Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12434:12433
Extra
PDB:
ATOM 1 O3' U A2433 -8.642 -71.316 39.042 1.00 63.85 O
ATOM 2 P C A2434 -7.561 -71.815 37.948 1.00 62.55 P
ATOM 3 OP1 C A2434 -6.718 -72.855 38.595 1.00 62.62 O
ATOM 4 OP2 C A2434 -6.910 -70.613 37.415 1.00 62.07 O
ATOM 5 O5' C A2434 -8.451 -72.471 36.817 1.00 63.28 O
ATOM 6 C5' C A2434 -8.884 -73.809 36.923 1.00 63.89 C
ATOM 7 C4' C A2434 -9.241 -74.360 35.575 1.00 64.52 C
ATOM 8 O4' C A2434 -10.340 -73.594 35.002 1.00 64.62 O
ATOM 9 C3' C A2434 -8.155 -74.272 34.526 1.00 64.50 C
ATOM 10 O3' C A2434 -7.188 -75.305 34.650 1.00 64.67 O
ATOM 11 C2' C A2434 -8.952 -74.331 33.232 1.00 65.04 C
ATOM 12 O2' C A2434 -9.335 -75.661 32.974 1.00 65.75 O
ATOM 13 C1' C A2434 -10.203 -73.525 33.603 1.00 64.92 C
ATOM 14 N1 C A2434 -10.067 -72.111 33.229 1.00 64.43 N
ATOM 15 C2 C A2434 -10.060 -71.750 31.885 1.00 64.65 C
ATOM 16 O2 C A2434 -10.199 -72.606 31.027 1.00 65.25 O
ATOM 17 N3 C A2434 -9.892 -70.470 31.501 1.00 64.22 N
ATOM 18 C4 C A2434 -9.726 -69.543 32.424 1.00 63.58 C
ATOM 19 N4 C A2434 -9.554 -68.308 31.963 1.00 63.21 N
ATOM 20 C5 C A2434 -9.730 -69.861 33.826 1.00 63.33 C
ATOM 21 C6 C A2434 -9.896 -71.146 34.187 1.00 63.76 C
ATOM 22 P U A2435 -5.730 -75.142 33.989 1.00 60.21 P
ATOM 23 OP1 U A2435 -4.997 -76.386 34.271 1.00 60.50 O
ATOM 24 OP2 U A2435 -5.177 -73.861 34.465 1.00 59.45 O
ATOM 25 O5' U A2435 -6.024 -75.039 32.427 1.00 60.65 O
TER
ATOM 1 O3' A B2432 -10.891 -66.047 39.811 1.00 78.89 O
ATOM 2 P U B2433 -9.291 -66.212 39.882 1.00 61.94 P
ATOM 3 OP1 U B2433 -8.876 -65.733 41.224 1.00 61.39 O
ATOM 4 OP2 U B2433 -8.719 -65.549 38.664 1.00 61.85 O
ATOM 5 O5' U B2433 -9.083 -67.789 39.759 1.00 62.48 O
ATOM 6 C5' U B2433 -9.767 -68.690 40.615 1.00 62.78 C
ATOM 7 C4' U B2433 -10.426 -69.808 39.845 1.00 63.52 C
ATOM 8 O4' U B2433 -11.649 -69.320 39.234 1.00 63.78 O
ATOM 9 C3' U B2433 -9.651 -70.388 38.670 1.00 63.82 C
ATOM 10 O3' U B2433 -8.642 -71.316 39.042 1.00 63.85 O
ATOM 11 C2' U B2433 -10.769 -71.013 37.854 1.00 64.52 C
ATOM 12 O2' U B2433 -11.209 -72.220 38.462 1.00 64.95 O
ATOM 13 C1' U B2433 -11.862 -69.971 38.011 1.00 64.35 C
ATOM 14 N1 U B2433 -11.794 -68.985 36.953 1.00 64.22 N
ATOM 15 C2 U B2433 -12.422 -69.321 35.783 1.00 64.79 C
ATOM 16 O2 U B2433 -13.035 -70.370 35.648 1.00 65.37 O
ATOM 17 N3 U B2433 -12.331 -68.396 34.777 1.00 64.68 N
ATOM 18 C4 U B2433 -11.676 -67.189 34.847 1.00 64.06 C
ATOM 19 O4 U B2433 -11.672 -66.450 33.863 1.00 64.05 O
ATOM 20 C5 U B2433 -11.033 -66.935 36.091 1.00 63.50 C
ATOM 21 C6 U B2433 -11.106 -67.829 37.070 1.00 63.60 C
ATOM 22 P C B2434 -7.561 -71.815 37.948 1.00 62.55 P
ATOM 23 OP1 C B2434 -6.718 -72.855 38.595 1.00 62.62 O
ATOM 24 OP2 C B2434 -6.910 -70.613 37.415 1.00 62.07 O
ATOM 25 O5' C B2434 -8.451 -72.471 36.817 1.00 63.28 O
TER
ATOM 2 P C A2434 -7.561 -71.815 37.948 1.00 62.55 P
ATOM 3 OP1 C A2434 -6.718 -72.855 38.595 1.00 62.62 O
ATOM 4 OP2 C A2434 -6.910 -70.613 37.415 1.00 62.07 O
ATOM 5 O5' C A2434 -8.451 -72.471 36.817 1.00 63.28 O
ATOM 6 C5' C A2434 -8.884 -73.809 36.923 1.00 63.89 C
ATOM 7 C4' C A2434 -9.241 -74.360 35.575 1.00 64.52 C
ATOM 8 O4' C A2434 -10.340 -73.594 35.002 1.00 64.62 O
ATOM 9 C3' C A2434 -8.155 -74.272 34.526 1.00 64.50 C
ATOM 10 O3' C A2434 -7.188 -75.305 34.650 1.00 64.67 O
ATOM 11 C2' C A2434 -8.952 -74.331 33.232 1.00 65.04 C
ATOM 12 O2' C A2434 -9.335 -75.661 32.974 1.00 65.75 O
ATOM 13 C1' C A2434 -10.203 -73.525 33.603 1.00 64.92 C
ATOM 14 N1 C A2434 -10.067 -72.111 33.229 1.00 64.43 N
ATOM 15 C2 C A2434 -10.060 -71.750 31.885 1.00 64.65 C
ATOM 16 O2 C A2434 -10.199 -72.606 31.027 1.00 65.25 O
ATOM 17 N3 C A2434 -9.892 -70.470 31.501 1.00 64.22 N
ATOM 18 C4 C A2434 -9.726 -69.543 32.424 1.00 63.58 C
ATOM 19 N4 C A2434 -9.554 -68.308 31.963 1.00 63.21 N
ATOM 20 C5 C A2434 -9.730 -69.861 33.826 1.00 63.33 C
ATOM 21 C6 C A2434 -9.896 -71.146 34.187 1.00 63.76 C
ATOM 22 P U A2435 -5.730 -75.142 33.989 1.00 60.21 P
ATOM 23 OP1 U A2435 -4.997 -76.386 34.271 1.00 60.50 O
ATOM 24 OP2 U A2435 -5.177 -73.861 34.465 1.00 59.45 O
ATOM 25 O5' U A2435 -6.024 -75.039 32.427 1.00 60.65 O
TER
ATOM 1 O3' A B2432 -10.891 -66.047 39.811 1.00 78.89 O
ATOM 2 P U B2433 -9.291 -66.212 39.882 1.00 61.94 P
ATOM 3 OP1 U B2433 -8.876 -65.733 41.224 1.00 61.39 O
ATOM 4 OP2 U B2433 -8.719 -65.549 38.664 1.00 61.85 O
ATOM 5 O5' U B2433 -9.083 -67.789 39.759 1.00 62.48 O
ATOM 6 C5' U B2433 -9.767 -68.690 40.615 1.00 62.78 C
ATOM 7 C4' U B2433 -10.426 -69.808 39.845 1.00 63.52 C
ATOM 8 O4' U B2433 -11.649 -69.320 39.234 1.00 63.78 O
ATOM 9 C3' U B2433 -9.651 -70.388 38.670 1.00 63.82 C
ATOM 10 O3' U B2433 -8.642 -71.316 39.042 1.00 63.85 O
ATOM 11 C2' U B2433 -10.769 -71.013 37.854 1.00 64.52 C
ATOM 12 O2' U B2433 -11.209 -72.220 38.462 1.00 64.95 O
ATOM 13 C1' U B2433 -11.862 -69.971 38.011 1.00 64.35 C
ATOM 14 N1 U B2433 -11.794 -68.985 36.953 1.00 64.22 N
ATOM 15 C2 U B2433 -12.422 -69.321 35.783 1.00 64.79 C
ATOM 16 O2 U B2433 -13.035 -70.370 35.648 1.00 65.37 O
ATOM 17 N3 U B2433 -12.331 -68.396 34.777 1.00 64.68 N
ATOM 18 C4 U B2433 -11.676 -67.189 34.847 1.00 64.06 C
ATOM 19 O4 U B2433 -11.672 -66.450 33.863 1.00 64.05 O
ATOM 20 C5 U B2433 -11.033 -66.935 36.091 1.00 63.50 C
ATOM 21 C6 U B2433 -11.106 -67.829 37.070 1.00 63.60 C
ATOM 22 P C B2434 -7.561 -71.815 37.948 1.00 62.55 P
ATOM 23 OP1 C B2434 -6.718 -72.855 38.595 1.00 62.62 O
ATOM 24 OP2 C B2434 -6.910 -70.613 37.415 1.00 62.07 O
ATOM 25 O5' C B2434 -8.451 -72.471 36.817 1.00 63.28 O
TER
Atoms:
C2: (-10.060,-71.750,31.885)
OP1: (-6.718,-72.855,38.595)
OP2: (-6.910,-70.613,37.415)
C4: (-9.726,-69.543,32.424)
O5': (-8.451,-72.471,36.817)
C3': (-8.155,-74.272,34.526)
C1': (-10.203,-73.525,33.603)
O4': (-10.340,-73.594,35.002)
C5': (-8.884,-73.809,36.923)
P: (-7.561,-71.815,37.948)
O2: (-10.199,-72.606,31.027)
C4': (-9.241,-74.360,35.575)
C2': (-8.952,-74.331,33.232)
O2': (-9.335,-75.661,32.974)
N1: (-10.067,-72.111,33.229)
N3: (-9.892,-70.470,31.501)
N4: (-9.554,-68.308,31.963)
C6: (-9.896,-71.146,34.187)
C5: (-9.730,-69.861,33.826)
O3': (-7.188,-75.305,34.650)
OP1: (-6.718,-72.855,38.595)
OP2: (-6.910,-70.613,37.415)
C4: (-9.726,-69.543,32.424)
O5': (-8.451,-72.471,36.817)
C3': (-8.155,-74.272,34.526)
C1': (-10.203,-73.525,33.603)
O4': (-10.340,-73.594,35.002)
C5': (-8.884,-73.809,36.923)
P: (-7.561,-71.815,37.948)
O2: (-10.199,-72.606,31.027)
C4': (-9.241,-74.360,35.575)
C2': (-8.952,-74.331,33.232)
O2': (-9.335,-75.661,32.974)
N1: (-10.067,-72.111,33.229)
N3: (-9.892,-70.470,31.501)
N4: (-9.554,-68.308,31.963)
C6: (-9.896,-71.146,34.187)
C5: (-9.730,-69.861,33.826)
O3': (-7.188,-75.305,34.650)
C4: (-11.676,-67.189,34.847)
N3: (-12.331,-68.396,34.777)
OP1: (-8.876,-65.733,41.224)
OP2: (-8.719,-65.549,38.664)
C2: (-12.422,-69.321,35.783)
C1': (-11.862,-69.971,38.011)
C3': (-9.651,-70.388,38.670)
O5': (-9.083,-67.789,39.759)
O4': (-11.649,-69.320,39.234)
C5': (-9.767,-68.690,40.615)
P: (-9.291,-66.212,39.882)
C4': (-10.426,-69.808,39.845)
C2': (-10.769,-71.013,37.854)
O2': (-11.209,-72.220,38.462)
N1: (-11.794,-68.985,36.953)
O4: (-11.672,-66.450,33.863)
O2: (-13.035,-70.370,35.648)
C6: (-11.106,-67.829,37.070)
C5: (-11.033,-66.935,36.091)
O3': (-8.642,-71.316,39.042)
N3: (-12.331,-68.396,34.777)
OP1: (-8.876,-65.733,41.224)
OP2: (-8.719,-65.549,38.664)
C2: (-12.422,-69.321,35.783)
C1': (-11.862,-69.971,38.011)
C3': (-9.651,-70.388,38.670)
O5': (-9.083,-67.789,39.759)
O4': (-11.649,-69.320,39.234)
C5': (-9.767,-68.690,40.615)
P: (-9.291,-66.212,39.882)
C4': (-10.426,-69.808,39.845)
C2': (-10.769,-71.013,37.854)
O2': (-11.209,-72.220,38.462)
N1: (-11.794,-68.985,36.953)
O4: (-11.672,-66.450,33.863)
O2: (-13.035,-70.370,35.648)
C6: (-11.106,-67.829,37.070)
C5: (-11.033,-66.935,36.091)
O3': (-8.642,-71.316,39.042)
Image (generated by PyMOL):