ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Q86:A338:A337

Extra

PDB:
ATOM 1 O3' U A 337 27.650 128.182 10.890 1.00 76.08 O
ATOM 2 P C A 338 29.242 128.019 10.749 1.00 77.98 P
ATOM 3 OP1 C A 338 29.525 127.440 9.415 1.00 78.38 O
ATOM 4 OP2 C A 338 29.748 127.329 11.963 1.00 77.21 O
ATOM 5 O5' C A 338 29.767 129.527 10.750 1.00 80.27 O
ATOM 6 C5' C A 338 29.328 130.464 9.738 1.00 82.62 C
ATOM 7 C4' C A 338 29.839 131.864 10.030 1.00 84.13 C
ATOM 8 O4' C A 338 29.248 132.367 11.260 1.00 84.46 O
ATOM 9 C3' C A 338 31.337 132.026 10.246 1.00 84.48 C
ATOM 10 O3' C A 338 32.069 132.094 9.027 1.00 85.02 O
ATOM 11 C2' C A 338 31.406 133.338 11.009 1.00 84.98 C
ATOM 12 O2' C A 338 31.266 134.464 10.167 1.00 84.63 O
ATOM 13 C1' C A 338 30.181 133.218 11.918 1.00 85.52 C
ATOM 14 N1 C A 338 30.504 132.652 13.251 1.00 85.87 N
ATOM 15 C2 C A 338 30.981 133.515 14.260 1.00 85.39 C
ATOM 16 O2 C A 338 31.135 134.719 14.007 1.00 84.25 O
ATOM 17 N3 C A 338 31.265 133.009 15.481 1.00 85.31 N
ATOM 18 C4 C A 338 31.099 131.706 15.719 1.00 85.59 C
ATOM 19 N4 C A 338 31.387 131.253 16.938 1.00 85.35 N
ATOM 20 C5 C A 338 30.629 130.808 14.716 1.00 85.38 C
ATOM 21 C6 C A 338 30.345 131.318 13.509 1.00 85.45 C
ATOM 22 P G A 339 33.643 131.763 9.024 1.00 86.15 P
ATOM 23 OP1 G A 339 34.071 131.638 7.609 1.00 87.05 O
ATOM 24 OP2 G A 339 33.874 130.631 9.959 1.00 86.51 O
ATOM 25 O5' G A 339 34.324 133.064 9.650 1.00 85.32 O
TER

ATOM 1 O3' C B 336 24.798 125.512 15.636 1.00 66.79 O
ATOM 2 P U B 337 26.284 125.514 15.039 1.00 70.91 P
ATOM 3 OP1 U B 337 26.416 124.320 14.164 1.00 70.06 O
ATOM 4 OP2 U B 337 27.242 125.705 16.158 1.00 72.13 O
ATOM 5 O5' U B 337 26.318 126.825 14.135 1.00 72.38 O
ATOM 6 C5' U B 337 25.493 126.937 12.954 1.00 75.34 C
ATOM 7 C4' U B 337 25.665 128.299 12.316 1.00 76.02 C
ATOM 8 O4' U B 337 25.117 129.321 13.191 1.00 76.51 O
ATOM 9 C3' U B 337 27.105 128.727 12.086 1.00 75.90 C
ATOM 10 O3' U B 337 27.650 128.182 10.890 1.00 76.08 O
ATOM 11 C2' U B 337 26.995 130.242 12.057 1.00 75.99 C
ATOM 12 O2' U B 337 26.558 130.736 10.808 1.00 75.07 O
ATOM 13 C1' U B 337 25.931 130.481 13.135 1.00 76.91 C
ATOM 14 N1 U B 337 26.520 130.702 14.467 1.00 77.36 N
ATOM 15 C2 U B 337 26.885 131.993 14.807 1.00 77.49 C
ATOM 16 O2 U B 337 26.714 132.949 14.072 1.00 78.62 O
ATOM 17 N3 U B 337 27.467 132.124 16.042 1.00 77.85 N
ATOM 18 C4 U B 337 27.713 131.122 16.957 1.00 78.38 C
ATOM 19 O4 U B 337 28.303 131.392 18.006 1.00 78.16 O
ATOM 20 C5 U B 337 27.287 129.822 16.545 1.00 78.47 C
ATOM 21 C6 U B 337 26.720 129.660 15.347 1.00 77.45 C
ATOM 22 P C B 338 29.242 128.019 10.749 1.00 77.98 P
ATOM 23 OP1 C B 338 29.525 127.440 9.415 1.00 78.38 O
ATOM 24 OP2 C B 338 29.748 127.329 11.963 1.00 77.21 O
ATOM 25 O5' C B 338 29.767 129.527 10.750 1.00 80.27 O
TER

Atoms:
C2: (30.981,133.515,14.260)
OP1: (29.525,127.440,9.415)
OP2: (29.748,127.329,11.963)
C4: (31.099,131.706,15.719)
O5': (29.767,129.527,10.750)
C3': (31.337,132.026,10.246)
C1': (30.181,133.218,11.918)
O4': (29.248,132.367,11.260)
C5': (29.328,130.464,9.738)
P: (29.242,128.019,10.749)
O2: (31.135,134.719,14.007)
C4': (29.839,131.864,10.030)
C2': (31.406,133.338,11.009)
O2': (31.266,134.464,10.167)
N1: (30.504,132.652,13.251)
N3: (31.265,133.009,15.481)
N4: (31.387,131.253,16.938)
C6: (30.345,131.318,13.509)
C5: (30.629,130.808,14.716)
O3': (32.069,132.094,9.027)
C4: (27.713,131.122,16.957)
N3: (27.467,132.124,16.042)
OP1: (26.416,124.320,14.164)
OP2: (27.242,125.705,16.158)
C2: (26.885,131.993,14.807)
C1': (25.931,130.481,13.135)
C3': (27.105,128.727,12.086)
O5': (26.318,126.825,14.135)
O4': (25.117,129.321,13.191)
C5': (25.493,126.937,12.954)
P: (26.284,125.514,15.039)
C4': (25.665,128.299,12.316)
C2': (26.995,130.242,12.057)
O2': (26.558,130.736,10.808)
N1: (26.520,130.702,14.467)
O4: (28.303,131.392,18.006)
O2: (26.714,132.949,14.072)
C6: (26.720,129.660,15.347)
C5: (27.287,129.822,16.545)
O3': (27.650,128.182,10.890)
Image (generated by PyMOL):
PyMOL image
show in jmol