ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3Q0Q:B6:B7

Extra

PDB:
ATOM 1 O3' A A 5 -5.232 1.538 -13.093 1.00 36.43 O
ATOM 2 P U A 6 -6.778 1.152 -13.173 1.00 40.46 P
ATOM 3 OP1 U A 6 -7.345 1.759 -14.396 1.00 42.94 O
ATOM 4 OP2 U A 6 -7.449 1.304 -11.862 1.00 39.67 O
ATOM 5 O5' U A 6 -6.680 -0.415 -13.483 1.00 29.00 O
ATOM 6 C5' U A 6 -7.837 -1.227 -13.357 1.00 26.54 C
ATOM 7 C4' U A 6 -7.825 -2.313 -14.399 1.00 34.10 C
ATOM 8 O4' U A 6 -6.998 -3.422 -13.963 1.00 34.02 O
ATOM 9 C3' U A 6 -9.170 -2.944 -14.721 1.00 37.87 C
ATOM 10 O3' U A 6 -9.888 -2.144 -15.646 1.00 39.65 O
ATOM 11 C2' U A 6 -8.782 -4.305 -15.287 1.00 36.69 C
ATOM 12 O2' U A 6 -8.494 -4.187 -16.672 1.00 33.68 O
ATOM 13 C1' U A 6 -7.466 -4.614 -14.558 1.00 32.68 C
ATOM 14 N1 U A 6 -7.439 -5.740 -13.581 1.00 29.93 N
ATOM 15 C2 U A 6 -7.108 -6.986 -14.070 1.00 30.15 C
ATOM 16 O2 U A 6 -6.856 -7.201 -15.245 1.00 32.13 O
ATOM 17 N3 U A 6 -7.075 -7.981 -13.133 1.00 24.14 N
ATOM 18 C4 U A 6 -7.319 -7.864 -11.780 1.00 30.07 C
ATOM 19 O4 U A 6 -7.240 -8.871 -11.080 1.00 33.42 O
ATOM 20 C5 U A 6 -7.647 -6.530 -11.334 1.00 27.36 C
ATOM 21 C6 U A 6 -7.695 -5.538 -12.239 1.00 31.31 C
ATOM 22 P A A 7 -11.480 -2.175 -15.712 1.00 41.49 P
ATOM 23 OP1 A A 7 -11.951 -1.152 -16.670 1.00 42.01 O
ATOM 24 OP2 A A 7 -12.061 -2.268 -14.357 1.00 37.14 O
ATOM 25 O5' A A 7 -11.703 -3.569 -16.456 1.00 43.69 O
TER

ATOM 1 O3' U B 6 -9.888 -2.144 -15.646 1.00 39.65 O
ATOM 2 P A B 7 -11.480 -2.175 -15.712 1.00 41.49 P
ATOM 3 OP1 A B 7 -11.951 -1.152 -16.670 1.00 42.01 O
ATOM 4 OP2 A B 7 -12.061 -2.268 -14.357 1.00 37.14 O
ATOM 5 O5' A B 7 -11.703 -3.569 -16.456 1.00 43.69 O
ATOM 6 C5' A B 7 -11.615 -3.747 -17.861 1.00 38.85 C
ATOM 7 C4' A B 7 -12.617 -4.798 -18.246 1.00 37.99 C
ATOM 8 O4' A B 7 -12.322 -6.009 -17.507 1.00 31.04 O
ATOM 9 C3' A B 7 -14.058 -4.425 -17.909 1.00 39.90 C
ATOM 10 O3' A B 7 -14.809 -4.186 -19.086 1.00 41.70 O
ATOM 11 C2' A B 7 -14.645 -5.576 -17.107 1.00 38.83 C
ATOM 12 O2' A B 7 -15.825 -6.064 -17.725 1.00 57.58 O
ATOM 13 C1' A B 7 -13.534 -6.630 -17.143 1.00 33.22 C
ATOM 14 N9 A B 7 -13.419 -7.439 -15.912 1.00 34.02 N
ATOM 15 C8 A B 7 -13.351 -7.040 -14.604 1.00 35.91 C
ATOM 16 N7 A B 7 -13.289 -8.047 -13.759 1.00 33.27 N
ATOM 17 C5 A B 7 -13.329 -9.173 -14.574 1.00 31.25 C
ATOM 18 C6 A B 7 -13.305 -10.553 -14.308 1.00 28.02 C
ATOM 19 N6 A B 7 -13.225 -11.049 -13.069 1.00 23.34 N
ATOM 20 N1 A B 7 -13.355 -11.406 -15.357 1.00 32.44 N
ATOM 21 C2 A B 7 -13.444 -10.921 -16.596 1.00 34.73 C
ATOM 22 N3 A B 7 -13.480 -9.643 -16.964 1.00 37.06 N
ATOM 23 C4 A B 7 -13.411 -8.818 -15.901 1.00 31.87 C
TER

Atoms:
C4: (-7.319,-7.864,-11.780)
N3: (-7.075,-7.981,-13.133)
OP1: (-7.345,1.759,-14.396)
OP2: (-7.449,1.304,-11.862)
C2: (-7.108,-6.986,-14.070)
C1': (-7.466,-4.614,-14.558)
C3': (-9.170,-2.944,-14.721)
O5': (-6.680,-0.415,-13.483)
O4': (-6.998,-3.422,-13.963)
C5': (-7.837,-1.227,-13.357)
P: (-6.778,1.152,-13.173)
C4': (-7.825,-2.313,-14.399)
C2': (-8.782,-4.305,-15.287)
O2': (-8.494,-4.187,-16.672)
N1: (-7.439,-5.740,-13.581)
O4: (-7.240,-8.871,-11.080)
O2: (-6.856,-7.201,-15.245)
C6: (-7.695,-5.538,-12.239)
C5: (-7.647,-6.530,-11.334)
O3': (-9.888,-2.144,-15.646)
OP1: (-11.951,-1.152,-16.670)
OP2: (-12.061,-2.268,-14.357)
C3': (-14.058,-4.425,-17.909)
C1': (-13.534,-6.630,-17.143)
C5': (-11.615,-3.747,-17.861)
O4': (-12.322,-6.009,-17.507)
C8: (-13.351,-7.040,-14.604)
O2': (-15.825,-6.064,-17.725)
C6: (-13.305,-10.553,-14.308)
C5: (-13.329,-9.173,-14.574)
C4: (-13.411,-8.818,-15.901)
P: (-11.480,-2.175,-15.712)
C4': (-12.617,-4.798,-18.246)
C2': (-14.645,-5.576,-17.107)
C2: (-13.444,-10.921,-16.596)
N1: (-13.355,-11.406,-15.357)
N3: (-13.480,-9.643,-16.964)
N6: (-13.225,-11.049,-13.069)
N7: (-13.289,-8.047,-13.759)
N9: (-13.419,-7.439,-15.912)
O5': (-11.703,-3.569,-16.456)
O3': (-14.809,-4.186,-19.086)
Image (generated by PyMOL):
PyMOL image
show in jmol