Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2OTJ:0553:01223
Extra
PDB:
ATOM 1 O3' G A 552 -5.868 93.962 96.541 1.00 59.06 O
ATOM 2 P A A 553 -5.339 93.042 97.747 1.00 59.74 P
ATOM 3 OP1 A A 553 -5.901 91.683 97.540 1.00 57.83 O
ATOM 4 OP2 A A 553 -5.552 93.744 99.041 1.00 57.88 O
ATOM 5 O5' A A 553 -3.775 92.929 97.464 1.00 58.99 O
ATOM 6 C5' A A 553 -3.304 92.278 96.263 1.00 58.42 C
ATOM 7 C4' A A 553 -1.806 92.415 96.124 1.00 57.02 C
ATOM 8 O4' A A 553 -1.443 93.770 95.755 1.00 56.41 O
ATOM 9 C3' A A 553 -0.996 92.151 97.375 1.00 56.10 C
ATOM 10 O3' A A 553 -0.851 90.763 97.604 1.00 55.39 O
ATOM 11 C2' A A 553 0.322 92.827 97.034 1.00 55.43 C
ATOM 12 O2' A A 553 1.062 92.035 96.125 1.00 54.91 O
ATOM 13 C1' A A 553 -0.171 94.080 96.303 1.00 55.16 C
ATOM 14 N9 A A 553 -0.320 95.269 97.141 1.00 54.29 N
ATOM 15 C8 A A 553 -1.472 95.740 97.715 1.00 54.10 C
ATOM 16 N7 A A 553 -1.316 96.867 98.367 1.00 54.64 N
ATOM 17 C5 A A 553 0.033 97.153 98.222 1.00 54.31 C
ATOM 18 C6 A A 553 0.824 98.224 98.665 1.00 54.13 C
ATOM 19 N6 A A 553 0.353 99.248 99.372 1.00 54.56 N
ATOM 20 N1 A A 553 2.132 98.210 98.350 1.00 54.17 N
ATOM 21 C2 A A 553 2.605 97.183 97.636 1.00 54.28 C
ATOM 22 N3 A A 553 1.965 96.122 97.158 1.00 53.96 N
ATOM 23 C4 A A 553 0.663 96.167 97.486 1.00 54.22 C
ATOM 24 P A A 554 -0.942 90.199 99.103 1.00 55.97 P
ATOM 25 OP1 A A 554 -1.090 88.721 98.994 1.00 54.51 O
ATOM 26 OP2 A A 554 -1.945 91.001 99.859 1.00 55.44 O
ATOM 27 O5' A A 554 0.478 90.531 99.742 1.00 54.91 O
TER
ATOM 1 O3' C B1222 7.674 88.359 97.323 1.00 45.07 O
ATOM 2 P U B1223 7.238 88.587 95.805 1.00 45.64 P
ATOM 3 OP1 U B1223 6.338 87.471 95.431 1.00 45.05 O
ATOM 4 OP2 U B1223 8.467 88.816 95.020 1.00 45.51 O
ATOM 5 O5' U B1223 6.412 89.947 95.865 1.00 43.85 O
ATOM 6 C5' U B1223 5.094 89.965 96.420 1.00 44.00 C
ATOM 7 C4' U B1223 4.523 91.362 96.419 1.00 44.18 C
ATOM 8 O4' U B1223 5.319 92.220 97.270 1.00 44.71 O
ATOM 9 C3' U B1223 4.510 92.104 95.101 1.00 44.19 C
ATOM 10 O3' U B1223 3.453 91.692 94.264 1.00 45.60 O
ATOM 11 C2' U B1223 4.353 93.544 95.559 1.00 44.50 C
ATOM 12 O2' U B1223 3.045 93.880 95.946 1.00 43.73 O
ATOM 13 C1' U B1223 5.254 93.554 96.790 1.00 45.10 C
ATOM 14 N1 U B1223 6.607 93.992 96.422 1.00 46.05 N
ATOM 15 C2 U B1223 6.852 95.347 96.441 1.00 46.58 C
ATOM 16 O2 U B1223 6.016 96.164 96.790 1.00 46.91 O
ATOM 17 N3 U B1223 8.108 95.713 96.033 1.00 46.70 N
ATOM 18 C4 U B1223 9.117 94.882 95.620 1.00 46.14 C
ATOM 19 O4 U B1223 10.167 95.372 95.217 1.00 46.77 O
ATOM 20 C5 U B1223 8.793 93.489 95.650 1.00 45.91 C
ATOM 21 C6 U B1223 7.582 93.101 96.044 1.00 45.52 C
ATOM 22 P G B1224 3.584 91.884 92.679 1.00 46.88 P
ATOM 23 OP1 G B1224 2.680 90.892 92.034 1.00 46.45 O
ATOM 24 OP2 G B1224 5.031 91.876 92.349 1.00 48.04 O
ATOM 25 O5' G B1224 3.004 93.345 92.429 1.00 45.67 O
TER
ATOM 2 P A A 553 -5.339 93.042 97.747 1.00 59.74 P
ATOM 3 OP1 A A 553 -5.901 91.683 97.540 1.00 57.83 O
ATOM 4 OP2 A A 553 -5.552 93.744 99.041 1.00 57.88 O
ATOM 5 O5' A A 553 -3.775 92.929 97.464 1.00 58.99 O
ATOM 6 C5' A A 553 -3.304 92.278 96.263 1.00 58.42 C
ATOM 7 C4' A A 553 -1.806 92.415 96.124 1.00 57.02 C
ATOM 8 O4' A A 553 -1.443 93.770 95.755 1.00 56.41 O
ATOM 9 C3' A A 553 -0.996 92.151 97.375 1.00 56.10 C
ATOM 10 O3' A A 553 -0.851 90.763 97.604 1.00 55.39 O
ATOM 11 C2' A A 553 0.322 92.827 97.034 1.00 55.43 C
ATOM 12 O2' A A 553 1.062 92.035 96.125 1.00 54.91 O
ATOM 13 C1' A A 553 -0.171 94.080 96.303 1.00 55.16 C
ATOM 14 N9 A A 553 -0.320 95.269 97.141 1.00 54.29 N
ATOM 15 C8 A A 553 -1.472 95.740 97.715 1.00 54.10 C
ATOM 16 N7 A A 553 -1.316 96.867 98.367 1.00 54.64 N
ATOM 17 C5 A A 553 0.033 97.153 98.222 1.00 54.31 C
ATOM 18 C6 A A 553 0.824 98.224 98.665 1.00 54.13 C
ATOM 19 N6 A A 553 0.353 99.248 99.372 1.00 54.56 N
ATOM 20 N1 A A 553 2.132 98.210 98.350 1.00 54.17 N
ATOM 21 C2 A A 553 2.605 97.183 97.636 1.00 54.28 C
ATOM 22 N3 A A 553 1.965 96.122 97.158 1.00 53.96 N
ATOM 23 C4 A A 553 0.663 96.167 97.486 1.00 54.22 C
ATOM 24 P A A 554 -0.942 90.199 99.103 1.00 55.97 P
ATOM 25 OP1 A A 554 -1.090 88.721 98.994 1.00 54.51 O
ATOM 26 OP2 A A 554 -1.945 91.001 99.859 1.00 55.44 O
ATOM 27 O5' A A 554 0.478 90.531 99.742 1.00 54.91 O
TER
ATOM 1 O3' C B1222 7.674 88.359 97.323 1.00 45.07 O
ATOM 2 P U B1223 7.238 88.587 95.805 1.00 45.64 P
ATOM 3 OP1 U B1223 6.338 87.471 95.431 1.00 45.05 O
ATOM 4 OP2 U B1223 8.467 88.816 95.020 1.00 45.51 O
ATOM 5 O5' U B1223 6.412 89.947 95.865 1.00 43.85 O
ATOM 6 C5' U B1223 5.094 89.965 96.420 1.00 44.00 C
ATOM 7 C4' U B1223 4.523 91.362 96.419 1.00 44.18 C
ATOM 8 O4' U B1223 5.319 92.220 97.270 1.00 44.71 O
ATOM 9 C3' U B1223 4.510 92.104 95.101 1.00 44.19 C
ATOM 10 O3' U B1223 3.453 91.692 94.264 1.00 45.60 O
ATOM 11 C2' U B1223 4.353 93.544 95.559 1.00 44.50 C
ATOM 12 O2' U B1223 3.045 93.880 95.946 1.00 43.73 O
ATOM 13 C1' U B1223 5.254 93.554 96.790 1.00 45.10 C
ATOM 14 N1 U B1223 6.607 93.992 96.422 1.00 46.05 N
ATOM 15 C2 U B1223 6.852 95.347 96.441 1.00 46.58 C
ATOM 16 O2 U B1223 6.016 96.164 96.790 1.00 46.91 O
ATOM 17 N3 U B1223 8.108 95.713 96.033 1.00 46.70 N
ATOM 18 C4 U B1223 9.117 94.882 95.620 1.00 46.14 C
ATOM 19 O4 U B1223 10.167 95.372 95.217 1.00 46.77 O
ATOM 20 C5 U B1223 8.793 93.489 95.650 1.00 45.91 C
ATOM 21 C6 U B1223 7.582 93.101 96.044 1.00 45.52 C
ATOM 22 P G B1224 3.584 91.884 92.679 1.00 46.88 P
ATOM 23 OP1 G B1224 2.680 90.892 92.034 1.00 46.45 O
ATOM 24 OP2 G B1224 5.031 91.876 92.349 1.00 48.04 O
ATOM 25 O5' G B1224 3.004 93.345 92.429 1.00 45.67 O
TER
Atoms:
OP1: (-5.901,91.683,97.540)
OP2: (-5.552,93.744,99.041)
C3': (-0.996,92.151,97.375)
C1': (-0.171,94.080,96.303)
C5': (-3.304,92.278,96.263)
O4': (-1.443,93.770,95.755)
C8: (-1.472,95.740,97.715)
O2': (1.062,92.035,96.125)
C6: (0.824,98.224,98.665)
C5: (0.033,97.153,98.222)
C4: (0.663,96.167,97.486)
P: (-5.339,93.042,97.747)
C4': (-1.806,92.415,96.124)
C2': (0.322,92.827,97.034)
C2: (2.605,97.183,97.636)
N1: (2.132,98.210,98.350)
N3: (1.965,96.122,97.158)
N6: (0.353,99.248,99.372)
N7: (-1.316,96.867,98.367)
N9: (-0.320,95.269,97.141)
O5': (-3.775,92.929,97.464)
O3': (-0.851,90.763,97.604)
OP2: (-5.552,93.744,99.041)
C3': (-0.996,92.151,97.375)
C1': (-0.171,94.080,96.303)
C5': (-3.304,92.278,96.263)
O4': (-1.443,93.770,95.755)
C8: (-1.472,95.740,97.715)
O2': (1.062,92.035,96.125)
C6: (0.824,98.224,98.665)
C5: (0.033,97.153,98.222)
C4: (0.663,96.167,97.486)
P: (-5.339,93.042,97.747)
C4': (-1.806,92.415,96.124)
C2': (0.322,92.827,97.034)
C2: (2.605,97.183,97.636)
N1: (2.132,98.210,98.350)
N3: (1.965,96.122,97.158)
N6: (0.353,99.248,99.372)
N7: (-1.316,96.867,98.367)
N9: (-0.320,95.269,97.141)
O5': (-3.775,92.929,97.464)
O3': (-0.851,90.763,97.604)
C4: (9.117,94.882,95.620)
N3: (8.108,95.713,96.033)
OP1: (6.338,87.471,95.431)
OP2: (8.467,88.816,95.020)
C2: (6.852,95.347,96.441)
C1': (5.254,93.554,96.790)
C3': (4.510,92.104,95.101)
O5': (6.412,89.947,95.865)
O4': (5.319,92.220,97.270)
C5': (5.094,89.965,96.420)
P: (7.238,88.587,95.805)
C4': (4.523,91.362,96.419)
C2': (4.353,93.544,95.559)
O2': (3.045,93.880,95.946)
N1: (6.607,93.992,96.422)
O4: (10.167,95.372,95.217)
O2: (6.016,96.164,96.790)
C6: (7.582,93.101,96.044)
C5: (8.793,93.489,95.650)
O3': (3.453,91.692,94.264)
N3: (8.108,95.713,96.033)
OP1: (6.338,87.471,95.431)
OP2: (8.467,88.816,95.020)
C2: (6.852,95.347,96.441)
C1': (5.254,93.554,96.790)
C3': (4.510,92.104,95.101)
O5': (6.412,89.947,95.865)
O4': (5.319,92.220,97.270)
C5': (5.094,89.965,96.420)
P: (7.238,88.587,95.805)
C4': (4.523,91.362,96.419)
C2': (4.353,93.544,95.559)
O2': (3.045,93.880,95.946)
N1: (6.607,93.992,96.422)
O4: (10.167,95.372,95.217)
O2: (6.016,96.164,96.790)
C6: (7.582,93.101,96.044)
C5: (8.793,93.489,95.650)
O3': (3.453,91.692,94.264)
Image (generated by PyMOL):