Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1XOK:A5:A4
Extra
PDB:
ATOM 1 O3' U A 4 40.845 18.224 26.422 1.00 40.82 O
ATOM 2 P C A 5 39.791 19.414 26.617 1.00 47.00 P
ATOM 3 OP1 C A 5 40.510 20.537 25.953 1.00 47.64 O
ATOM 4 OP2 C A 5 39.262 19.593 28.001 1.00 46.58 O
ATOM 5 O5' C A 5 38.449 18.965 25.870 1.00 45.21 O
ATOM 6 C5' C A 5 38.436 18.733 24.490 1.00 44.63 C
ATOM 7 C4' C A 5 37.166 17.994 24.298 1.00 43.31 C
ATOM 8 O4' C A 5 37.229 16.853 25.165 1.00 41.70 O
ATOM 9 C3' C A 5 35.984 18.744 24.855 1.00 44.40 C
ATOM 10 O3' C A 5 35.573 19.750 23.954 1.00 45.57 O
ATOM 11 C2' C A 5 35.030 17.559 24.871 1.00 44.87 C
ATOM 12 O2' C A 5 34.415 17.370 23.606 1.00 46.73 O
ATOM 13 C1' C A 5 35.919 16.379 25.322 1.00 42.44 C
ATOM 14 N1 C A 5 35.605 16.083 26.758 1.00 40.30 N
ATOM 15 C2 C A 5 34.507 15.272 27.055 1.00 38.80 C
ATOM 16 O2 C A 5 33.857 14.774 26.143 1.00 37.17 O
ATOM 17 N3 C A 5 34.182 15.039 28.349 1.00 39.43 N
ATOM 18 C4 C A 5 34.882 15.583 29.339 1.00 37.91 C
ATOM 19 N4 C A 5 34.493 15.298 30.582 1.00 36.60 N
ATOM 20 C5 C A 5 36.006 16.420 29.076 1.00 38.03 C
ATOM 21 C6 C A 5 36.321 16.641 27.787 1.00 39.60 C
ATOM 22 P A A 6 34.257 20.632 24.200 1.00 49.41 P
ATOM 23 OP1 A A 6 34.442 21.866 23.414 1.00 50.64 O
ATOM 24 OP2 A A 6 33.930 20.729 25.634 1.00 51.35 O
ATOM 25 O5' A A 6 33.041 19.846 23.540 1.00 50.90 O
TER
ATOM 1 O3' C B 3 42.922 16.529 31.706 1.00 38.11 O
ATOM 2 P U B 4 41.856 17.581 31.191 1.00 35.79 P
ATOM 3 OP1 U B 4 42.528 18.890 31.103 1.00 37.19 O
ATOM 4 OP2 U B 4 40.527 17.388 31.815 1.00 34.67 O
ATOM 5 O5' U B 4 41.641 17.092 29.711 1.00 38.25 O
ATOM 6 C5' U B 4 42.684 17.049 28.754 1.00 39.28 C
ATOM 7 C4' U B 4 41.974 16.449 27.569 1.00 40.77 C
ATOM 8 O4' U B 4 41.529 15.118 27.931 1.00 41.29 O
ATOM 9 C3' U B 4 40.676 17.174 27.296 1.00 40.63 C
ATOM 10 O3' U B 4 40.845 18.224 26.422 1.00 40.82 O
ATOM 11 C2' U B 4 39.846 16.129 26.614 1.00 41.36 C
ATOM 12 O2' U B 4 40.175 16.098 25.250 1.00 43.95 O
ATOM 13 C1' U B 4 40.301 14.847 27.279 1.00 41.59 C
ATOM 14 N1 U B 4 39.245 14.368 28.207 1.00 40.91 N
ATOM 15 C2 U B 4 38.182 13.641 27.702 1.00 40.02 C
ATOM 16 O2 U B 4 38.079 13.353 26.532 1.00 41.42 O
ATOM 17 N3 U B 4 37.232 13.240 28.606 1.00 37.93 N
ATOM 18 C4 U B 4 37.253 13.501 29.944 1.00 36.75 C
ATOM 19 O4 U B 4 36.362 13.087 30.633 1.00 35.62 O
ATOM 20 C5 U B 4 38.365 14.274 30.413 1.00 39.98 C
ATOM 21 C6 U B 4 39.309 14.677 29.545 1.00 41.83 C
ATOM 22 P C B 5 39.791 19.414 26.617 1.00 47.00 P
ATOM 23 OP1 C B 5 40.510 20.537 25.953 1.00 47.64 O
ATOM 24 OP2 C B 5 39.262 19.593 28.001 1.00 46.58 O
ATOM 25 O5' C B 5 38.449 18.965 25.870 1.00 45.21 O
TER
ATOM 2 P C A 5 39.791 19.414 26.617 1.00 47.00 P
ATOM 3 OP1 C A 5 40.510 20.537 25.953 1.00 47.64 O
ATOM 4 OP2 C A 5 39.262 19.593 28.001 1.00 46.58 O
ATOM 5 O5' C A 5 38.449 18.965 25.870 1.00 45.21 O
ATOM 6 C5' C A 5 38.436 18.733 24.490 1.00 44.63 C
ATOM 7 C4' C A 5 37.166 17.994 24.298 1.00 43.31 C
ATOM 8 O4' C A 5 37.229 16.853 25.165 1.00 41.70 O
ATOM 9 C3' C A 5 35.984 18.744 24.855 1.00 44.40 C
ATOM 10 O3' C A 5 35.573 19.750 23.954 1.00 45.57 O
ATOM 11 C2' C A 5 35.030 17.559 24.871 1.00 44.87 C
ATOM 12 O2' C A 5 34.415 17.370 23.606 1.00 46.73 O
ATOM 13 C1' C A 5 35.919 16.379 25.322 1.00 42.44 C
ATOM 14 N1 C A 5 35.605 16.083 26.758 1.00 40.30 N
ATOM 15 C2 C A 5 34.507 15.272 27.055 1.00 38.80 C
ATOM 16 O2 C A 5 33.857 14.774 26.143 1.00 37.17 O
ATOM 17 N3 C A 5 34.182 15.039 28.349 1.00 39.43 N
ATOM 18 C4 C A 5 34.882 15.583 29.339 1.00 37.91 C
ATOM 19 N4 C A 5 34.493 15.298 30.582 1.00 36.60 N
ATOM 20 C5 C A 5 36.006 16.420 29.076 1.00 38.03 C
ATOM 21 C6 C A 5 36.321 16.641 27.787 1.00 39.60 C
ATOM 22 P A A 6 34.257 20.632 24.200 1.00 49.41 P
ATOM 23 OP1 A A 6 34.442 21.866 23.414 1.00 50.64 O
ATOM 24 OP2 A A 6 33.930 20.729 25.634 1.00 51.35 O
ATOM 25 O5' A A 6 33.041 19.846 23.540 1.00 50.90 O
TER
ATOM 1 O3' C B 3 42.922 16.529 31.706 1.00 38.11 O
ATOM 2 P U B 4 41.856 17.581 31.191 1.00 35.79 P
ATOM 3 OP1 U B 4 42.528 18.890 31.103 1.00 37.19 O
ATOM 4 OP2 U B 4 40.527 17.388 31.815 1.00 34.67 O
ATOM 5 O5' U B 4 41.641 17.092 29.711 1.00 38.25 O
ATOM 6 C5' U B 4 42.684 17.049 28.754 1.00 39.28 C
ATOM 7 C4' U B 4 41.974 16.449 27.569 1.00 40.77 C
ATOM 8 O4' U B 4 41.529 15.118 27.931 1.00 41.29 O
ATOM 9 C3' U B 4 40.676 17.174 27.296 1.00 40.63 C
ATOM 10 O3' U B 4 40.845 18.224 26.422 1.00 40.82 O
ATOM 11 C2' U B 4 39.846 16.129 26.614 1.00 41.36 C
ATOM 12 O2' U B 4 40.175 16.098 25.250 1.00 43.95 O
ATOM 13 C1' U B 4 40.301 14.847 27.279 1.00 41.59 C
ATOM 14 N1 U B 4 39.245 14.368 28.207 1.00 40.91 N
ATOM 15 C2 U B 4 38.182 13.641 27.702 1.00 40.02 C
ATOM 16 O2 U B 4 38.079 13.353 26.532 1.00 41.42 O
ATOM 17 N3 U B 4 37.232 13.240 28.606 1.00 37.93 N
ATOM 18 C4 U B 4 37.253 13.501 29.944 1.00 36.75 C
ATOM 19 O4 U B 4 36.362 13.087 30.633 1.00 35.62 O
ATOM 20 C5 U B 4 38.365 14.274 30.413 1.00 39.98 C
ATOM 21 C6 U B 4 39.309 14.677 29.545 1.00 41.83 C
ATOM 22 P C B 5 39.791 19.414 26.617 1.00 47.00 P
ATOM 23 OP1 C B 5 40.510 20.537 25.953 1.00 47.64 O
ATOM 24 OP2 C B 5 39.262 19.593 28.001 1.00 46.58 O
ATOM 25 O5' C B 5 38.449 18.965 25.870 1.00 45.21 O
TER
Atoms:
C2: (34.507,15.272,27.055)
OP1: (40.510,20.537,25.953)
OP2: (39.262,19.593,28.001)
C4: (34.882,15.583,29.339)
O5': (38.449,18.965,25.870)
C3': (35.984,18.744,24.855)
C1': (35.919,16.379,25.322)
O4': (37.229,16.853,25.165)
C5': (38.436,18.733,24.490)
P: (39.791,19.414,26.617)
O2: (33.857,14.774,26.143)
C4': (37.166,17.994,24.298)
C2': (35.030,17.559,24.871)
O2': (34.415,17.370,23.606)
N1: (35.605,16.083,26.758)
N3: (34.182,15.039,28.349)
N4: (34.493,15.298,30.582)
C6: (36.321,16.641,27.787)
C5: (36.006,16.420,29.076)
O3': (35.573,19.750,23.954)
OP1: (40.510,20.537,25.953)
OP2: (39.262,19.593,28.001)
C4: (34.882,15.583,29.339)
O5': (38.449,18.965,25.870)
C3': (35.984,18.744,24.855)
C1': (35.919,16.379,25.322)
O4': (37.229,16.853,25.165)
C5': (38.436,18.733,24.490)
P: (39.791,19.414,26.617)
O2: (33.857,14.774,26.143)
C4': (37.166,17.994,24.298)
C2': (35.030,17.559,24.871)
O2': (34.415,17.370,23.606)
N1: (35.605,16.083,26.758)
N3: (34.182,15.039,28.349)
N4: (34.493,15.298,30.582)
C6: (36.321,16.641,27.787)
C5: (36.006,16.420,29.076)
O3': (35.573,19.750,23.954)
C4: (37.253,13.501,29.944)
N3: (37.232,13.240,28.606)
OP1: (42.528,18.890,31.103)
OP2: (40.527,17.388,31.815)
C2: (38.182,13.641,27.702)
C1': (40.301,14.847,27.279)
C3': (40.676,17.174,27.296)
O5': (41.641,17.092,29.711)
O4': (41.529,15.118,27.931)
C5': (42.684,17.049,28.754)
P: (41.856,17.581,31.191)
C4': (41.974,16.449,27.569)
C2': (39.846,16.129,26.614)
O2': (40.175,16.098,25.250)
N1: (39.245,14.368,28.207)
O4: (36.362,13.087,30.633)
O2: (38.079,13.353,26.532)
C6: (39.309,14.677,29.545)
C5: (38.365,14.274,30.413)
O3': (40.845,18.224,26.422)
N3: (37.232,13.240,28.606)
OP1: (42.528,18.890,31.103)
OP2: (40.527,17.388,31.815)
C2: (38.182,13.641,27.702)
C1': (40.301,14.847,27.279)
C3': (40.676,17.174,27.296)
O5': (41.641,17.092,29.711)
O4': (41.529,15.118,27.931)
C5': (42.684,17.049,28.754)
P: (41.856,17.581,31.191)
C4': (41.974,16.449,27.569)
C2': (39.846,16.129,26.614)
O2': (40.175,16.098,25.250)
N1: (39.245,14.368,28.207)
O4: (36.362,13.087,30.633)
O2: (38.079,13.353,26.532)
C6: (39.309,14.677,29.545)
C5: (38.365,14.274,30.413)
O3': (40.845,18.224,26.422)
Image (generated by PyMOL):