Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DJ0:A155:A154
Extra
PDB:
ATOM 1 O3' U A 154 53.531 12.718 24.970 1.00 36.73 O
ATOM 2 P C A 155 52.561 13.526 23.980 1.00 36.30 P
ATOM 3 OP1 C A 155 52.142 14.748 24.701 1.00 36.75 O
ATOM 4 OP2 C A 155 51.554 12.596 23.428 1.00 35.99 O
ATOM 5 O5' C A 155 53.501 13.937 22.760 1.00 36.32 O
ATOM 6 C5' C A 155 54.663 14.729 22.980 1.00 35.78 C
ATOM 7 C4' C A 155 55.617 14.590 21.810 1.00 35.24 C
ATOM 8 O4' C A 155 55.954 13.194 21.603 1.00 34.88 O
ATOM 9 C3' C A 155 55.064 15.003 20.453 1.00 34.95 C
ATOM 10 O3' C A 155 55.028 16.419 20.326 1.00 34.56 O
ATOM 11 C2' C A 155 56.103 14.349 19.549 1.00 34.83 C
ATOM 12 O2' C A 155 57.350 15.019 19.546 1.00 35.05 O
ATOM 13 C1' C A 155 56.258 12.991 20.232 1.00 34.26 C
ATOM 14 N1 C A 155 55.371 11.950 19.630 1.00 33.65 N
ATOM 15 C2 C A 155 55.729 11.388 18.393 1.00 33.50 C
ATOM 16 O2 C A 155 56.766 11.750 17.828 1.00 33.79 O
ATOM 17 N3 C A 155 54.929 10.447 17.835 1.00 33.20 N
ATOM 18 C4 C A 155 53.813 10.067 18.457 1.00 33.72 C
ATOM 19 N4 C A 155 53.071 9.135 17.853 1.00 33.86 N
ATOM 20 C5 C A 155 53.419 10.623 19.718 1.00 33.69 C
ATOM 21 C6 C A 155 54.222 11.551 20.262 1.00 33.79 C
ATOM 22 P C A 156 54.020 17.141 19.307 1.00 33.80 P
ATOM 23 OP1 C A 156 54.094 18.592 19.604 1.00 34.36 O
ATOM 24 OP2 C A 156 52.710 16.451 19.349 1.00 33.52 O
ATOM 25 O5' C A 156 54.677 16.859 17.879 1.00 32.07 O
TER
ATOM 1 O3' C B 153 51.109 7.129 26.453 1.00 39.48 O
ATOM 2 P U B 154 50.608 8.309 25.500 1.00 38.91 P
ATOM 3 OP1 U B 154 49.711 9.149 26.326 1.00 39.37 O
ATOM 4 OP2 U B 154 50.118 7.739 24.222 1.00 39.05 O
ATOM 5 O5' U B 154 51.954 9.124 25.201 1.00 38.64 O
ATOM 6 C5' U B 154 52.525 9.952 26.212 1.00 38.21 C
ATOM 7 C4' U B 154 53.898 10.459 25.818 1.00 37.71 C
ATOM 8 O4' U B 154 54.724 9.352 25.376 1.00 37.66 O
ATOM 9 C3' U B 154 53.929 11.401 24.626 1.00 37.46 C
ATOM 10 O3' U B 154 53.531 12.718 24.970 1.00 36.73 O
ATOM 11 C2' U B 154 55.399 11.298 24.223 1.00 37.83 C
ATOM 12 O2' U B 154 56.301 11.978 25.082 1.00 38.04 O
ATOM 13 C1' U B 154 55.598 9.791 24.345 1.00 37.31 C
ATOM 14 N1 U B 154 55.358 9.024 23.063 1.00 36.93 N
ATOM 15 C2 U B 154 56.298 9.097 22.047 1.00 36.96 C
ATOM 16 O2 U B 154 57.319 9.755 22.129 1.00 36.89 O
ATOM 17 N3 U B 154 56.007 8.362 20.917 1.00 36.74 N
ATOM 18 C4 U B 154 54.887 7.573 20.706 1.00 36.74 C
ATOM 19 O4 U B 154 54.751 6.968 19.645 1.00 36.60 O
ATOM 20 C5 U B 154 53.953 7.548 21.805 1.00 36.45 C
ATOM 21 C6 U B 154 54.217 8.255 22.912 1.00 36.41 C
ATOM 22 P C B 155 52.561 13.526 23.980 1.00 36.30 P
ATOM 23 OP1 C B 155 52.142 14.748 24.701 1.00 36.75 O
ATOM 24 OP2 C B 155 51.554 12.596 23.428 1.00 35.99 O
ATOM 25 O5' C B 155 53.501 13.937 22.760 1.00 36.32 O
TER
ATOM 2 P C A 155 52.561 13.526 23.980 1.00 36.30 P
ATOM 3 OP1 C A 155 52.142 14.748 24.701 1.00 36.75 O
ATOM 4 OP2 C A 155 51.554 12.596 23.428 1.00 35.99 O
ATOM 5 O5' C A 155 53.501 13.937 22.760 1.00 36.32 O
ATOM 6 C5' C A 155 54.663 14.729 22.980 1.00 35.78 C
ATOM 7 C4' C A 155 55.617 14.590 21.810 1.00 35.24 C
ATOM 8 O4' C A 155 55.954 13.194 21.603 1.00 34.88 O
ATOM 9 C3' C A 155 55.064 15.003 20.453 1.00 34.95 C
ATOM 10 O3' C A 155 55.028 16.419 20.326 1.00 34.56 O
ATOM 11 C2' C A 155 56.103 14.349 19.549 1.00 34.83 C
ATOM 12 O2' C A 155 57.350 15.019 19.546 1.00 35.05 O
ATOM 13 C1' C A 155 56.258 12.991 20.232 1.00 34.26 C
ATOM 14 N1 C A 155 55.371 11.950 19.630 1.00 33.65 N
ATOM 15 C2 C A 155 55.729 11.388 18.393 1.00 33.50 C
ATOM 16 O2 C A 155 56.766 11.750 17.828 1.00 33.79 O
ATOM 17 N3 C A 155 54.929 10.447 17.835 1.00 33.20 N
ATOM 18 C4 C A 155 53.813 10.067 18.457 1.00 33.72 C
ATOM 19 N4 C A 155 53.071 9.135 17.853 1.00 33.86 N
ATOM 20 C5 C A 155 53.419 10.623 19.718 1.00 33.69 C
ATOM 21 C6 C A 155 54.222 11.551 20.262 1.00 33.79 C
ATOM 22 P C A 156 54.020 17.141 19.307 1.00 33.80 P
ATOM 23 OP1 C A 156 54.094 18.592 19.604 1.00 34.36 O
ATOM 24 OP2 C A 156 52.710 16.451 19.349 1.00 33.52 O
ATOM 25 O5' C A 156 54.677 16.859 17.879 1.00 32.07 O
TER
ATOM 1 O3' C B 153 51.109 7.129 26.453 1.00 39.48 O
ATOM 2 P U B 154 50.608 8.309 25.500 1.00 38.91 P
ATOM 3 OP1 U B 154 49.711 9.149 26.326 1.00 39.37 O
ATOM 4 OP2 U B 154 50.118 7.739 24.222 1.00 39.05 O
ATOM 5 O5' U B 154 51.954 9.124 25.201 1.00 38.64 O
ATOM 6 C5' U B 154 52.525 9.952 26.212 1.00 38.21 C
ATOM 7 C4' U B 154 53.898 10.459 25.818 1.00 37.71 C
ATOM 8 O4' U B 154 54.724 9.352 25.376 1.00 37.66 O
ATOM 9 C3' U B 154 53.929 11.401 24.626 1.00 37.46 C
ATOM 10 O3' U B 154 53.531 12.718 24.970 1.00 36.73 O
ATOM 11 C2' U B 154 55.399 11.298 24.223 1.00 37.83 C
ATOM 12 O2' U B 154 56.301 11.978 25.082 1.00 38.04 O
ATOM 13 C1' U B 154 55.598 9.791 24.345 1.00 37.31 C
ATOM 14 N1 U B 154 55.358 9.024 23.063 1.00 36.93 N
ATOM 15 C2 U B 154 56.298 9.097 22.047 1.00 36.96 C
ATOM 16 O2 U B 154 57.319 9.755 22.129 1.00 36.89 O
ATOM 17 N3 U B 154 56.007 8.362 20.917 1.00 36.74 N
ATOM 18 C4 U B 154 54.887 7.573 20.706 1.00 36.74 C
ATOM 19 O4 U B 154 54.751 6.968 19.645 1.00 36.60 O
ATOM 20 C5 U B 154 53.953 7.548 21.805 1.00 36.45 C
ATOM 21 C6 U B 154 54.217 8.255 22.912 1.00 36.41 C
ATOM 22 P C B 155 52.561 13.526 23.980 1.00 36.30 P
ATOM 23 OP1 C B 155 52.142 14.748 24.701 1.00 36.75 O
ATOM 24 OP2 C B 155 51.554 12.596 23.428 1.00 35.99 O
ATOM 25 O5' C B 155 53.501 13.937 22.760 1.00 36.32 O
TER
Atoms:
C2: (55.729,11.388,18.393)
OP1: (52.142,14.748,24.701)
OP2: (51.554,12.596,23.428)
C4: (53.813,10.067,18.457)
O5': (53.501,13.937,22.760)
C3': (55.064,15.003,20.453)
C1': (56.258,12.991,20.232)
O4': (55.954,13.194,21.603)
C5': (54.663,14.729,22.980)
P: (52.561,13.526,23.980)
O2: (56.766,11.750,17.828)
C4': (55.617,14.590,21.810)
C2': (56.103,14.349,19.549)
O2': (57.350,15.019,19.546)
N1: (55.371,11.950,19.630)
N3: (54.929,10.447,17.835)
N4: (53.071,9.135,17.853)
C6: (54.222,11.551,20.262)
C5: (53.419,10.623,19.718)
O3': (55.028,16.419,20.326)
OP1: (52.142,14.748,24.701)
OP2: (51.554,12.596,23.428)
C4: (53.813,10.067,18.457)
O5': (53.501,13.937,22.760)
C3': (55.064,15.003,20.453)
C1': (56.258,12.991,20.232)
O4': (55.954,13.194,21.603)
C5': (54.663,14.729,22.980)
P: (52.561,13.526,23.980)
O2: (56.766,11.750,17.828)
C4': (55.617,14.590,21.810)
C2': (56.103,14.349,19.549)
O2': (57.350,15.019,19.546)
N1: (55.371,11.950,19.630)
N3: (54.929,10.447,17.835)
N4: (53.071,9.135,17.853)
C6: (54.222,11.551,20.262)
C5: (53.419,10.623,19.718)
O3': (55.028,16.419,20.326)
C4: (54.887,7.573,20.706)
N3: (56.007,8.362,20.917)
OP1: (49.711,9.149,26.326)
OP2: (50.118,7.739,24.222)
C2: (56.298,9.097,22.047)
C1': (55.598,9.791,24.345)
C3': (53.929,11.401,24.626)
O5': (51.954,9.124,25.201)
O4': (54.724,9.352,25.376)
C5': (52.525,9.952,26.212)
P: (50.608,8.309,25.500)
C4': (53.898,10.459,25.818)
C2': (55.399,11.298,24.223)
O2': (56.301,11.978,25.082)
N1: (55.358,9.024,23.063)
O4: (54.751,6.968,19.645)
O2: (57.319,9.755,22.129)
C6: (54.217,8.255,22.912)
C5: (53.953,7.548,21.805)
O3': (53.531,12.718,24.970)
N3: (56.007,8.362,20.917)
OP1: (49.711,9.149,26.326)
OP2: (50.118,7.739,24.222)
C2: (56.298,9.097,22.047)
C1': (55.598,9.791,24.345)
C3': (53.929,11.401,24.626)
O5': (51.954,9.124,25.201)
O4': (54.724,9.352,25.376)
C5': (52.525,9.952,26.212)
P: (50.608,8.309,25.500)
C4': (53.898,10.459,25.818)
C2': (55.399,11.298,24.223)
O2': (56.301,11.978,25.082)
N1: (55.358,9.024,23.063)
O4: (54.751,6.968,19.645)
O2: (57.319,9.755,22.129)
C6: (54.217,8.255,22.912)
C5: (53.953,7.548,21.805)
O3': (53.531,12.718,24.970)
Image (generated by PyMOL):