Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ4:0553:01223
Extra
PDB:
ATOM 1 O3' G A 552 -5.471 95.017 97.062 1.00 57.12 O
ATOM 2 P A A 553 -5.079 94.024 98.268 1.00 57.79 P
ATOM 3 OP1 A A 553 -5.727 92.715 97.997 1.00 54.54 O
ATOM 4 OP2 A A 553 -5.279 94.693 99.586 1.00 55.96 O
ATOM 5 O5' A A 553 -3.521 93.798 98.049 1.00 56.64 O
ATOM 6 C5' A A 553 -3.047 93.190 96.838 1.00 54.68 C
ATOM 7 C4' A A 553 -1.562 93.387 96.691 1.00 53.81 C
ATOM 8 O4' A A 553 -1.245 94.762 96.365 1.00 53.17 O
ATOM 9 C3' A A 553 -0.735 93.139 97.934 1.00 52.71 C
ATOM 10 O3' A A 553 -0.582 91.756 98.176 1.00 50.97 O
ATOM 11 C2' A A 553 0.575 93.810 97.558 1.00 51.51 C
ATOM 12 O2' A A 553 1.287 93.014 96.634 1.00 48.91 O
ATOM 13 C1' A A 553 0.065 95.057 96.832 1.00 51.98 C
ATOM 14 N9 A A 553 0.008 96.271 97.649 1.00 51.82 N
ATOM 15 C8 A A 553 -1.101 96.849 98.212 1.00 53.34 C
ATOM 16 N7 A A 553 -0.852 97.979 98.832 1.00 53.25 N
ATOM 17 C5 A A 553 0.514 98.150 98.681 1.00 51.12 C
ATOM 18 C6 A A 553 1.391 99.169 99.099 1.00 51.55 C
ATOM 19 N6 A A 553 1.002 100.251 99.776 1.00 51.33 N
ATOM 20 N1 A A 553 2.697 99.037 98.793 1.00 49.64 N
ATOM 21 C2 A A 553 3.085 97.953 98.109 1.00 51.15 C
ATOM 22 N3 A A 553 2.358 96.934 97.653 1.00 50.67 N
ATOM 23 C4 A A 553 1.063 97.095 97.974 1.00 51.70 C
ATOM 24 P A A 554 -0.690 91.204 99.677 1.00 50.97 P
ATOM 25 OP1 A A 554 -0.842 89.717 99.570 1.00 48.44 O
ATOM 26 OP2 A A 554 -1.702 92.004 100.413 1.00 49.89 O
ATOM 27 O5' A A 554 0.730 91.539 100.320 1.00 52.23 O
TER
ATOM 1 O3' C B1222 7.893 89.372 98.013 1.00 44.73 O
ATOM 2 P U B1223 7.588 89.506 96.445 1.00 46.38 P
ATOM 3 OP1 U B1223 6.777 88.327 96.041 1.00 46.27 O
ATOM 4 OP2 U B1223 8.874 89.763 95.763 1.00 44.81 O
ATOM 5 O5' U B1223 6.706 90.832 96.363 1.00 43.22 O
ATOM 6 C5' U B1223 5.416 90.884 97.006 1.00 43.05 C
ATOM 7 C4' U B1223 4.836 92.281 96.954 1.00 42.67 C
ATOM 8 O4' U B1223 5.580 93.182 97.811 1.00 43.04 O
ATOM 9 C3' U B1223 4.848 92.985 95.615 1.00 42.09 C
ATOM 10 O3' U B1223 3.823 92.538 94.757 1.00 43.55 O
ATOM 11 C2' U B1223 4.646 94.431 96.028 1.00 42.56 C
ATOM 12 O2' U B1223 3.312 94.717 96.369 1.00 43.07 O
ATOM 13 C1' U B1223 5.516 94.499 97.280 1.00 42.58 C
ATOM 14 N1 U B1223 6.877 94.941 96.936 1.00 45.09 N
ATOM 15 C2 U B1223 7.108 96.306 96.861 1.00 45.96 C
ATOM 16 O2 U B1223 6.251 97.139 97.104 1.00 45.12 O
ATOM 17 N3 U B1223 8.382 96.657 96.488 1.00 46.04 N
ATOM 18 C4 U B1223 9.423 95.805 96.194 1.00 44.61 C
ATOM 19 O4 U B1223 10.504 96.277 95.855 1.00 46.76 O
ATOM 20 C5 U B1223 9.117 94.414 96.317 1.00 42.43 C
ATOM 21 C6 U B1223 7.890 94.038 96.675 1.00 43.87 C
ATOM 22 P G B1224 3.899 92.876 93.189 1.00 45.55 P
ATOM 23 OP1 G B1224 2.965 91.928 92.521 1.00 43.24 O
ATOM 24 OP2 G B1224 5.326 92.921 92.769 1.00 43.48 O
ATOM 25 O5' G B1224 3.313 94.353 93.095 1.00 43.26 O
TER
ATOM 2 P A A 553 -5.079 94.024 98.268 1.00 57.79 P
ATOM 3 OP1 A A 553 -5.727 92.715 97.997 1.00 54.54 O
ATOM 4 OP2 A A 553 -5.279 94.693 99.586 1.00 55.96 O
ATOM 5 O5' A A 553 -3.521 93.798 98.049 1.00 56.64 O
ATOM 6 C5' A A 553 -3.047 93.190 96.838 1.00 54.68 C
ATOM 7 C4' A A 553 -1.562 93.387 96.691 1.00 53.81 C
ATOM 8 O4' A A 553 -1.245 94.762 96.365 1.00 53.17 O
ATOM 9 C3' A A 553 -0.735 93.139 97.934 1.00 52.71 C
ATOM 10 O3' A A 553 -0.582 91.756 98.176 1.00 50.97 O
ATOM 11 C2' A A 553 0.575 93.810 97.558 1.00 51.51 C
ATOM 12 O2' A A 553 1.287 93.014 96.634 1.00 48.91 O
ATOM 13 C1' A A 553 0.065 95.057 96.832 1.00 51.98 C
ATOM 14 N9 A A 553 0.008 96.271 97.649 1.00 51.82 N
ATOM 15 C8 A A 553 -1.101 96.849 98.212 1.00 53.34 C
ATOM 16 N7 A A 553 -0.852 97.979 98.832 1.00 53.25 N
ATOM 17 C5 A A 553 0.514 98.150 98.681 1.00 51.12 C
ATOM 18 C6 A A 553 1.391 99.169 99.099 1.00 51.55 C
ATOM 19 N6 A A 553 1.002 100.251 99.776 1.00 51.33 N
ATOM 20 N1 A A 553 2.697 99.037 98.793 1.00 49.64 N
ATOM 21 C2 A A 553 3.085 97.953 98.109 1.00 51.15 C
ATOM 22 N3 A A 553 2.358 96.934 97.653 1.00 50.67 N
ATOM 23 C4 A A 553 1.063 97.095 97.974 1.00 51.70 C
ATOM 24 P A A 554 -0.690 91.204 99.677 1.00 50.97 P
ATOM 25 OP1 A A 554 -0.842 89.717 99.570 1.00 48.44 O
ATOM 26 OP2 A A 554 -1.702 92.004 100.413 1.00 49.89 O
ATOM 27 O5' A A 554 0.730 91.539 100.320 1.00 52.23 O
TER
ATOM 1 O3' C B1222 7.893 89.372 98.013 1.00 44.73 O
ATOM 2 P U B1223 7.588 89.506 96.445 1.00 46.38 P
ATOM 3 OP1 U B1223 6.777 88.327 96.041 1.00 46.27 O
ATOM 4 OP2 U B1223 8.874 89.763 95.763 1.00 44.81 O
ATOM 5 O5' U B1223 6.706 90.832 96.363 1.00 43.22 O
ATOM 6 C5' U B1223 5.416 90.884 97.006 1.00 43.05 C
ATOM 7 C4' U B1223 4.836 92.281 96.954 1.00 42.67 C
ATOM 8 O4' U B1223 5.580 93.182 97.811 1.00 43.04 O
ATOM 9 C3' U B1223 4.848 92.985 95.615 1.00 42.09 C
ATOM 10 O3' U B1223 3.823 92.538 94.757 1.00 43.55 O
ATOM 11 C2' U B1223 4.646 94.431 96.028 1.00 42.56 C
ATOM 12 O2' U B1223 3.312 94.717 96.369 1.00 43.07 O
ATOM 13 C1' U B1223 5.516 94.499 97.280 1.00 42.58 C
ATOM 14 N1 U B1223 6.877 94.941 96.936 1.00 45.09 N
ATOM 15 C2 U B1223 7.108 96.306 96.861 1.00 45.96 C
ATOM 16 O2 U B1223 6.251 97.139 97.104 1.00 45.12 O
ATOM 17 N3 U B1223 8.382 96.657 96.488 1.00 46.04 N
ATOM 18 C4 U B1223 9.423 95.805 96.194 1.00 44.61 C
ATOM 19 O4 U B1223 10.504 96.277 95.855 1.00 46.76 O
ATOM 20 C5 U B1223 9.117 94.414 96.317 1.00 42.43 C
ATOM 21 C6 U B1223 7.890 94.038 96.675 1.00 43.87 C
ATOM 22 P G B1224 3.899 92.876 93.189 1.00 45.55 P
ATOM 23 OP1 G B1224 2.965 91.928 92.521 1.00 43.24 O
ATOM 24 OP2 G B1224 5.326 92.921 92.769 1.00 43.48 O
ATOM 25 O5' G B1224 3.313 94.353 93.095 1.00 43.26 O
TER
Atoms:
OP1: (-5.727,92.715,97.997)
OP2: (-5.279,94.693,99.586)
C3': (-0.735,93.139,97.934)
C1': (0.065,95.057,96.832)
C5': (-3.047,93.190,96.838)
O4': (-1.245,94.762,96.365)
C8: (-1.101,96.849,98.212)
O2': (1.287,93.014,96.634)
C6: (1.391,99.169,99.099)
C5: (0.514,98.150,98.681)
C4: (1.063,97.095,97.974)
P: (-5.079,94.024,98.268)
C4': (-1.562,93.387,96.691)
C2': (0.575,93.810,97.558)
C2: (3.085,97.953,98.109)
N1: (2.697,99.037,98.793)
N3: (2.358,96.934,97.653)
N6: (1.002,100.251,99.776)
N7: (-0.852,97.979,98.832)
N9: (0.008,96.271,97.649)
O5': (-3.521,93.798,98.049)
O3': (-0.582,91.756,98.176)
OP2: (-5.279,94.693,99.586)
C3': (-0.735,93.139,97.934)
C1': (0.065,95.057,96.832)
C5': (-3.047,93.190,96.838)
O4': (-1.245,94.762,96.365)
C8: (-1.101,96.849,98.212)
O2': (1.287,93.014,96.634)
C6: (1.391,99.169,99.099)
C5: (0.514,98.150,98.681)
C4: (1.063,97.095,97.974)
P: (-5.079,94.024,98.268)
C4': (-1.562,93.387,96.691)
C2': (0.575,93.810,97.558)
C2: (3.085,97.953,98.109)
N1: (2.697,99.037,98.793)
N3: (2.358,96.934,97.653)
N6: (1.002,100.251,99.776)
N7: (-0.852,97.979,98.832)
N9: (0.008,96.271,97.649)
O5': (-3.521,93.798,98.049)
O3': (-0.582,91.756,98.176)
C4: (9.423,95.805,96.194)
N3: (8.382,96.657,96.488)
OP1: (6.777,88.327,96.041)
OP2: (8.874,89.763,95.763)
C2: (7.108,96.306,96.861)
C1': (5.516,94.499,97.280)
C3': (4.848,92.985,95.615)
O5': (6.706,90.832,96.363)
O4': (5.580,93.182,97.811)
C5': (5.416,90.884,97.006)
P: (7.588,89.506,96.445)
C4': (4.836,92.281,96.954)
C2': (4.646,94.431,96.028)
O2': (3.312,94.717,96.369)
N1: (6.877,94.941,96.936)
O4: (10.504,96.277,95.855)
O2: (6.251,97.139,97.104)
C6: (7.890,94.038,96.675)
C5: (9.117,94.414,96.317)
O3': (3.823,92.538,94.757)
N3: (8.382,96.657,96.488)
OP1: (6.777,88.327,96.041)
OP2: (8.874,89.763,95.763)
C2: (7.108,96.306,96.861)
C1': (5.516,94.499,97.280)
C3': (4.848,92.985,95.615)
O5': (6.706,90.832,96.363)
O4': (5.580,93.182,97.811)
C5': (5.416,90.884,97.006)
P: (7.588,89.506,96.445)
C4': (4.836,92.281,96.954)
C2': (4.646,94.431,96.028)
O2': (3.312,94.717,96.369)
N1: (6.877,94.941,96.936)
O4: (10.504,96.277,95.855)
O2: (6.251,97.139,97.104)
C6: (7.890,94.038,96.675)
C5: (9.117,94.414,96.317)
O3': (3.823,92.538,94.757)
Image (generated by PyMOL):