00 68.69 C
ATOM 16 O2 C A 288 38.318 135.700 19.038 1.00 68.80 O
ATOM 17 N3 C A 288 37.225 133.759 19.412 1.00 68.69 N
ATOM 18 C4 C A 288 36.869 132.817 20.283 1.00 69.08 C
ATOM 19 N4 C A 288 36.107 131.813 19.838 1.00 68.24 N
ATOM 20 C5 C A 288 37.271 132.864 21.652 1.00 68.99 C
ATOM 21 C6 C A 288 38.017 133.906 22.042 1.00 68.65 C
ATOM 22 P G A 289 36.102 138.447 24.394 1.00 70.44 P
ATOM 23 OP1 G A 289 35.994 139.647 25.267 1.00 70.39 O
ATOM 24 OP2 G A 289 35.532 137.155 24.853 1.00 69.79 O
ATOM 25 O5' G A 289 35.454 138.781 22.973 1.00 69.69 O
TER
ATOM 1 O3' C B 286 41.195 126.857 25.790 1.00 76.03 O
ATOM 2 P U B 287 39.823 127.659 26.069 1.00 75.00 P
ATOM 3 OP1 U B 287 39.590 127.639 27.539 1.00 73.96 O
ATOM 4 OP2 U B 287 38.774 127.132 25.154 1.00 74.32 O
ATOM 5 O5' U B 287 40.154 129.156 25.625 1.00 74.46 O
ATOM 6 C5' U B 287 41.189 129.902 26.295 1.00 73.05 C
ATOM 7 C4' U B 287 41.604 131.106 25.479 1.00 72.15 C
ATOM 8 O4' U B 287 42.072 130.686 24.167 1.00 72.09 O
ATOM 9 C3' U B 287 40.523 132.118 25.148 1.00 70.78 C
ATOM 10 O3' U B 287 40.231 132.991 26.226 1.00 69.93 O
ATOM 11 C2' U B 287 41.146 132.863 23.979 1.00 70.40 C
ATOM 12 O2' U B 287 42.145 133.772 24.392 1.00 69.51 O
ATOM 13 C1' U B 287 41.797 131.710 23.216 1.00 70.20 C
ATOM 14 N1 U B 287 40.902 131.179 22.174 1.00 69.04 N
ATOM 15 C2 U B 287 40.707 131.959 21.041 1.00 68.28 C
ATOM 16 O2 U B 287 41.246 133.041 20.884 1.00 68.10 O
ATOM 17 N3 U B 287 39.857 131.425 20.104 1.00 67.43 N
ATOM 18 C4 U B 287 39.193 130.218 20.180 1.00 68.50 C
ATOM 19 O4 U B 287 38.452 129.876 19.257 1.00 68.57 O
ATOM 20 C5 U B 287 39.449 129.467 21.375 1.00 69.39 C
ATOM 21 C6 U B 287 40.273 129.960 22.308 1.00 68.78 C
ATOM 22 P C B 288 38.773 133.661 26.320 1.00 70.88 P
ATOM 23 OP1 C B 288 38.703 134.394 27.616 1.00 69.07 O
ATOM 24 OP2 C B 288 37.755 132.620 26.000 1.00 69.37 O
ATOM 25 O5' C B 288 38.746 134.716 25.127 1.00 70.12 O
TER
Atoms:
C2: (37.975,134.805,19.819)
OP1: (38.703,134.394,27.616)
OP2: (37.755,132.620,26.000)
C4: (36.869,132.817,20.283)
O5': (38.746,134.716,25.127)
C3': (38.096,137.050,23.422)
C1': (39.167,136.057,21.583)
O4': (39.896,135.729,22.757)
C5': (39.592,135.874,25.148)
P: (38.773,133.661,26.320)
O2: (38.318,135.700,19.038)
C4': (39.490,136.613,23.839)
C2': (38.276,137.251,21.928)
O2': (38.975,138.441,21.629)
N1: (38.374,134.887,21.158)
N3: (37.225,133.759,19.412)
N4: (36.107,131.813,19.838)
C6: (38.017,133.906,22.042)
C5: (37.271,132.864,21.652)
O3': (37.668,138.236,24.077)
OP1: (38.703,134.394,27.616)
OP2: (37.755,132.620,26.000)
C4: (36.869,132.817,20.283)
O5': (38.746,134.716,25.127)
C3': (38.096,137.050,23.422)
C1': (39.167,136.057,21.583)
O4': (39.896,135.729,22.757)
C5': (39.592,135.874,25.148)
P: (38.773,133.661,26.320)
O2: (38.318,135.700,19.038)
C4': (39.490,136.613,23.839)
C2': (38.276,137.251,21.928)
O2': (38.975,138.441,21.629)
N1: (38.374,134.887,21.158)
N3: (37.225,133.759,19.412)
N4: (36.107,131.813,19.838)
C6: (38.017,133.906,22.042)
C5: (37.271,132.864,21.652)
O3': (37.668,138.236,24.077)
C4: (39.193,130.218,20.180)
N3: (39.857,131.425,20.104)
OP1: (39.590,127.639,27.539)
OP2: (38.774,127.132,25.154)
C2: (40.707,131.959,21.041)
C1': (41.797,131.710,23.216)
C3': (40.523,132.118,25.148)
O5': (40.154,129.156,25.625)
O4': (42.072,130.686,24.167)
C5': (41.189,129.902,26.295)
P: (39.823,127.659,26.069)
C4': (41.604,131.106,25.479)
C2': (41.146,132.863,23.979)
O2': (42.145,133.772,24.392)
N1: (40.902,131.179,22.174)
O4: (38.452,129.876,19.257)
O2: (41.246,133.041,20.884)
C6: (40.273,129.960,22.308)
C5: (39.449,129.467,21.375)
O3': (40.231,132.991,26.226)
N3: (39.857,131.425,20.104)
OP1: (39.590,127.639,27.539)
OP2: (38.774,127.132,25.154)
C2: (40.707,131.959,21.041)
C1': (41.797,131.710,23.216)
C3': (40.523,132.118,25.148)
O5': (40.154,129.156,25.625)
O4': (42.072,130.686,24.167)
C5': (41.189,129.902,26.295)
P: (39.823,127.659,26.069)
C4': (41.604,131.106,25.479)
C2': (41.146,132.863,23.979)
O2': (42.145,133.772,24.392)
N1: (40.902,131.179,22.174)
O4: (38.452,129.876,19.257)
O2: (41.246,133.041,20.884)
C6: (40.273,129.960,22.308)
C5: (39.449,129.467,21.375)
O3': (40.231,132.991,26.226)
Image (generated by PyMOL):