Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A1401:X13
Extra
PDB:
ATOM 1 O3' C A1400 -95.433 24.606 -15.696 1.00 1.43 O
ATOM 2 P C A1401 -95.163 23.130 -16.308 1.00 9.62 P
ATOM 3 OP1 C A1401 -94.343 23.314 -17.531 1.00 9.62 O
ATOM 4 OP2 C A1401 -96.474 22.432 -16.422 1.00 9.62 O
ATOM 5 O5' C A1401 -94.302 22.424 -15.171 1.00 9.62 O
ATOM 6 C5' C A1401 -92.977 22.837 -14.876 1.00 9.62 C
ATOM 7 C4' C A1401 -92.586 22.397 -13.491 1.00 9.62 C
ATOM 8 O4' C A1401 -93.668 22.689 -12.576 1.00 9.62 O
ATOM 9 C3' C A1401 -92.344 20.909 -13.313 1.00 9.62 C
ATOM 10 O3' C A1401 -91.039 20.524 -13.668 1.00 9.62 O
ATOM 11 C2' C A1401 -92.640 20.684 -11.855 1.00 9.62 C
ATOM 12 O2' C A1401 -91.527 21.067 -11.077 1.00 9.62 O
ATOM 13 C1' C A1401 -93.776 21.674 -11.615 1.00 9.62 C
ATOM 14 N1 C A1401 -95.093 21.055 -11.760 1.00 9.43 N
ATOM 15 C2 C A1401 -95.503 20.134 -10.818 1.00 9.43 C
ATOM 16 O2 C A1401 -94.724 19.894 -9.921 1.00 9.43 O
ATOM 17 N3 C A1401 -96.692 19.536 -10.887 1.00 9.43 N
ATOM 18 C4 C A1401 -97.478 19.870 -11.896 1.00 9.43 C
ATOM 19 N4 C A1401 -98.668 19.277 -11.967 1.00 9.43 N
ATOM 20 C5 C A1401 -97.094 20.819 -12.897 1.00 9.43 C
ATOM 21 C6 C A1401 -95.895 21.393 -12.793 1.00 9.43 C
ATOM 22 P C A1402 -90.827 19.176 -14.495 1.00 6.39 P
ATOM 23 OP1 C A1402 -90.151 19.541 -15.755 1.00 6.39 O
ATOM 24 OP2 C A1402 -92.164 18.497 -14.556 1.00 6.39 O
ATOM 25 O5' C A1402 -89.839 18.348 -13.578 1.00 6.39 O
TER
ATOM 1 O3' U B 12 -100.878 18.009 -7.467 1.00 6.94 O
ATOM 2 P C B 13 -101.129 18.947 -8.735 1.00 9.45 P
ATOM 3 OP1 C B 13 -100.429 18.317 -9.874 1.00 9.45 O
ATOM 4 OP2 C B 13 -100.754 20.336 -8.346 1.00 9.45 O
ATOM 5 O5' C B 13 -102.702 18.839 -8.931 1.00 9.45 O
ATOM 6 C5' C B 13 -103.273 17.745 -9.630 1.00 9.45 C
ATOM 7 C4' C B 13 -104.730 17.980 -9.930 1.00 9.45 C
ATOM 8 O4' C B 13 -105.361 18.609 -8.778 1.00 9.45 O
ATOM 9 C3' C B 13 -105.008 18.905 -11.114 1.00 9.45 C
ATOM 10 O3' C B 13 -106.220 18.484 -11.766 1.00 9.45 O
ATOM 11 C2' C B 13 -105.211 20.257 -10.422 1.00 9.45 C
ATOM 12 O2' C B 13 -105.929 21.210 -11.165 1.00 9.45 O
ATOM 13 C1' C B 13 -105.963 19.826 -9.179 1.00 9.45 C
ATOM 14 N1 C B 13 -105.890 20.777 -8.055 1.00 9.67 N
ATOM 15 C2 C B 13 -107.118 21.285 -7.572 1.00 9.67 C
ATOM 16 O2 C B 13 -108.172 20.933 -8.155 1.00 9.67 O
ATOM 17 N3 C B 13 -107.109 22.145 -6.504 1.00 9.67 N
ATOM 18 C4 C B 13 -105.938 22.483 -5.952 1.00 9.67 C
ATOM 19 N4 C B 13 -105.969 23.329 -4.940 1.00 9.67 N
ATOM 20 C5 C B 13 -104.685 21.971 -6.411 1.00 9.67 C
ATOM 21 C6 C B 13 -104.703 21.121 -7.456 1.00 9.67 C
ATOM 22 P U B 14 -106.160 17.459 -12.998 1.00 76.05 P
ATOM 23 OP1 U B 14 -107.155 17.906 -13.981 1.00 76.05 O
ATOM 24 OP2 U B 14 -106.272 16.096 -12.449 1.00 76.05 O
ATOM 25 O5' U B 14 -104.704 17.695 -13.562 1.00 76.05 O
TER
ATOM 2 P C A1401 -95.163 23.130 -16.308 1.00 9.62 P
ATOM 3 OP1 C A1401 -94.343 23.314 -17.531 1.00 9.62 O
ATOM 4 OP2 C A1401 -96.474 22.432 -16.422 1.00 9.62 O
ATOM 5 O5' C A1401 -94.302 22.424 -15.171 1.00 9.62 O
ATOM 6 C5' C A1401 -92.977 22.837 -14.876 1.00 9.62 C
ATOM 7 C4' C A1401 -92.586 22.397 -13.491 1.00 9.62 C
ATOM 8 O4' C A1401 -93.668 22.689 -12.576 1.00 9.62 O
ATOM 9 C3' C A1401 -92.344 20.909 -13.313 1.00 9.62 C
ATOM 10 O3' C A1401 -91.039 20.524 -13.668 1.00 9.62 O
ATOM 11 C2' C A1401 -92.640 20.684 -11.855 1.00 9.62 C
ATOM 12 O2' C A1401 -91.527 21.067 -11.077 1.00 9.62 O
ATOM 13 C1' C A1401 -93.776 21.674 -11.615 1.00 9.62 C
ATOM 14 N1 C A1401 -95.093 21.055 -11.760 1.00 9.43 N
ATOM 15 C2 C A1401 -95.503 20.134 -10.818 1.00 9.43 C
ATOM 16 O2 C A1401 -94.724 19.894 -9.921 1.00 9.43 O
ATOM 17 N3 C A1401 -96.692 19.536 -10.887 1.00 9.43 N
ATOM 18 C4 C A1401 -97.478 19.870 -11.896 1.00 9.43 C
ATOM 19 N4 C A1401 -98.668 19.277 -11.967 1.00 9.43 N
ATOM 20 C5 C A1401 -97.094 20.819 -12.897 1.00 9.43 C
ATOM 21 C6 C A1401 -95.895 21.393 -12.793 1.00 9.43 C
ATOM 22 P C A1402 -90.827 19.176 -14.495 1.00 6.39 P
ATOM 23 OP1 C A1402 -90.151 19.541 -15.755 1.00 6.39 O
ATOM 24 OP2 C A1402 -92.164 18.497 -14.556 1.00 6.39 O
ATOM 25 O5' C A1402 -89.839 18.348 -13.578 1.00 6.39 O
TER
ATOM 1 O3' U B 12 -100.878 18.009 -7.467 1.00 6.94 O
ATOM 2 P C B 13 -101.129 18.947 -8.735 1.00 9.45 P
ATOM 3 OP1 C B 13 -100.429 18.317 -9.874 1.00 9.45 O
ATOM 4 OP2 C B 13 -100.754 20.336 -8.346 1.00 9.45 O
ATOM 5 O5' C B 13 -102.702 18.839 -8.931 1.00 9.45 O
ATOM 6 C5' C B 13 -103.273 17.745 -9.630 1.00 9.45 C
ATOM 7 C4' C B 13 -104.730 17.980 -9.930 1.00 9.45 C
ATOM 8 O4' C B 13 -105.361 18.609 -8.778 1.00 9.45 O
ATOM 9 C3' C B 13 -105.008 18.905 -11.114 1.00 9.45 C
ATOM 10 O3' C B 13 -106.220 18.484 -11.766 1.00 9.45 O
ATOM 11 C2' C B 13 -105.211 20.257 -10.422 1.00 9.45 C
ATOM 12 O2' C B 13 -105.929 21.210 -11.165 1.00 9.45 O
ATOM 13 C1' C B 13 -105.963 19.826 -9.179 1.00 9.45 C
ATOM 14 N1 C B 13 -105.890 20.777 -8.055 1.00 9.67 N
ATOM 15 C2 C B 13 -107.118 21.285 -7.572 1.00 9.67 C
ATOM 16 O2 C B 13 -108.172 20.933 -8.155 1.00 9.67 O
ATOM 17 N3 C B 13 -107.109 22.145 -6.504 1.00 9.67 N
ATOM 18 C4 C B 13 -105.938 22.483 -5.952 1.00 9.67 C
ATOM 19 N4 C B 13 -105.969 23.329 -4.940 1.00 9.67 N
ATOM 20 C5 C B 13 -104.685 21.971 -6.411 1.00 9.67 C
ATOM 21 C6 C B 13 -104.703 21.121 -7.456 1.00 9.67 C
ATOM 22 P U B 14 -106.160 17.459 -12.998 1.00 76.05 P
ATOM 23 OP1 U B 14 -107.155 17.906 -13.981 1.00 76.05 O
ATOM 24 OP2 U B 14 -106.272 16.096 -12.449 1.00 76.05 O
ATOM 25 O5' U B 14 -104.704 17.695 -13.562 1.00 76.05 O
TER
Atoms:
C2: (-95.503,20.134,-10.818)
OP1: (-94.343,23.314,-17.531)
OP2: (-96.474,22.432,-16.422)
C4: (-97.478,19.870,-11.896)
O5': (-94.302,22.424,-15.171)
C3': (-92.344,20.909,-13.313)
C1': (-93.776,21.674,-11.615)
O4': (-93.668,22.689,-12.576)
C5': (-92.977,22.837,-14.876)
P: (-95.163,23.130,-16.308)
O2: (-94.724,19.894,-9.921)
C4': (-92.586,22.397,-13.491)
C2': (-92.640,20.684,-11.855)
O2': (-91.527,21.067,-11.077)
N1: (-95.093,21.055,-11.760)
N3: (-96.692,19.536,-10.887)
N4: (-98.668,19.277,-11.967)
C6: (-95.895,21.393,-12.793)
C5: (-97.094,20.819,-12.897)
O3': (-91.039,20.524,-13.668)
OP1: (-94.343,23.314,-17.531)
OP2: (-96.474,22.432,-16.422)
C4: (-97.478,19.870,-11.896)
O5': (-94.302,22.424,-15.171)
C3': (-92.344,20.909,-13.313)
C1': (-93.776,21.674,-11.615)
O4': (-93.668,22.689,-12.576)
C5': (-92.977,22.837,-14.876)
P: (-95.163,23.130,-16.308)
O2: (-94.724,19.894,-9.921)
C4': (-92.586,22.397,-13.491)
C2': (-92.640,20.684,-11.855)
O2': (-91.527,21.067,-11.077)
N1: (-95.093,21.055,-11.760)
N3: (-96.692,19.536,-10.887)
N4: (-98.668,19.277,-11.967)
C6: (-95.895,21.393,-12.793)
C5: (-97.094,20.819,-12.897)
O3': (-91.039,20.524,-13.668)
C2: (-107.118,21.285,-7.572)
OP1: (-100.429,18.317,-9.874)
OP2: (-100.754,20.336,-8.346)
C4: (-105.938,22.483,-5.952)
O5': (-102.702,18.839,-8.931)
C3': (-105.008,18.905,-11.114)
C1': (-105.963,19.826,-9.179)
O4': (-105.361,18.609,-8.778)
C5': (-103.273,17.745,-9.630)
P: (-101.129,18.947,-8.735)
O2: (-108.172,20.933,-8.155)
C4': (-104.730,17.980,-9.930)
C2': (-105.211,20.257,-10.422)
O2': (-105.929,21.210,-11.165)
N1: (-105.890,20.777,-8.055)
N3: (-107.109,22.145,-6.504)
N4: (-105.969,23.329,-4.940)
C6: (-104.703,21.121,-7.456)
C5: (-104.685,21.971,-6.411)
O3': (-106.220,18.484,-11.766)
OP1: (-100.429,18.317,-9.874)
OP2: (-100.754,20.336,-8.346)
C4: (-105.938,22.483,-5.952)
O5': (-102.702,18.839,-8.931)
C3': (-105.008,18.905,-11.114)
C1': (-105.963,19.826,-9.179)
O4': (-105.361,18.609,-8.778)
C5': (-103.273,17.745,-9.630)
P: (-101.129,18.947,-8.735)
O2: (-108.172,20.933,-8.155)
C4': (-104.730,17.980,-9.930)
C2': (-105.211,20.257,-10.422)
O2': (-105.929,21.210,-11.165)
N1: (-105.890,20.777,-8.055)
N3: (-107.109,22.145,-6.504)
N4: (-105.969,23.329,-4.940)
C6: (-104.703,21.121,-7.456)
C5: (-104.685,21.971,-6.411)
O3': (-106.220,18.484,-11.766)
Image (generated by PyMOL):