Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXB:A39:B5
Extra
PDB:
ATOM 1 O3' C A 38 -21.036 -52.274 14.239 1.00 98.57 O
ATOM 2 P A A 39 -22.630 -52.167 14.256 1.00 98.24 P
ATOM 3 OP1 A A 39 -23.107 -53.213 15.186 1.00 99.74 O
ATOM 4 OP2 A A 39 -23.150 -52.099 12.867 1.00 98.47 O
ATOM 5 O5' A A 39 -22.872 -50.729 14.898 1.00 95.58 O
ATOM 6 C5' A A 39 -22.757 -50.534 16.301 1.00 94.36 C
ATOM 7 C4' A A 39 -23.087 -49.097 16.647 1.00 91.63 C
ATOM 8 O4' A A 39 -22.089 -48.220 16.081 1.00 90.63 O
ATOM 9 C3' A A 39 -24.369 -48.557 16.041 1.00 90.66 C
ATOM 10 O3' A A 39 -25.475 -49.009 16.784 1.00 90.52 O
ATOM 11 C2' A A 39 -24.148 -47.066 16.217 1.00 88.86 C
ATOM 12 O2' A A 39 -24.330 -46.652 17.559 1.00 88.00 O
ATOM 13 C1' A A 39 -22.677 -46.954 15.844 1.00 89.14 C
ATOM 14 N9 A A 39 -22.420 -46.562 14.458 1.00 89.68 N
ATOM 15 C8 A A 39 -22.117 -47.388 13.413 1.00 91.51 C
ATOM 16 N7 A A 39 -21.918 -46.764 12.275 1.00 91.71 N
ATOM 17 C5 A A 39 -22.103 -45.431 12.589 1.00 89.92 C
ATOM 18 C6 A A 39 -22.031 -44.250 11.814 1.00 89.50 C
ATOM 19 N6 A A 39 -21.747 -44.238 10.507 1.00 90.71 N
ATOM 20 N1 A A 39 -22.269 -43.075 12.434 1.00 87.88 N
ATOM 21 C2 A A 39 -22.556 -43.086 13.743 1.00 87.07 C
ATOM 22 N3 A A 39 -22.648 -44.128 14.573 1.00 87.53 N
ATOM 23 C4 A A 39 -22.410 -45.286 13.932 1.00 88.84 C
ATOM 24 P A A 40 -26.847 -49.357 16.045 1.00 90.52 P
ATOM 25 OP1 A A 40 -27.657 -50.097 17.038 1.00 90.75 O
ATOM 26 OP2 A A 40 -26.568 -49.940 14.709 1.00 91.73 O
ATOM 27 O5' A A 40 -27.491 -47.922 15.781 1.00 88.34 O
TER
ATOM 1 O3' C B 4 -29.550 -40.992 20.329 1.00 84.92 O
ATOM 2 P U B 5 -28.278 -41.365 21.214 1.00 83.79 P
ATOM 3 OP1 U B 5 -28.631 -42.505 22.085 1.00 84.08 O
ATOM 4 OP2 U B 5 -27.754 -40.113 21.801 1.00 84.30 O
ATOM 5 O5' U B 5 -27.211 -41.865 20.143 1.00 83.67 O
ATOM 6 C5' U B 5 -27.347 -43.130 19.524 1.00 83.25 C
ATOM 7 C4' U B 5 -26.260 -43.291 18.485 1.00 82.99 C
ATOM 8 O4' U B 5 -26.362 -42.243 17.483 1.00 83.99 O
ATOM 9 C3' U B 5 -24.840 -43.151 19.004 1.00 82.01 C
ATOM 10 O3' U B 5 -24.427 -44.327 19.657 1.00 81.57 O
ATOM 11 C2' U B 5 -24.105 -42.913 17.693 1.00 82.30 C
ATOM 12 O2' U B 5 -23.984 -44.071 16.896 1.00 81.82 O
ATOM 13 C1' U B 5 -25.058 -41.934 17.010 1.00 83.59 C
ATOM 14 N1 U B 5 -24.687 -40.495 17.280 1.00 84.03 N
ATOM 15 C2 U B 5 -23.613 -39.943 16.606 1.00 83.64 C
ATOM 16 O2 U B 5 -22.951 -40.554 15.793 1.00 83.74 O
ATOM 17 N3 U B 5 -23.333 -38.635 16.909 1.00 83.77 N
ATOM 18 C4 U B 5 -24.003 -37.833 17.809 1.00 84.53 C
ATOM 19 O4 U B 5 -23.639 -36.675 17.979 1.00 85.22 O
ATOM 20 C5 U B 5 -25.106 -38.473 18.481 1.00 84.96 C
ATOM 21 C6 U B 5 -25.403 -39.747 18.198 1.00 84.60 C
ATOM 22 P G B 6 -23.406 -44.252 20.888 1.00 81.87 P
ATOM 23 OP1 G B 6 -23.603 -45.464 21.711 1.00 82.14 O
ATOM 24 OP2 G B 6 -23.483 -42.922 21.531 1.00 82.30 O
ATOM 25 O5' G B 6 -21.983 -44.341 20.171 1.00 81.80 O
TER
ATOM 2 P A A 39 -22.630 -52.167 14.256 1.00 98.24 P
ATOM 3 OP1 A A 39 -23.107 -53.213 15.186 1.00 99.74 O
ATOM 4 OP2 A A 39 -23.150 -52.099 12.867 1.00 98.47 O
ATOM 5 O5' A A 39 -22.872 -50.729 14.898 1.00 95.58 O
ATOM 6 C5' A A 39 -22.757 -50.534 16.301 1.00 94.36 C
ATOM 7 C4' A A 39 -23.087 -49.097 16.647 1.00 91.63 C
ATOM 8 O4' A A 39 -22.089 -48.220 16.081 1.00 90.63 O
ATOM 9 C3' A A 39 -24.369 -48.557 16.041 1.00 90.66 C
ATOM 10 O3' A A 39 -25.475 -49.009 16.784 1.00 90.52 O
ATOM 11 C2' A A 39 -24.148 -47.066 16.217 1.00 88.86 C
ATOM 12 O2' A A 39 -24.330 -46.652 17.559 1.00 88.00 O
ATOM 13 C1' A A 39 -22.677 -46.954 15.844 1.00 89.14 C
ATOM 14 N9 A A 39 -22.420 -46.562 14.458 1.00 89.68 N
ATOM 15 C8 A A 39 -22.117 -47.388 13.413 1.00 91.51 C
ATOM 16 N7 A A 39 -21.918 -46.764 12.275 1.00 91.71 N
ATOM 17 C5 A A 39 -22.103 -45.431 12.589 1.00 89.92 C
ATOM 18 C6 A A 39 -22.031 -44.250 11.814 1.00 89.50 C
ATOM 19 N6 A A 39 -21.747 -44.238 10.507 1.00 90.71 N
ATOM 20 N1 A A 39 -22.269 -43.075 12.434 1.00 87.88 N
ATOM 21 C2 A A 39 -22.556 -43.086 13.743 1.00 87.07 C
ATOM 22 N3 A A 39 -22.648 -44.128 14.573 1.00 87.53 N
ATOM 23 C4 A A 39 -22.410 -45.286 13.932 1.00 88.84 C
ATOM 24 P A A 40 -26.847 -49.357 16.045 1.00 90.52 P
ATOM 25 OP1 A A 40 -27.657 -50.097 17.038 1.00 90.75 O
ATOM 26 OP2 A A 40 -26.568 -49.940 14.709 1.00 91.73 O
ATOM 27 O5' A A 40 -27.491 -47.922 15.781 1.00 88.34 O
TER
ATOM 1 O3' C B 4 -29.550 -40.992 20.329 1.00 84.92 O
ATOM 2 P U B 5 -28.278 -41.365 21.214 1.00 83.79 P
ATOM 3 OP1 U B 5 -28.631 -42.505 22.085 1.00 84.08 O
ATOM 4 OP2 U B 5 -27.754 -40.113 21.801 1.00 84.30 O
ATOM 5 O5' U B 5 -27.211 -41.865 20.143 1.00 83.67 O
ATOM 6 C5' U B 5 -27.347 -43.130 19.524 1.00 83.25 C
ATOM 7 C4' U B 5 -26.260 -43.291 18.485 1.00 82.99 C
ATOM 8 O4' U B 5 -26.362 -42.243 17.483 1.00 83.99 O
ATOM 9 C3' U B 5 -24.840 -43.151 19.004 1.00 82.01 C
ATOM 10 O3' U B 5 -24.427 -44.327 19.657 1.00 81.57 O
ATOM 11 C2' U B 5 -24.105 -42.913 17.693 1.00 82.30 C
ATOM 12 O2' U B 5 -23.984 -44.071 16.896 1.00 81.82 O
ATOM 13 C1' U B 5 -25.058 -41.934 17.010 1.00 83.59 C
ATOM 14 N1 U B 5 -24.687 -40.495 17.280 1.00 84.03 N
ATOM 15 C2 U B 5 -23.613 -39.943 16.606 1.00 83.64 C
ATOM 16 O2 U B 5 -22.951 -40.554 15.793 1.00 83.74 O
ATOM 17 N3 U B 5 -23.333 -38.635 16.909 1.00 83.77 N
ATOM 18 C4 U B 5 -24.003 -37.833 17.809 1.00 84.53 C
ATOM 19 O4 U B 5 -23.639 -36.675 17.979 1.00 85.22 O
ATOM 20 C5 U B 5 -25.106 -38.473 18.481 1.00 84.96 C
ATOM 21 C6 U B 5 -25.403 -39.747 18.198 1.00 84.60 C
ATOM 22 P G B 6 -23.406 -44.252 20.888 1.00 81.87 P
ATOM 23 OP1 G B 6 -23.603 -45.464 21.711 1.00 82.14 O
ATOM 24 OP2 G B 6 -23.483 -42.922 21.531 1.00 82.30 O
ATOM 25 O5' G B 6 -21.983 -44.341 20.171 1.00 81.80 O
TER
Atoms:
OP1: (-23.107,-53.213,15.186)
OP2: (-23.150,-52.099,12.867)
C3': (-24.369,-48.557,16.041)
C1': (-22.677,-46.954,15.844)
C5': (-22.757,-50.534,16.301)
O4': (-22.089,-48.220,16.081)
C8: (-22.117,-47.388,13.413)
O2': (-24.330,-46.652,17.559)
C6: (-22.031,-44.250,11.814)
C5: (-22.103,-45.431,12.589)
C4: (-22.410,-45.286,13.932)
P: (-22.630,-52.167,14.256)
C4': (-23.087,-49.097,16.647)
C2': (-24.148,-47.066,16.217)
C2: (-22.556,-43.086,13.743)
N1: (-22.269,-43.075,12.434)
N3: (-22.648,-44.128,14.573)
N6: (-21.747,-44.238,10.507)
N7: (-21.918,-46.764,12.275)
N9: (-22.420,-46.562,14.458)
O5': (-22.872,-50.729,14.898)
O3': (-25.475,-49.009,16.784)
OP2: (-23.150,-52.099,12.867)
C3': (-24.369,-48.557,16.041)
C1': (-22.677,-46.954,15.844)
C5': (-22.757,-50.534,16.301)
O4': (-22.089,-48.220,16.081)
C8: (-22.117,-47.388,13.413)
O2': (-24.330,-46.652,17.559)
C6: (-22.031,-44.250,11.814)
C5: (-22.103,-45.431,12.589)
C4: (-22.410,-45.286,13.932)
P: (-22.630,-52.167,14.256)
C4': (-23.087,-49.097,16.647)
C2': (-24.148,-47.066,16.217)
C2: (-22.556,-43.086,13.743)
N1: (-22.269,-43.075,12.434)
N3: (-22.648,-44.128,14.573)
N6: (-21.747,-44.238,10.507)
N7: (-21.918,-46.764,12.275)
N9: (-22.420,-46.562,14.458)
O5': (-22.872,-50.729,14.898)
O3': (-25.475,-49.009,16.784)
C4: (-24.003,-37.833,17.809)
N3: (-23.333,-38.635,16.909)
OP1: (-28.631,-42.505,22.085)
OP2: (-27.754,-40.113,21.801)
C2: (-23.613,-39.943,16.606)
C1': (-25.058,-41.934,17.010)
C3': (-24.840,-43.151,19.004)
O5': (-27.211,-41.865,20.143)
O4': (-26.362,-42.243,17.483)
C5': (-27.347,-43.130,19.524)
P: (-28.278,-41.365,21.214)
C4': (-26.260,-43.291,18.485)
C2': (-24.105,-42.913,17.693)
O2': (-23.984,-44.071,16.896)
N1: (-24.687,-40.495,17.280)
O4: (-23.639,-36.675,17.979)
O2: (-22.951,-40.554,15.793)
C6: (-25.403,-39.747,18.198)
C5: (-25.106,-38.473,18.481)
O3': (-24.427,-44.327,19.657)
N3: (-23.333,-38.635,16.909)
OP1: (-28.631,-42.505,22.085)
OP2: (-27.754,-40.113,21.801)
C2: (-23.613,-39.943,16.606)
C1': (-25.058,-41.934,17.010)
C3': (-24.840,-43.151,19.004)
O5': (-27.211,-41.865,20.143)
O4': (-26.362,-42.243,17.483)
C5': (-27.347,-43.130,19.524)
P: (-28.278,-41.365,21.214)
C4': (-26.260,-43.291,18.485)
C2': (-24.105,-42.913,17.693)
O2': (-23.984,-44.071,16.896)
N1: (-24.687,-40.495,17.280)
O4: (-23.639,-36.675,17.979)
O2: (-22.951,-40.554,15.793)
C6: (-25.403,-39.747,18.198)
C5: (-25.106,-38.473,18.481)
O3': (-24.427,-44.327,19.657)
Image (generated by PyMOL):