Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A478:A479
Extra
PDB:
ATOM 1 O3' U A 477 -23.955 4.793 106.113 1.00 51.38 O
ATOM 2 P U A 478 -24.621 6.089 105.443 1.00 36.22 P
ATOM 3 OP1 U A 478 -25.871 6.388 106.204 1.00 36.22 O
ATOM 4 OP2 U A 478 -24.713 5.838 103.977 1.00 36.22 O
ATOM 5 O5' U A 478 -23.528 7.195 105.727 1.00 36.22 O
ATOM 6 C5' U A 478 -22.987 7.354 107.022 1.00 36.22 C
ATOM 7 C4' U A 478 -22.510 8.752 107.212 1.00 36.22 C
ATOM 8 O4' U A 478 -21.107 8.823 106.882 1.00 36.22 O
ATOM 9 C3' U A 478 -23.172 9.775 106.310 1.00 36.22 C
ATOM 10 O3' U A 478 -24.381 10.263 106.853 1.00 36.22 O
ATOM 11 C2' U A 478 -22.097 10.831 106.137 1.00 36.22 C
ATOM 12 O2' U A 478 -22.048 11.695 107.256 1.00 36.22 O
ATOM 13 C1' U A 478 -20.839 9.979 106.141 1.00 36.22 C
ATOM 14 N1 U A 478 -20.477 9.561 104.821 1.00 35.94 N
ATOM 15 C2 U A 478 -19.481 10.281 104.246 1.00 35.94 C
ATOM 16 O2 U A 478 -18.984 11.208 104.835 1.00 35.94 O
ATOM 17 N3 U A 478 -19.144 9.857 102.996 1.00 35.94 N
ATOM 18 C4 U A 478 -19.719 8.786 102.342 1.00 35.94 C
ATOM 19 O4 U A 478 -19.305 8.526 101.220 1.00 35.94 O
ATOM 20 C5 U A 478 -20.757 8.070 103.036 1.00 35.94 C
ATOM 21 C6 U A 478 -21.093 8.480 104.252 1.00 35.94 C
ATOM 22 P G A 479 -25.351 11.176 105.967 1.00 20.28 P
ATOM 23 OP1 G A 479 -26.770 10.822 106.336 1.00 20.28 O
ATOM 24 OP2 G A 479 -24.912 11.018 104.549 1.00 20.28 O
ATOM 25 O5' G A 479 -25.011 12.649 106.491 1.00 20.28 O
TER
ATOM 1 O3' U B 478 -24.381 10.263 106.853 1.00 36.22 O
ATOM 2 P G B 479 -25.351 11.176 105.967 1.00 20.28 P
ATOM 3 OP1 G B 479 -26.770 10.822 106.336 1.00 20.28 O
ATOM 4 OP2 G B 479 -24.912 11.018 104.549 1.00 20.28 O
ATOM 5 O5' G B 479 -25.011 12.649 106.491 1.00 20.28 O
ATOM 6 C5' G B 479 -24.360 13.599 105.656 1.00 20.28 C
ATOM 7 C4' G B 479 -25.258 14.753 105.325 1.00 20.28 C
ATOM 8 O4' G B 479 -24.849 15.300 104.055 1.00 20.28 O
ATOM 9 C3' G B 479 -26.732 14.401 105.188 1.00 20.28 C
ATOM 10 O3' G B 479 -27.527 15.474 105.667 1.00 20.28 O
ATOM 11 C2' G B 479 -26.932 14.253 103.689 1.00 20.28 C
ATOM 12 O2' G B 479 -28.241 14.551 103.252 1.00 20.28 O
ATOM 13 C1' G B 479 -25.912 15.238 103.123 1.00 20.28 C
ATOM 14 N9 G B 479 -25.339 14.824 101.850 1.00 20.29 N
ATOM 15 C8 G B 479 -25.610 13.710 101.103 1.00 20.29 C
ATOM 16 N7 G B 479 -24.866 13.630 100.028 1.00 20.29 N
ATOM 17 C5 G B 479 -24.048 14.753 100.071 1.00 20.29 C
ATOM 18 C6 G B 479 -23.029 15.225 99.193 1.00 20.29 C
ATOM 19 O6 G B 479 -22.600 14.749 98.140 1.00 20.29 O
ATOM 20 N1 G B 479 -22.454 16.401 99.646 1.00 20.29 N
ATOM 21 C2 G B 479 -22.808 17.056 100.800 1.00 20.29 C
ATOM 22 N2 G B 479 -22.147 18.183 101.083 1.00 20.29 N
ATOM 23 N3 G B 479 -23.747 16.632 101.626 1.00 20.29 N
ATOM 24 C4 G B 479 -24.327 15.487 101.204 1.00 20.29 C
ATOM 25 P A B 480 -28.836 15.170 106.547 1.00 32.03 P
ATOM 26 OP1 A B 480 -28.471 14.071 107.493 1.00 32.03 O
ATOM 27 OP2 A B 480 -29.971 14.959 105.598 1.00 32.03 O
ATOM 28 O5' A B 480 -29.046 16.534 107.350 1.00 32.03 O
TER
ATOM 2 P U A 478 -24.621 6.089 105.443 1.00 36.22 P
ATOM 3 OP1 U A 478 -25.871 6.388 106.204 1.00 36.22 O
ATOM 4 OP2 U A 478 -24.713 5.838 103.977 1.00 36.22 O
ATOM 5 O5' U A 478 -23.528 7.195 105.727 1.00 36.22 O
ATOM 6 C5' U A 478 -22.987 7.354 107.022 1.00 36.22 C
ATOM 7 C4' U A 478 -22.510 8.752 107.212 1.00 36.22 C
ATOM 8 O4' U A 478 -21.107 8.823 106.882 1.00 36.22 O
ATOM 9 C3' U A 478 -23.172 9.775 106.310 1.00 36.22 C
ATOM 10 O3' U A 478 -24.381 10.263 106.853 1.00 36.22 O
ATOM 11 C2' U A 478 -22.097 10.831 106.137 1.00 36.22 C
ATOM 12 O2' U A 478 -22.048 11.695 107.256 1.00 36.22 O
ATOM 13 C1' U A 478 -20.839 9.979 106.141 1.00 36.22 C
ATOM 14 N1 U A 478 -20.477 9.561 104.821 1.00 35.94 N
ATOM 15 C2 U A 478 -19.481 10.281 104.246 1.00 35.94 C
ATOM 16 O2 U A 478 -18.984 11.208 104.835 1.00 35.94 O
ATOM 17 N3 U A 478 -19.144 9.857 102.996 1.00 35.94 N
ATOM 18 C4 U A 478 -19.719 8.786 102.342 1.00 35.94 C
ATOM 19 O4 U A 478 -19.305 8.526 101.220 1.00 35.94 O
ATOM 20 C5 U A 478 -20.757 8.070 103.036 1.00 35.94 C
ATOM 21 C6 U A 478 -21.093 8.480 104.252 1.00 35.94 C
ATOM 22 P G A 479 -25.351 11.176 105.967 1.00 20.28 P
ATOM 23 OP1 G A 479 -26.770 10.822 106.336 1.00 20.28 O
ATOM 24 OP2 G A 479 -24.912 11.018 104.549 1.00 20.28 O
ATOM 25 O5' G A 479 -25.011 12.649 106.491 1.00 20.28 O
TER
ATOM 1 O3' U B 478 -24.381 10.263 106.853 1.00 36.22 O
ATOM 2 P G B 479 -25.351 11.176 105.967 1.00 20.28 P
ATOM 3 OP1 G B 479 -26.770 10.822 106.336 1.00 20.28 O
ATOM 4 OP2 G B 479 -24.912 11.018 104.549 1.00 20.28 O
ATOM 5 O5' G B 479 -25.011 12.649 106.491 1.00 20.28 O
ATOM 6 C5' G B 479 -24.360 13.599 105.656 1.00 20.28 C
ATOM 7 C4' G B 479 -25.258 14.753 105.325 1.00 20.28 C
ATOM 8 O4' G B 479 -24.849 15.300 104.055 1.00 20.28 O
ATOM 9 C3' G B 479 -26.732 14.401 105.188 1.00 20.28 C
ATOM 10 O3' G B 479 -27.527 15.474 105.667 1.00 20.28 O
ATOM 11 C2' G B 479 -26.932 14.253 103.689 1.00 20.28 C
ATOM 12 O2' G B 479 -28.241 14.551 103.252 1.00 20.28 O
ATOM 13 C1' G B 479 -25.912 15.238 103.123 1.00 20.28 C
ATOM 14 N9 G B 479 -25.339 14.824 101.850 1.00 20.29 N
ATOM 15 C8 G B 479 -25.610 13.710 101.103 1.00 20.29 C
ATOM 16 N7 G B 479 -24.866 13.630 100.028 1.00 20.29 N
ATOM 17 C5 G B 479 -24.048 14.753 100.071 1.00 20.29 C
ATOM 18 C6 G B 479 -23.029 15.225 99.193 1.00 20.29 C
ATOM 19 O6 G B 479 -22.600 14.749 98.140 1.00 20.29 O
ATOM 20 N1 G B 479 -22.454 16.401 99.646 1.00 20.29 N
ATOM 21 C2 G B 479 -22.808 17.056 100.800 1.00 20.29 C
ATOM 22 N2 G B 479 -22.147 18.183 101.083 1.00 20.29 N
ATOM 23 N3 G B 479 -23.747 16.632 101.626 1.00 20.29 N
ATOM 24 C4 G B 479 -24.327 15.487 101.204 1.00 20.29 C
ATOM 25 P A B 480 -28.836 15.170 106.547 1.00 32.03 P
ATOM 26 OP1 A B 480 -28.471 14.071 107.493 1.00 32.03 O
ATOM 27 OP2 A B 480 -29.971 14.959 105.598 1.00 32.03 O
ATOM 28 O5' A B 480 -29.046 16.534 107.350 1.00 32.03 O
TER
Atoms:
C4: (-19.719,8.786,102.342)
N3: (-19.144,9.857,102.996)
OP1: (-25.871,6.388,106.204)
OP2: (-24.713,5.838,103.977)
C2: (-19.481,10.281,104.246)
C1': (-20.839,9.979,106.141)
C3': (-23.172,9.775,106.310)
O5': (-23.528,7.195,105.727)
O4': (-21.107,8.823,106.882)
C5': (-22.987,7.354,107.022)
P: (-24.621,6.089,105.443)
C4': (-22.510,8.752,107.212)
C2': (-22.097,10.831,106.137)
O2': (-22.048,11.695,107.256)
N1: (-20.477,9.561,104.821)
O4: (-19.305,8.526,101.220)
O2: (-18.984,11.208,104.835)
C6: (-21.093,8.480,104.252)
C5: (-20.757,8.070,103.036)
O3': (-24.381,10.263,106.853)
N3: (-19.144,9.857,102.996)
OP1: (-25.871,6.388,106.204)
OP2: (-24.713,5.838,103.977)
C2: (-19.481,10.281,104.246)
C1': (-20.839,9.979,106.141)
C3': (-23.172,9.775,106.310)
O5': (-23.528,7.195,105.727)
O4': (-21.107,8.823,106.882)
C5': (-22.987,7.354,107.022)
P: (-24.621,6.089,105.443)
C4': (-22.510,8.752,107.212)
C2': (-22.097,10.831,106.137)
O2': (-22.048,11.695,107.256)
N1: (-20.477,9.561,104.821)
O4: (-19.305,8.526,101.220)
O2: (-18.984,11.208,104.835)
C6: (-21.093,8.480,104.252)
C5: (-20.757,8.070,103.036)
O3': (-24.381,10.263,106.853)
OP1: (-26.770,10.822,106.336)
OP2: (-24.912,11.018,104.549)
C3': (-26.732,14.401,105.188)
C1': (-25.912,15.238,103.123)
C5': (-24.360,13.599,105.656)
O6: (-22.600,14.749,98.140)
O4': (-24.849,15.300,104.055)
C8: (-25.610,13.710,101.103)
C2: (-22.808,17.056,100.800)
C6: (-23.029,15.225,99.193)
C5: (-24.048,14.753,100.071)
C4: (-24.327,15.487,101.204)
P: (-25.351,11.176,105.967)
C4': (-25.258,14.753,105.325)
C2': (-26.932,14.253,103.689)
O2': (-28.241,14.551,103.252)
N1: (-22.454,16.401,99.646)
N2: (-22.147,18.183,101.083)
N3: (-23.747,16.632,101.626)
N7: (-24.866,13.630,100.028)
N9: (-25.339,14.824,101.850)
O5': (-25.011,12.649,106.491)
O3': (-27.527,15.474,105.667)
OP2: (-24.912,11.018,104.549)
C3': (-26.732,14.401,105.188)
C1': (-25.912,15.238,103.123)
C5': (-24.360,13.599,105.656)
O6: (-22.600,14.749,98.140)
O4': (-24.849,15.300,104.055)
C8: (-25.610,13.710,101.103)
C2: (-22.808,17.056,100.800)
C6: (-23.029,15.225,99.193)
C5: (-24.048,14.753,100.071)
C4: (-24.327,15.487,101.204)
P: (-25.351,11.176,105.967)
C4': (-25.258,14.753,105.325)
C2': (-26.932,14.253,103.689)
O2': (-28.241,14.551,103.252)
N1: (-22.454,16.401,99.646)
N2: (-22.147,18.183,101.083)
N3: (-23.747,16.632,101.626)
N7: (-24.866,13.630,100.028)
N9: (-25.339,14.824,101.850)
O5': (-25.011,12.649,106.491)
O3': (-27.527,15.474,105.667)
Image (generated by PyMOL):