Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0499:0469
Extra
PDB:
ATOM 1 O3' U A 498 19.958 149.833 65.477 1.00 78.89 O
ATOM 2 P A A 499 19.052 149.462 64.206 1.00 77.24 P
ATOM 3 OP1 A A 499 17.909 150.408 64.141 1.00 76.55 O
ATOM 4 OP2 A A 499 18.789 147.998 64.310 1.00 78.38 O
ATOM 5 O5' A A 499 20.007 149.753 62.960 1.00 71.62 O
ATOM 6 C5' A A 499 20.736 150.991 62.863 1.00 63.62 C
ATOM 7 C4' A A 499 21.705 150.945 61.704 1.00 59.15 C
ATOM 8 O4' A A 499 20.979 150.724 60.467 1.00 57.68 O
ATOM 9 C3' A A 499 22.464 152.237 61.451 1.00 56.60 C
ATOM 10 O3' A A 499 23.604 152.343 62.292 1.00 54.80 O
ATOM 11 C2' A A 499 22.853 152.098 59.990 1.00 55.27 C
ATOM 12 O2' A A 499 23.941 151.227 59.819 1.00 56.04 O
ATOM 13 C1' A A 499 21.601 151.442 59.411 1.00 55.15 C
ATOM 14 N9 A A 499 20.656 152.433 58.896 1.00 53.36 N
ATOM 15 C8 A A 499 19.503 152.898 59.476 1.00 53.01 C
ATOM 16 N7 A A 499 18.894 153.820 58.776 1.00 52.05 N
ATOM 17 C5 A A 499 19.692 153.967 57.653 1.00 52.68 C
ATOM 18 C6 A A 499 19.596 154.799 56.524 1.00 52.36 C
ATOM 19 N6 A A 499 18.611 155.671 56.330 1.00 52.17 N
ATOM 20 N1 A A 499 20.562 154.703 55.589 1.00 52.61 N
ATOM 21 C2 A A 499 21.550 153.827 55.780 1.00 53.80 C
ATOM 22 N3 A A 499 21.751 152.989 56.795 1.00 54.04 N
ATOM 23 C4 A A 499 20.776 153.112 57.710 1.00 53.13 C
ATOM 24 P G A 500 23.829 153.668 63.162 1.00 51.13 P
ATOM 25 OP1 G A 500 24.999 153.416 64.028 1.00 51.51 O
ATOM 26 OP2 G A 500 22.545 154.068 63.775 1.00 51.31 O
ATOM 27 O5' G A 500 24.208 154.762 62.076 1.00 52.16 O
TER
ATOM 1 O3' C B 468 29.423 147.132 54.423 1.00 43.81 O
ATOM 2 P U B 469 29.306 148.687 54.050 1.00 44.25 P
ATOM 3 OP1 U B 469 29.226 148.747 52.573 1.00 45.36 O
ATOM 4 OP2 U B 469 30.374 149.431 54.762 1.00 44.95 O
ATOM 5 O5' U B 469 27.911 149.142 54.660 1.00 43.84 O
ATOM 6 C5' U B 469 27.703 149.117 56.071 1.00 45.48 C
ATOM 7 C4' U B 469 26.726 150.190 56.477 1.00 46.57 C
ATOM 8 O4' U B 469 27.293 151.502 56.232 1.00 47.66 O
ATOM 9 C3' U B 469 25.420 150.205 55.713 1.00 46.07 C
ATOM 10 O3' U B 469 24.522 149.213 56.203 1.00 43.84 O
ATOM 11 C2' U B 469 24.937 151.633 55.940 1.00 48.26 C
ATOM 12 O2' U B 469 24.340 151.830 57.209 1.00 48.28 O
ATOM 13 C1' U B 469 26.258 152.409 55.886 1.00 48.13 C
ATOM 14 N1 U B 469 26.576 153.017 54.582 1.00 48.90 N
ATOM 15 C2 U B 469 25.823 154.107 54.167 1.00 48.42 C
ATOM 16 O2 U B 469 24.911 154.573 54.820 1.00 47.43 O
ATOM 17 N3 U B 469 26.185 154.635 52.954 1.00 49.13 N
ATOM 18 C4 U B 469 27.202 154.202 52.128 1.00 50.75 C
ATOM 19 O4 U B 469 27.448 154.823 51.089 1.00 51.36 O
ATOM 20 C5 U B 469 27.928 153.071 52.620 1.00 50.86 C
ATOM 21 C6 U B 469 27.597 152.530 53.798 1.00 49.76 C
ATOM 22 P G B 470 23.840 148.195 55.172 1.00 43.77 P
ATOM 23 OP1 G B 470 22.955 147.280 55.922 1.00 42.13 O
ATOM 24 OP2 G B 470 24.897 147.640 54.288 1.00 42.09 O
ATOM 25 O5' G B 470 22.918 149.149 54.300 1.00 45.45 O
TER
ATOM 2 P A A 499 19.052 149.462 64.206 1.00 77.24 P
ATOM 3 OP1 A A 499 17.909 150.408 64.141 1.00 76.55 O
ATOM 4 OP2 A A 499 18.789 147.998 64.310 1.00 78.38 O
ATOM 5 O5' A A 499 20.007 149.753 62.960 1.00 71.62 O
ATOM 6 C5' A A 499 20.736 150.991 62.863 1.00 63.62 C
ATOM 7 C4' A A 499 21.705 150.945 61.704 1.00 59.15 C
ATOM 8 O4' A A 499 20.979 150.724 60.467 1.00 57.68 O
ATOM 9 C3' A A 499 22.464 152.237 61.451 1.00 56.60 C
ATOM 10 O3' A A 499 23.604 152.343 62.292 1.00 54.80 O
ATOM 11 C2' A A 499 22.853 152.098 59.990 1.00 55.27 C
ATOM 12 O2' A A 499 23.941 151.227 59.819 1.00 56.04 O
ATOM 13 C1' A A 499 21.601 151.442 59.411 1.00 55.15 C
ATOM 14 N9 A A 499 20.656 152.433 58.896 1.00 53.36 N
ATOM 15 C8 A A 499 19.503 152.898 59.476 1.00 53.01 C
ATOM 16 N7 A A 499 18.894 153.820 58.776 1.00 52.05 N
ATOM 17 C5 A A 499 19.692 153.967 57.653 1.00 52.68 C
ATOM 18 C6 A A 499 19.596 154.799 56.524 1.00 52.36 C
ATOM 19 N6 A A 499 18.611 155.671 56.330 1.00 52.17 N
ATOM 20 N1 A A 499 20.562 154.703 55.589 1.00 52.61 N
ATOM 21 C2 A A 499 21.550 153.827 55.780 1.00 53.80 C
ATOM 22 N3 A A 499 21.751 152.989 56.795 1.00 54.04 N
ATOM 23 C4 A A 499 20.776 153.112 57.710 1.00 53.13 C
ATOM 24 P G A 500 23.829 153.668 63.162 1.00 51.13 P
ATOM 25 OP1 G A 500 24.999 153.416 64.028 1.00 51.51 O
ATOM 26 OP2 G A 500 22.545 154.068 63.775 1.00 51.31 O
ATOM 27 O5' G A 500 24.208 154.762 62.076 1.00 52.16 O
TER
ATOM 1 O3' C B 468 29.423 147.132 54.423 1.00 43.81 O
ATOM 2 P U B 469 29.306 148.687 54.050 1.00 44.25 P
ATOM 3 OP1 U B 469 29.226 148.747 52.573 1.00 45.36 O
ATOM 4 OP2 U B 469 30.374 149.431 54.762 1.00 44.95 O
ATOM 5 O5' U B 469 27.911 149.142 54.660 1.00 43.84 O
ATOM 6 C5' U B 469 27.703 149.117 56.071 1.00 45.48 C
ATOM 7 C4' U B 469 26.726 150.190 56.477 1.00 46.57 C
ATOM 8 O4' U B 469 27.293 151.502 56.232 1.00 47.66 O
ATOM 9 C3' U B 469 25.420 150.205 55.713 1.00 46.07 C
ATOM 10 O3' U B 469 24.522 149.213 56.203 1.00 43.84 O
ATOM 11 C2' U B 469 24.937 151.633 55.940 1.00 48.26 C
ATOM 12 O2' U B 469 24.340 151.830 57.209 1.00 48.28 O
ATOM 13 C1' U B 469 26.258 152.409 55.886 1.00 48.13 C
ATOM 14 N1 U B 469 26.576 153.017 54.582 1.00 48.90 N
ATOM 15 C2 U B 469 25.823 154.107 54.167 1.00 48.42 C
ATOM 16 O2 U B 469 24.911 154.573 54.820 1.00 47.43 O
ATOM 17 N3 U B 469 26.185 154.635 52.954 1.00 49.13 N
ATOM 18 C4 U B 469 27.202 154.202 52.128 1.00 50.75 C
ATOM 19 O4 U B 469 27.448 154.823 51.089 1.00 51.36 O
ATOM 20 C5 U B 469 27.928 153.071 52.620 1.00 50.86 C
ATOM 21 C6 U B 469 27.597 152.530 53.798 1.00 49.76 C
ATOM 22 P G B 470 23.840 148.195 55.172 1.00 43.77 P
ATOM 23 OP1 G B 470 22.955 147.280 55.922 1.00 42.13 O
ATOM 24 OP2 G B 470 24.897 147.640 54.288 1.00 42.09 O
ATOM 25 O5' G B 470 22.918 149.149 54.300 1.00 45.45 O
TER
Atoms:
OP1: (17.909,150.408,64.141)
OP2: (18.789,147.998,64.310)
C3': (22.464,152.237,61.451)
C1': (21.601,151.442,59.411)
C5': (20.736,150.991,62.863)
O4': (20.979,150.724,60.467)
C8: (19.503,152.898,59.476)
O2': (23.941,151.227,59.819)
C6: (19.596,154.799,56.524)
C5: (19.692,153.967,57.653)
C4: (20.776,153.112,57.710)
P: (19.052,149.462,64.206)
C4': (21.705,150.945,61.704)
C2': (22.853,152.098,59.990)
C2: (21.550,153.827,55.780)
N1: (20.562,154.703,55.589)
N3: (21.751,152.989,56.795)
N6: (18.611,155.671,56.330)
N7: (18.894,153.820,58.776)
N9: (20.656,152.433,58.896)
O5': (20.007,149.753,62.960)
O3': (23.604,152.343,62.292)
OP2: (18.789,147.998,64.310)
C3': (22.464,152.237,61.451)
C1': (21.601,151.442,59.411)
C5': (20.736,150.991,62.863)
O4': (20.979,150.724,60.467)
C8: (19.503,152.898,59.476)
O2': (23.941,151.227,59.819)
C6: (19.596,154.799,56.524)
C5: (19.692,153.967,57.653)
C4: (20.776,153.112,57.710)
P: (19.052,149.462,64.206)
C4': (21.705,150.945,61.704)
C2': (22.853,152.098,59.990)
C2: (21.550,153.827,55.780)
N1: (20.562,154.703,55.589)
N3: (21.751,152.989,56.795)
N6: (18.611,155.671,56.330)
N7: (18.894,153.820,58.776)
N9: (20.656,152.433,58.896)
O5': (20.007,149.753,62.960)
O3': (23.604,152.343,62.292)
C4: (27.202,154.202,52.128)
N3: (26.185,154.635,52.954)
OP1: (29.226,148.747,52.573)
OP2: (30.374,149.431,54.762)
C2: (25.823,154.107,54.167)
C1': (26.258,152.409,55.886)
C3': (25.420,150.205,55.713)
O5': (27.911,149.142,54.660)
O4': (27.293,151.502,56.232)
C5': (27.703,149.117,56.071)
P: (29.306,148.687,54.050)
C4': (26.726,150.190,56.477)
C2': (24.937,151.633,55.940)
O2': (24.340,151.830,57.209)
N1: (26.576,153.017,54.582)
O4: (27.448,154.823,51.089)
O2: (24.911,154.573,54.820)
C6: (27.597,152.530,53.798)
C5: (27.928,153.071,52.620)
O3': (24.522,149.213,56.203)
N3: (26.185,154.635,52.954)
OP1: (29.226,148.747,52.573)
OP2: (30.374,149.431,54.762)
C2: (25.823,154.107,54.167)
C1': (26.258,152.409,55.886)
C3': (25.420,150.205,55.713)
O5': (27.911,149.142,54.660)
O4': (27.293,151.502,56.232)
C5': (27.703,149.117,56.071)
P: (29.306,148.687,54.050)
C4': (26.726,150.190,56.477)
C2': (24.937,151.633,55.940)
O2': (24.340,151.830,57.209)
N1: (26.576,153.017,54.582)
O4: (27.448,154.823,51.089)
O2: (24.911,154.573,54.820)
C6: (27.597,152.530,53.798)
C5: (27.928,153.071,52.620)
O3': (24.522,149.213,56.203)
Image (generated by PyMOL):