Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A1401:X14
Extra
PDB:
ATOM 1 O3' C A1400 -48.133 97.437 79.341 1.00 9.75 O
ATOM 2 P C A1401 -48.064 96.936 80.866 1.00 15.10 P
ATOM 3 OP1 C A1401 -47.093 95.780 80.913 1.00 15.10 O
ATOM 4 OP2 C A1401 -49.473 96.732 81.333 1.00 15.10 O
ATOM 5 O5' C A1401 -47.441 98.196 81.599 1.00 15.10 O
ATOM 6 C5' C A1401 -46.180 98.715 81.215 1.00 15.10 C
ATOM 7 C4' C A1401 -45.864 99.960 81.982 1.00 15.10 C
ATOM 8 O4' C A1401 -46.740 101.020 81.544 1.00 15.10 O
ATOM 9 C3' C A1401 -46.087 99.871 83.487 1.00 15.10 C
ATOM 10 O3' C A1401 -44.964 99.339 84.166 1.00 15.10 O
ATOM 11 C2' C A1401 -46.411 101.305 83.867 1.00 15.10 C
ATOM 12 O2' C A1401 -45.226 102.087 83.947 1.00 15.10 O
ATOM 13 C1' C A1401 -47.193 101.763 82.648 1.00 15.10 C
ATOM 14 N1 C A1401 -48.627 101.534 82.791 1.00 14.89 N
ATOM 15 C2 C A1401 -49.366 102.515 83.406 1.00 14.89 C
ATOM 16 O2 C A1401 -48.757 103.499 83.836 1.00 14.89 O
ATOM 17 N3 C A1401 -50.700 102.355 83.532 1.00 14.89 N
ATOM 18 C4 C A1401 -51.289 101.270 83.046 1.00 14.89 C
ATOM 19 N4 C A1401 -52.607 101.171 83.200 1.00 14.89 N
ATOM 20 C5 C A1401 -50.548 100.251 82.392 1.00 14.89 C
ATOM 21 C6 C A1401 -49.230 100.430 82.277 1.00 14.89 C
ATOM 22 P C A1402 -45.050 98.963 85.720 1.00 10.45 P
ATOM 23 OP1 C A1402 -44.084 97.848 85.936 1.00 10.45 O
ATOM 24 OP2 C A1402 -46.476 98.762 86.046 1.00 10.45 O
ATOM 25 O5' C A1402 -44.530 100.278 86.432 1.00 10.45 O
TER
ATOM 1 O3' U B 13 -55.165 105.789 84.389 1.00 15.97 O
ATOM 2 P C B 14 -55.104 104.458 83.517 1.00 22.34 P
ATOM 3 OP1 C B 14 -54.561 103.403 84.375 1.00 22.34 O
ATOM 4 OP2 C B 14 -54.391 104.792 82.254 1.00 22.34 O
ATOM 5 O5' C B 14 -56.634 104.174 83.210 1.00 22.34 O
ATOM 6 C5' C B 14 -57.498 103.642 84.203 1.00 22.34 C
ATOM 7 C4' C B 14 -58.806 103.185 83.602 1.00 22.34 C
ATOM 8 O4' C B 14 -59.305 104.233 82.729 1.00 22.34 O
ATOM 9 C3' C B 14 -58.735 101.912 82.745 1.00 22.34 C
ATOM 10 O3' C B 14 -59.947 101.164 82.878 1.00 22.34 O
ATOM 11 C2' C B 14 -58.636 102.459 81.327 1.00 22.34 C
ATOM 12 O2' C B 14 -59.128 101.583 80.338 1.00 22.34 O
ATOM 13 C1' C B 14 -59.476 103.733 81.416 1.00 22.34 C
ATOM 14 N1 C B 14 -59.063 104.790 80.484 1.00 23.17 N
ATOM 15 C2 C B 14 -60.036 105.524 79.790 1.00 23.17 C
ATOM 16 O2 C B 14 -61.235 105.230 79.961 1.00 23.17 O
ATOM 17 N3 C B 14 -59.653 106.525 78.947 1.00 23.17 N
ATOM 18 C4 C B 14 -58.342 106.786 78.818 1.00 23.17 C
ATOM 19 N4 C B 14 -57.953 107.759 78.003 1.00 23.17 N
ATOM 20 C5 C B 14 -57.338 106.062 79.521 1.00 23.17 C
ATOM 21 C6 C B 14 -57.740 105.086 80.346 1.00 23.17 C
ATOM 22 P U B 15 -59.977 99.813 83.724 1.00 84.51 P
ATOM 23 OP1 U B 15 -60.600 98.792 82.872 1.00 84.51 O
ATOM 24 OP2 U B 15 -60.602 100.128 85.024 1.00 84.51 O
ATOM 25 O5' U B 15 -58.434 99.482 83.920 1.00 84.51 O
TER
ATOM 2 P C A1401 -48.064 96.936 80.866 1.00 15.10 P
ATOM 3 OP1 C A1401 -47.093 95.780 80.913 1.00 15.10 O
ATOM 4 OP2 C A1401 -49.473 96.732 81.333 1.00 15.10 O
ATOM 5 O5' C A1401 -47.441 98.196 81.599 1.00 15.10 O
ATOM 6 C5' C A1401 -46.180 98.715 81.215 1.00 15.10 C
ATOM 7 C4' C A1401 -45.864 99.960 81.982 1.00 15.10 C
ATOM 8 O4' C A1401 -46.740 101.020 81.544 1.00 15.10 O
ATOM 9 C3' C A1401 -46.087 99.871 83.487 1.00 15.10 C
ATOM 10 O3' C A1401 -44.964 99.339 84.166 1.00 15.10 O
ATOM 11 C2' C A1401 -46.411 101.305 83.867 1.00 15.10 C
ATOM 12 O2' C A1401 -45.226 102.087 83.947 1.00 15.10 O
ATOM 13 C1' C A1401 -47.193 101.763 82.648 1.00 15.10 C
ATOM 14 N1 C A1401 -48.627 101.534 82.791 1.00 14.89 N
ATOM 15 C2 C A1401 -49.366 102.515 83.406 1.00 14.89 C
ATOM 16 O2 C A1401 -48.757 103.499 83.836 1.00 14.89 O
ATOM 17 N3 C A1401 -50.700 102.355 83.532 1.00 14.89 N
ATOM 18 C4 C A1401 -51.289 101.270 83.046 1.00 14.89 C
ATOM 19 N4 C A1401 -52.607 101.171 83.200 1.00 14.89 N
ATOM 20 C5 C A1401 -50.548 100.251 82.392 1.00 14.89 C
ATOM 21 C6 C A1401 -49.230 100.430 82.277 1.00 14.89 C
ATOM 22 P C A1402 -45.050 98.963 85.720 1.00 10.45 P
ATOM 23 OP1 C A1402 -44.084 97.848 85.936 1.00 10.45 O
ATOM 24 OP2 C A1402 -46.476 98.762 86.046 1.00 10.45 O
ATOM 25 O5' C A1402 -44.530 100.278 86.432 1.00 10.45 O
TER
ATOM 1 O3' U B 13 -55.165 105.789 84.389 1.00 15.97 O
ATOM 2 P C B 14 -55.104 104.458 83.517 1.00 22.34 P
ATOM 3 OP1 C B 14 -54.561 103.403 84.375 1.00 22.34 O
ATOM 4 OP2 C B 14 -54.391 104.792 82.254 1.00 22.34 O
ATOM 5 O5' C B 14 -56.634 104.174 83.210 1.00 22.34 O
ATOM 6 C5' C B 14 -57.498 103.642 84.203 1.00 22.34 C
ATOM 7 C4' C B 14 -58.806 103.185 83.602 1.00 22.34 C
ATOM 8 O4' C B 14 -59.305 104.233 82.729 1.00 22.34 O
ATOM 9 C3' C B 14 -58.735 101.912 82.745 1.00 22.34 C
ATOM 10 O3' C B 14 -59.947 101.164 82.878 1.00 22.34 O
ATOM 11 C2' C B 14 -58.636 102.459 81.327 1.00 22.34 C
ATOM 12 O2' C B 14 -59.128 101.583 80.338 1.00 22.34 O
ATOM 13 C1' C B 14 -59.476 103.733 81.416 1.00 22.34 C
ATOM 14 N1 C B 14 -59.063 104.790 80.484 1.00 23.17 N
ATOM 15 C2 C B 14 -60.036 105.524 79.790 1.00 23.17 C
ATOM 16 O2 C B 14 -61.235 105.230 79.961 1.00 23.17 O
ATOM 17 N3 C B 14 -59.653 106.525 78.947 1.00 23.17 N
ATOM 18 C4 C B 14 -58.342 106.786 78.818 1.00 23.17 C
ATOM 19 N4 C B 14 -57.953 107.759 78.003 1.00 23.17 N
ATOM 20 C5 C B 14 -57.338 106.062 79.521 1.00 23.17 C
ATOM 21 C6 C B 14 -57.740 105.086 80.346 1.00 23.17 C
ATOM 22 P U B 15 -59.977 99.813 83.724 1.00 84.51 P
ATOM 23 OP1 U B 15 -60.600 98.792 82.872 1.00 84.51 O
ATOM 24 OP2 U B 15 -60.602 100.128 85.024 1.00 84.51 O
ATOM 25 O5' U B 15 -58.434 99.482 83.920 1.00 84.51 O
TER
Atoms:
C2: (-49.366,102.515,83.406)
OP1: (-47.093,95.780,80.913)
OP2: (-49.473,96.732,81.333)
C4: (-51.289,101.270,83.046)
O5': (-47.441,98.196,81.599)
C3': (-46.087,99.871,83.487)
C1': (-47.193,101.763,82.648)
O4': (-46.740,101.020,81.544)
C5': (-46.180,98.715,81.215)
P: (-48.064,96.936,80.866)
O2: (-48.757,103.499,83.836)
C4': (-45.864,99.960,81.982)
C2': (-46.411,101.305,83.867)
O2': (-45.226,102.087,83.947)
N1: (-48.627,101.534,82.791)
N3: (-50.700,102.355,83.532)
N4: (-52.607,101.171,83.200)
C6: (-49.230,100.430,82.277)
C5: (-50.548,100.251,82.392)
O3': (-44.964,99.339,84.166)
OP1: (-47.093,95.780,80.913)
OP2: (-49.473,96.732,81.333)
C4: (-51.289,101.270,83.046)
O5': (-47.441,98.196,81.599)
C3': (-46.087,99.871,83.487)
C1': (-47.193,101.763,82.648)
O4': (-46.740,101.020,81.544)
C5': (-46.180,98.715,81.215)
P: (-48.064,96.936,80.866)
O2: (-48.757,103.499,83.836)
C4': (-45.864,99.960,81.982)
C2': (-46.411,101.305,83.867)
O2': (-45.226,102.087,83.947)
N1: (-48.627,101.534,82.791)
N3: (-50.700,102.355,83.532)
N4: (-52.607,101.171,83.200)
C6: (-49.230,100.430,82.277)
C5: (-50.548,100.251,82.392)
O3': (-44.964,99.339,84.166)
C2: (-60.036,105.524,79.790)
OP1: (-54.561,103.403,84.375)
OP2: (-54.391,104.792,82.254)
C4: (-58.342,106.786,78.818)
O5': (-56.634,104.174,83.210)
C3': (-58.735,101.912,82.745)
C1': (-59.476,103.733,81.416)
O4': (-59.305,104.233,82.729)
C5': (-57.498,103.642,84.203)
P: (-55.104,104.458,83.517)
O2: (-61.235,105.230,79.961)
C4': (-58.806,103.185,83.602)
C2': (-58.636,102.459,81.327)
O2': (-59.128,101.583,80.338)
N1: (-59.063,104.790,80.484)
N3: (-59.653,106.525,78.947)
N4: (-57.953,107.759,78.003)
C6: (-57.740,105.086,80.346)
C5: (-57.338,106.062,79.521)
O3': (-59.947,101.164,82.878)
OP1: (-54.561,103.403,84.375)
OP2: (-54.391,104.792,82.254)
C4: (-58.342,106.786,78.818)
O5': (-56.634,104.174,83.210)
C3': (-58.735,101.912,82.745)
C1': (-59.476,103.733,81.416)
O4': (-59.305,104.233,82.729)
C5': (-57.498,103.642,84.203)
P: (-55.104,104.458,83.517)
O2: (-61.235,105.230,79.961)
C4': (-58.806,103.185,83.602)
C2': (-58.636,102.459,81.327)
O2': (-59.128,101.583,80.338)
N1: (-59.063,104.790,80.484)
N3: (-59.653,106.525,78.947)
N4: (-57.953,107.759,78.003)
C6: (-57.740,105.086,80.346)
C5: (-57.338,106.062,79.521)
O3': (-59.947,101.164,82.878)
Image (generated by PyMOL):