Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01819:01818
Extra
PDB:
ATOM 1 O3' U A1818 106.571 121.642 64.150 1.00 38.79 O
ATOM 2 P C A1819 105.503 120.852 63.250 1.00 39.32 P
ATOM 3 OP1 C A1819 104.716 120.006 64.182 1.00 38.65 O
ATOM 4 OP2 C A1819 106.219 120.219 62.118 1.00 39.90 O
ATOM 5 O5' C A1819 104.583 122.013 62.656 1.00 37.48 O
ATOM 6 C5' C A1819 103.858 122.891 63.537 1.00 35.25 C
ATOM 7 C4' C A1819 103.363 124.116 62.802 1.00 33.44 C
ATOM 8 O4' C A1819 104.484 124.851 62.243 1.00 33.46 O
ATOM 9 C3' C A1819 102.475 123.912 61.588 1.00 34.38 C
ATOM 10 O3' C A1819 101.131 123.564 61.918 1.00 35.45 O
ATOM 11 C2' C A1819 102.542 125.290 60.946 1.00 34.39 C
ATOM 12 O2' C A1819 101.706 126.236 61.590 1.00 34.81 O
ATOM 13 C1' C A1819 104.020 125.643 61.158 1.00 33.42 C
ATOM 14 N1 C A1819 104.786 125.328 59.938 1.00 32.12 N
ATOM 15 C2 C A1819 104.698 126.217 58.851 1.00 31.76 C
ATOM 16 O2 C A1819 104.090 127.286 58.997 1.00 29.10 O
ATOM 17 N3 C A1819 105.277 125.886 57.677 1.00 30.67 N
ATOM 18 C4 C A1819 105.937 124.734 57.564 1.00 30.89 C
ATOM 19 N4 C A1819 106.436 124.424 56.369 1.00 31.65 N
ATOM 20 C5 C A1819 106.102 123.843 58.668 1.00 29.71 C
ATOM 21 C6 C A1819 105.522 124.179 59.828 1.00 31.58 C
ATOM 22 P C A1820 100.198 122.842 60.819 1.00 34.01 P
ATOM 23 OP1 C A1820 99.019 122.371 61.557 1.00 36.25 O
ATOM 24 OP2 C A1820 100.986 121.884 60.017 1.00 36.02 O
ATOM 25 O5' C A1820 99.762 124.009 59.836 1.00 31.88 O
TER
ATOM 1 O3' A B1817 112.200 119.942 62.630 1.00 38.33 O
ATOM 2 P U B1818 110.690 119.498 62.307 1.00 40.62 P
ATOM 3 OP1 U B1818 110.395 118.382 63.241 1.00 38.11 O
ATOM 4 OP2 U B1818 110.561 119.297 60.833 1.00 35.59 O
ATOM 5 O5' U B1818 109.820 120.765 62.726 1.00 36.71 O
ATOM 6 C5' U B1818 109.737 121.157 64.104 1.00 36.22 C
ATOM 7 C4' U B1818 108.897 122.400 64.256 1.00 37.63 C
ATOM 8 O4' U B1818 109.590 123.559 63.722 1.00 37.88 O
ATOM 9 C3' U B1818 107.573 122.425 63.515 1.00 38.23 C
ATOM 10 O3' U B1818 106.571 121.642 64.150 1.00 38.79 O
ATOM 11 C2' U B1818 107.250 123.909 63.540 1.00 37.40 C
ATOM 12 O2' U B1818 106.789 124.322 64.810 1.00 36.73 O
ATOM 13 C1' U B1818 108.633 124.515 63.283 1.00 36.76 C
ATOM 14 N1 U B1818 108.848 124.800 61.855 1.00 34.57 N
ATOM 15 C2 U B1818 108.429 126.033 61.375 1.00 34.59 C
ATOM 16 O2 U B1818 107.961 126.901 62.092 1.00 35.40 O
ATOM 17 N3 U B1818 108.589 126.216 60.025 1.00 33.86 N
ATOM 18 C4 U B1818 109.135 125.323 59.126 1.00 35.65 C
ATOM 19 O4 U B1818 109.196 125.624 57.931 1.00 35.87 O
ATOM 20 C5 U B1818 109.576 124.089 59.705 1.00 35.05 C
ATOM 21 C6 U B1818 109.420 123.875 61.015 1.00 34.21 C
ATOM 22 P C B1819 105.503 120.852 63.250 1.00 39.32 P
ATOM 23 OP1 C B1819 104.716 120.006 64.182 1.00 38.65 O
ATOM 24 OP2 C B1819 106.219 120.219 62.118 1.00 39.90 O
ATOM 25 O5' C B1819 104.583 122.013 62.656 1.00 37.48 O
TER
ATOM 2 P C A1819 105.503 120.852 63.250 1.00 39.32 P
ATOM 3 OP1 C A1819 104.716 120.006 64.182 1.00 38.65 O
ATOM 4 OP2 C A1819 106.219 120.219 62.118 1.00 39.90 O
ATOM 5 O5' C A1819 104.583 122.013 62.656 1.00 37.48 O
ATOM 6 C5' C A1819 103.858 122.891 63.537 1.00 35.25 C
ATOM 7 C4' C A1819 103.363 124.116 62.802 1.00 33.44 C
ATOM 8 O4' C A1819 104.484 124.851 62.243 1.00 33.46 O
ATOM 9 C3' C A1819 102.475 123.912 61.588 1.00 34.38 C
ATOM 10 O3' C A1819 101.131 123.564 61.918 1.00 35.45 O
ATOM 11 C2' C A1819 102.542 125.290 60.946 1.00 34.39 C
ATOM 12 O2' C A1819 101.706 126.236 61.590 1.00 34.81 O
ATOM 13 C1' C A1819 104.020 125.643 61.158 1.00 33.42 C
ATOM 14 N1 C A1819 104.786 125.328 59.938 1.00 32.12 N
ATOM 15 C2 C A1819 104.698 126.217 58.851 1.00 31.76 C
ATOM 16 O2 C A1819 104.090 127.286 58.997 1.00 29.10 O
ATOM 17 N3 C A1819 105.277 125.886 57.677 1.00 30.67 N
ATOM 18 C4 C A1819 105.937 124.734 57.564 1.00 30.89 C
ATOM 19 N4 C A1819 106.436 124.424 56.369 1.00 31.65 N
ATOM 20 C5 C A1819 106.102 123.843 58.668 1.00 29.71 C
ATOM 21 C6 C A1819 105.522 124.179 59.828 1.00 31.58 C
ATOM 22 P C A1820 100.198 122.842 60.819 1.00 34.01 P
ATOM 23 OP1 C A1820 99.019 122.371 61.557 1.00 36.25 O
ATOM 24 OP2 C A1820 100.986 121.884 60.017 1.00 36.02 O
ATOM 25 O5' C A1820 99.762 124.009 59.836 1.00 31.88 O
TER
ATOM 1 O3' A B1817 112.200 119.942 62.630 1.00 38.33 O
ATOM 2 P U B1818 110.690 119.498 62.307 1.00 40.62 P
ATOM 3 OP1 U B1818 110.395 118.382 63.241 1.00 38.11 O
ATOM 4 OP2 U B1818 110.561 119.297 60.833 1.00 35.59 O
ATOM 5 O5' U B1818 109.820 120.765 62.726 1.00 36.71 O
ATOM 6 C5' U B1818 109.737 121.157 64.104 1.00 36.22 C
ATOM 7 C4' U B1818 108.897 122.400 64.256 1.00 37.63 C
ATOM 8 O4' U B1818 109.590 123.559 63.722 1.00 37.88 O
ATOM 9 C3' U B1818 107.573 122.425 63.515 1.00 38.23 C
ATOM 10 O3' U B1818 106.571 121.642 64.150 1.00 38.79 O
ATOM 11 C2' U B1818 107.250 123.909 63.540 1.00 37.40 C
ATOM 12 O2' U B1818 106.789 124.322 64.810 1.00 36.73 O
ATOM 13 C1' U B1818 108.633 124.515 63.283 1.00 36.76 C
ATOM 14 N1 U B1818 108.848 124.800 61.855 1.00 34.57 N
ATOM 15 C2 U B1818 108.429 126.033 61.375 1.00 34.59 C
ATOM 16 O2 U B1818 107.961 126.901 62.092 1.00 35.40 O
ATOM 17 N3 U B1818 108.589 126.216 60.025 1.00 33.86 N
ATOM 18 C4 U B1818 109.135 125.323 59.126 1.00 35.65 C
ATOM 19 O4 U B1818 109.196 125.624 57.931 1.00 35.87 O
ATOM 20 C5 U B1818 109.576 124.089 59.705 1.00 35.05 C
ATOM 21 C6 U B1818 109.420 123.875 61.015 1.00 34.21 C
ATOM 22 P C B1819 105.503 120.852 63.250 1.00 39.32 P
ATOM 23 OP1 C B1819 104.716 120.006 64.182 1.00 38.65 O
ATOM 24 OP2 C B1819 106.219 120.219 62.118 1.00 39.90 O
ATOM 25 O5' C B1819 104.583 122.013 62.656 1.00 37.48 O
TER
Atoms:
C2: (104.698,126.217,58.851)
OP1: (104.716,120.006,64.182)
OP2: (106.219,120.219,62.118)
C4: (105.937,124.734,57.564)
O5': (104.583,122.013,62.656)
C3': (102.475,123.912,61.588)
C1': (104.020,125.643,61.158)
O4': (104.484,124.851,62.243)
C5': (103.858,122.891,63.537)
P: (105.503,120.852,63.250)
O2: (104.090,127.286,58.997)
C4': (103.363,124.116,62.802)
C2': (102.542,125.290,60.946)
O2': (101.706,126.236,61.590)
N1: (104.786,125.328,59.938)
N3: (105.277,125.886,57.677)
N4: (106.436,124.424,56.369)
C6: (105.522,124.179,59.828)
C5: (106.102,123.843,58.668)
O3': (101.131,123.564,61.918)
OP1: (104.716,120.006,64.182)
OP2: (106.219,120.219,62.118)
C4: (105.937,124.734,57.564)
O5': (104.583,122.013,62.656)
C3': (102.475,123.912,61.588)
C1': (104.020,125.643,61.158)
O4': (104.484,124.851,62.243)
C5': (103.858,122.891,63.537)
P: (105.503,120.852,63.250)
O2: (104.090,127.286,58.997)
C4': (103.363,124.116,62.802)
C2': (102.542,125.290,60.946)
O2': (101.706,126.236,61.590)
N1: (104.786,125.328,59.938)
N3: (105.277,125.886,57.677)
N4: (106.436,124.424,56.369)
C6: (105.522,124.179,59.828)
C5: (106.102,123.843,58.668)
O3': (101.131,123.564,61.918)
C4: (109.135,125.323,59.126)
N3: (108.589,126.216,60.025)
OP1: (110.395,118.382,63.241)
OP2: (110.561,119.297,60.833)
C2: (108.429,126.033,61.375)
C1': (108.633,124.515,63.283)
C3': (107.573,122.425,63.515)
O5': (109.820,120.765,62.726)
O4': (109.590,123.559,63.722)
C5': (109.737,121.157,64.104)
P: (110.690,119.498,62.307)
C4': (108.897,122.400,64.256)
C2': (107.250,123.909,63.540)
O2': (106.789,124.322,64.810)
N1: (108.848,124.800,61.855)
O4: (109.196,125.624,57.931)
O2: (107.961,126.901,62.092)
C6: (109.420,123.875,61.015)
C5: (109.576,124.089,59.705)
O3': (106.571,121.642,64.150)
N3: (108.589,126.216,60.025)
OP1: (110.395,118.382,63.241)
OP2: (110.561,119.297,60.833)
C2: (108.429,126.033,61.375)
C1': (108.633,124.515,63.283)
C3': (107.573,122.425,63.515)
O5': (109.820,120.765,62.726)
O4': (109.590,123.559,63.722)
C5': (109.737,121.157,64.104)
P: (110.690,119.498,62.307)
C4': (108.897,122.400,64.256)
C2': (107.250,123.909,63.540)
O2': (106.789,124.322,64.810)
N1: (108.848,124.800,61.855)
O4: (109.196,125.624,57.931)
O2: (107.961,126.901,62.092)
C6: (109.420,123.875,61.015)
C5: (109.576,124.089,59.705)
O3': (106.571,121.642,64.150)
Image (generated by PyMOL):