Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11604:11603
Extra
PDB:
ATOM 1 O3' U A1603 5.110 27.790 117.039 1.00 55.56 O
ATOM 2 P C A1604 5.205 29.361 117.254 1.00 50.04 P
ATOM 3 OP1 C A1604 6.292 29.847 116.376 1.00 49.74 O
ATOM 4 OP2 C A1604 5.294 29.600 118.713 1.00 50.56 O
ATOM 5 O5' C A1604 3.798 29.872 116.734 1.00 50.23 O
ATOM 6 C5' C A1604 3.423 29.786 115.379 1.00 49.85 C
ATOM 7 C4' C A1604 1.939 29.950 115.234 1.00 50.09 C
ATOM 8 O4' C A1604 1.284 28.984 116.083 1.00 50.19 O
ATOM 9 C3' C A1604 1.367 31.288 115.678 1.00 50.69 C
ATOM 10 O3' C A1604 1.427 32.278 114.666 1.00 50.66 O
ATOM 11 C2' C A1604 -0.053 30.928 116.069 1.00 50.94 C
ATOM 12 O2' C A1604 -0.878 30.843 114.926 1.00 50.72 O
ATOM 13 C1' C A1604 0.120 29.528 116.640 1.00 50.70 C
ATOM 14 N1 C A1604 0.265 29.562 118.096 1.00 51.14 N
ATOM 15 C2 C A1604 -0.891 29.631 118.827 1.00 51.58 C
ATOM 16 O2 C A1604 -1.943 29.625 118.172 1.00 51.56 O
ATOM 17 N3 C A1604 -0.831 29.706 120.171 1.00 52.03 N
ATOM 18 C4 C A1604 0.349 29.730 120.771 1.00 52.03 C
ATOM 19 N4 C A1604 0.446 29.808 122.101 1.00 52.48 N
ATOM 20 C5 C A1604 1.537 29.666 120.016 1.00 51.57 C
ATOM 21 C6 C A1604 1.463 29.594 118.695 1.00 51.14 C
ATOM 22 P G A1605 1.509 33.850 115.046 1.00 61.38 P
ATOM 23 OP1 G A1605 1.854 34.574 113.798 1.00 61.17 O
ATOM 24 OP2 G A1605 2.398 33.989 116.205 1.00 61.62 O
ATOM 25 O5' G A1605 0.029 34.189 115.473 1.00 61.86 O
TER
ATOM 1 O3' G B1602 7.276 24.482 121.452 1.00 62.12 O
ATOM 2 P U B1603 7.376 26.071 121.220 1.00 56.17 P
ATOM 3 OP1 U B1603 8.770 26.343 120.772 1.00 55.90 O
ATOM 4 OP2 U B1603 6.877 26.754 122.434 1.00 56.82 O
ATOM 5 O5' U B1603 6.365 26.301 120.018 1.00 55.96 O
ATOM 6 C5' U B1603 6.407 25.491 118.859 1.00 55.37 C
ATOM 7 C4' U B1603 5.125 25.597 118.105 1.00 55.34 C
ATOM 8 O4' U B1603 4.097 24.829 118.786 1.00 55.52 O
ATOM 9 C3' U B1603 4.522 26.991 118.026 1.00 55.75 C
ATOM 10 O3' U B1603 5.110 27.790 117.039 1.00 55.56 O
ATOM 11 C2' U B1603 3.072 26.699 117.752 1.00 55.81 C
ATOM 12 O2' U B1603 2.930 26.291 116.409 1.00 55.31 O
ATOM 13 C1' U B1603 2.847 25.487 118.656 1.00 55.83 C
ATOM 14 N1 U B1603 2.383 25.887 120.007 1.00 56.43 N
ATOM 15 C2 U B1603 1.059 26.207 120.174 1.00 56.78 C
ATOM 16 O2 U B1603 0.301 26.179 119.248 1.00 56.60 O
ATOM 17 N3 U B1603 0.654 26.589 121.429 1.00 57.36 N
ATOM 18 C4 U B1603 1.467 26.667 122.539 1.00 57.62 C
ATOM 19 O4 U B1603 1.022 27.011 123.635 1.00 58.16 O
ATOM 20 C5 U B1603 2.825 26.309 122.276 1.00 57.23 C
ATOM 21 C6 U B1603 3.232 25.958 121.065 1.00 56.67 C
ATOM 22 P C B1604 5.205 29.361 117.254 1.00 50.04 P
ATOM 23 OP1 C B1604 6.292 29.847 116.376 1.00 49.74 O
ATOM 24 OP2 C B1604 5.294 29.600 118.713 1.00 50.56 O
ATOM 25 O5' C B1604 3.798 29.872 116.734 1.00 50.23 O
TER
ATOM 2 P C A1604 5.205 29.361 117.254 1.00 50.04 P
ATOM 3 OP1 C A1604 6.292 29.847 116.376 1.00 49.74 O
ATOM 4 OP2 C A1604 5.294 29.600 118.713 1.00 50.56 O
ATOM 5 O5' C A1604 3.798 29.872 116.734 1.00 50.23 O
ATOM 6 C5' C A1604 3.423 29.786 115.379 1.00 49.85 C
ATOM 7 C4' C A1604 1.939 29.950 115.234 1.00 50.09 C
ATOM 8 O4' C A1604 1.284 28.984 116.083 1.00 50.19 O
ATOM 9 C3' C A1604 1.367 31.288 115.678 1.00 50.69 C
ATOM 10 O3' C A1604 1.427 32.278 114.666 1.00 50.66 O
ATOM 11 C2' C A1604 -0.053 30.928 116.069 1.00 50.94 C
ATOM 12 O2' C A1604 -0.878 30.843 114.926 1.00 50.72 O
ATOM 13 C1' C A1604 0.120 29.528 116.640 1.00 50.70 C
ATOM 14 N1 C A1604 0.265 29.562 118.096 1.00 51.14 N
ATOM 15 C2 C A1604 -0.891 29.631 118.827 1.00 51.58 C
ATOM 16 O2 C A1604 -1.943 29.625 118.172 1.00 51.56 O
ATOM 17 N3 C A1604 -0.831 29.706 120.171 1.00 52.03 N
ATOM 18 C4 C A1604 0.349 29.730 120.771 1.00 52.03 C
ATOM 19 N4 C A1604 0.446 29.808 122.101 1.00 52.48 N
ATOM 20 C5 C A1604 1.537 29.666 120.016 1.00 51.57 C
ATOM 21 C6 C A1604 1.463 29.594 118.695 1.00 51.14 C
ATOM 22 P G A1605 1.509 33.850 115.046 1.00 61.38 P
ATOM 23 OP1 G A1605 1.854 34.574 113.798 1.00 61.17 O
ATOM 24 OP2 G A1605 2.398 33.989 116.205 1.00 61.62 O
ATOM 25 O5' G A1605 0.029 34.189 115.473 1.00 61.86 O
TER
ATOM 1 O3' G B1602 7.276 24.482 121.452 1.00 62.12 O
ATOM 2 P U B1603 7.376 26.071 121.220 1.00 56.17 P
ATOM 3 OP1 U B1603 8.770 26.343 120.772 1.00 55.90 O
ATOM 4 OP2 U B1603 6.877 26.754 122.434 1.00 56.82 O
ATOM 5 O5' U B1603 6.365 26.301 120.018 1.00 55.96 O
ATOM 6 C5' U B1603 6.407 25.491 118.859 1.00 55.37 C
ATOM 7 C4' U B1603 5.125 25.597 118.105 1.00 55.34 C
ATOM 8 O4' U B1603 4.097 24.829 118.786 1.00 55.52 O
ATOM 9 C3' U B1603 4.522 26.991 118.026 1.00 55.75 C
ATOM 10 O3' U B1603 5.110 27.790 117.039 1.00 55.56 O
ATOM 11 C2' U B1603 3.072 26.699 117.752 1.00 55.81 C
ATOM 12 O2' U B1603 2.930 26.291 116.409 1.00 55.31 O
ATOM 13 C1' U B1603 2.847 25.487 118.656 1.00 55.83 C
ATOM 14 N1 U B1603 2.383 25.887 120.007 1.00 56.43 N
ATOM 15 C2 U B1603 1.059 26.207 120.174 1.00 56.78 C
ATOM 16 O2 U B1603 0.301 26.179 119.248 1.00 56.60 O
ATOM 17 N3 U B1603 0.654 26.589 121.429 1.00 57.36 N
ATOM 18 C4 U B1603 1.467 26.667 122.539 1.00 57.62 C
ATOM 19 O4 U B1603 1.022 27.011 123.635 1.00 58.16 O
ATOM 20 C5 U B1603 2.825 26.309 122.276 1.00 57.23 C
ATOM 21 C6 U B1603 3.232 25.958 121.065 1.00 56.67 C
ATOM 22 P C B1604 5.205 29.361 117.254 1.00 50.04 P
ATOM 23 OP1 C B1604 6.292 29.847 116.376 1.00 49.74 O
ATOM 24 OP2 C B1604 5.294 29.600 118.713 1.00 50.56 O
ATOM 25 O5' C B1604 3.798 29.872 116.734 1.00 50.23 O
TER
Atoms:
C2: (-0.891,29.631,118.827)
OP1: (6.292,29.847,116.376)
OP2: (5.294,29.600,118.713)
C4: (0.349,29.730,120.771)
O5': (3.798,29.872,116.734)
C3': (1.367,31.288,115.678)
C1': (0.120,29.528,116.640)
O4': (1.284,28.984,116.083)
C5': (3.423,29.786,115.379)
P: (5.205,29.361,117.254)
O2: (-1.943,29.625,118.172)
C4': (1.939,29.950,115.234)
C2': (-0.053,30.928,116.069)
O2': (-0.878,30.843,114.926)
N1: (0.265,29.562,118.096)
N3: (-0.831,29.706,120.171)
N4: (0.446,29.808,122.101)
C6: (1.463,29.594,118.695)
C5: (1.537,29.666,120.016)
O3': (1.427,32.278,114.666)
OP1: (6.292,29.847,116.376)
OP2: (5.294,29.600,118.713)
C4: (0.349,29.730,120.771)
O5': (3.798,29.872,116.734)
C3': (1.367,31.288,115.678)
C1': (0.120,29.528,116.640)
O4': (1.284,28.984,116.083)
C5': (3.423,29.786,115.379)
P: (5.205,29.361,117.254)
O2: (-1.943,29.625,118.172)
C4': (1.939,29.950,115.234)
C2': (-0.053,30.928,116.069)
O2': (-0.878,30.843,114.926)
N1: (0.265,29.562,118.096)
N3: (-0.831,29.706,120.171)
N4: (0.446,29.808,122.101)
C6: (1.463,29.594,118.695)
C5: (1.537,29.666,120.016)
O3': (1.427,32.278,114.666)
C4: (1.467,26.667,122.539)
N3: (0.654,26.589,121.429)
OP1: (8.770,26.343,120.772)
OP2: (6.877,26.754,122.434)
C2: (1.059,26.207,120.174)
C1': (2.847,25.487,118.656)
C3': (4.522,26.991,118.026)
O5': (6.365,26.301,120.018)
O4': (4.097,24.829,118.786)
C5': (6.407,25.491,118.859)
P: (7.376,26.071,121.220)
C4': (5.125,25.597,118.105)
C2': (3.072,26.699,117.752)
O2': (2.930,26.291,116.409)
N1: (2.383,25.887,120.007)
O4: (1.022,27.011,123.635)
O2: (0.301,26.179,119.248)
C6: (3.232,25.958,121.065)
C5: (2.825,26.309,122.276)
O3': (5.110,27.790,117.039)
N3: (0.654,26.589,121.429)
OP1: (8.770,26.343,120.772)
OP2: (6.877,26.754,122.434)
C2: (1.059,26.207,120.174)
C1': (2.847,25.487,118.656)
C3': (4.522,26.991,118.026)
O5': (6.365,26.301,120.018)
O4': (4.097,24.829,118.786)
C5': (6.407,25.491,118.859)
P: (7.376,26.071,121.220)
C4': (5.125,25.597,118.105)
C2': (3.072,26.699,117.752)
O2': (2.930,26.291,116.409)
N1: (2.383,25.887,120.007)
O4: (1.022,27.011,123.635)
O2: (0.301,26.179,119.248)
C6: (3.232,25.958,121.065)
C5: (2.825,26.309,122.276)
O3': (5.110,27.790,117.039)
Image (generated by PyMOL):