Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:0553:01223
Extra
PDB:
ATOM 1 O3' G A 552 -5.854 93.510 97.110 1.00 53.26 O
ATOM 2 P A A 553 -5.362 92.555 98.310 1.00 54.32 P
ATOM 3 OP1 A A 553 -5.945 91.210 98.072 1.00 51.52 O
ATOM 4 OP2 A A 553 -5.557 93.227 99.617 1.00 50.45 O
ATOM 5 O5' A A 553 -3.795 92.430 98.044 1.00 54.86 O
ATOM 6 C5' A A 553 -3.308 91.765 96.860 1.00 51.66 C
ATOM 7 C4' A A 553 -1.818 91.954 96.715 1.00 50.14 C
ATOM 8 O4' A A 553 -1.502 93.304 96.292 1.00 49.89 O
ATOM 9 C3' A A 553 -1.004 91.780 97.981 1.00 49.42 C
ATOM 10 O3' A A 553 -0.815 90.406 98.268 1.00 49.39 O
ATOM 11 C2' A A 553 0.294 92.484 97.617 1.00 47.62 C
ATOM 12 O2' A A 553 1.101 91.674 96.786 1.00 46.73 O
ATOM 13 C1' A A 553 -0.229 93.668 96.799 1.00 46.40 C
ATOM 14 N9 A A 553 -0.368 94.917 97.546 1.00 45.85 N
ATOM 15 C8 A A 553 -1.514 95.493 98.031 1.00 45.29 C
ATOM 16 N7 A A 553 -1.315 96.648 98.625 1.00 47.17 N
ATOM 17 C5 A A 553 0.056 96.843 98.529 1.00 44.84 C
ATOM 18 C6 A A 553 0.900 97.895 98.947 1.00 43.91 C
ATOM 19 N6 A A 553 0.470 98.999 99.555 1.00 44.16 N
ATOM 20 N1 A A 553 2.219 97.774 98.705 1.00 43.18 N
ATOM 21 C2 A A 553 2.657 96.675 98.077 1.00 45.41 C
ATOM 22 N3 A A 553 1.967 95.628 97.623 1.00 45.84 N
ATOM 23 C4 A A 553 0.655 95.776 97.884 1.00 46.34 C
ATOM 24 P A A 554 -0.922 89.896 99.781 1.00 49.50 P
ATOM 25 OP1 A A 554 -1.213 88.437 99.710 1.00 48.30 O
ATOM 26 OP2 A A 554 -1.832 90.807 100.539 1.00 48.86 O
ATOM 27 O5' A A 554 0.535 90.122 100.377 1.00 50.30 O
TER
ATOM 1 O3' C B1222 7.693 87.913 97.753 1.00 46.59 O
ATOM 2 P U B1223 7.324 88.113 96.207 1.00 46.27 P
ATOM 3 OP1 U B1223 6.488 86.969 95.759 1.00 47.30 O
ATOM 4 OP2 U B1223 8.590 88.415 95.487 1.00 48.06 O
ATOM 5 O5' U B1223 6.450 89.441 96.234 1.00 44.00 O
ATOM 6 C5' U B1223 5.200 89.469 96.930 1.00 44.52 C
ATOM 7 C4' U B1223 4.595 90.849 96.874 1.00 45.63 C
ATOM 8 O4' U B1223 5.394 91.764 97.664 1.00 47.05 O
ATOM 9 C3' U B1223 4.536 91.518 95.514 1.00 45.19 C
ATOM 10 O3' U B1223 3.473 91.024 94.709 1.00 47.99 O
ATOM 11 C2' U B1223 4.369 92.982 95.899 1.00 44.84 C
ATOM 12 O2' U B1223 3.067 93.329 96.296 1.00 43.21 O
ATOM 13 C1' U B1223 5.286 93.075 97.121 1.00 45.99 C
ATOM 14 N1 U B1223 6.627 93.569 96.762 1.00 44.11 N
ATOM 15 C2 U B1223 6.811 94.936 96.749 1.00 43.93 C
ATOM 16 O2 U B1223 5.936 95.724 97.062 1.00 44.22 O
ATOM 17 N3 U B1223 8.058 95.350 96.356 1.00 44.30 N
ATOM 18 C4 U B1223 9.119 94.553 95.991 1.00 43.72 C
ATOM 19 O4 U B1223 10.176 95.080 95.650 1.00 43.41 O
ATOM 20 C5 U B1223 8.858 93.145 96.050 1.00 41.90 C
ATOM 21 C6 U B1223 7.656 92.713 96.426 1.00 41.29 C
ATOM 22 P G B1224 3.506 91.253 93.113 1.00 50.33 P
ATOM 23 OP1 G B1224 2.465 90.378 92.514 1.00 48.79 O
ATOM 24 OP2 G B1224 4.912 91.133 92.640 1.00 50.86 O
ATOM 25 O5' G B1224 3.033 92.766 92.947 1.00 46.51 O
TER
ATOM 2 P A A 553 -5.362 92.555 98.310 1.00 54.32 P
ATOM 3 OP1 A A 553 -5.945 91.210 98.072 1.00 51.52 O
ATOM 4 OP2 A A 553 -5.557 93.227 99.617 1.00 50.45 O
ATOM 5 O5' A A 553 -3.795 92.430 98.044 1.00 54.86 O
ATOM 6 C5' A A 553 -3.308 91.765 96.860 1.00 51.66 C
ATOM 7 C4' A A 553 -1.818 91.954 96.715 1.00 50.14 C
ATOM 8 O4' A A 553 -1.502 93.304 96.292 1.00 49.89 O
ATOM 9 C3' A A 553 -1.004 91.780 97.981 1.00 49.42 C
ATOM 10 O3' A A 553 -0.815 90.406 98.268 1.00 49.39 O
ATOM 11 C2' A A 553 0.294 92.484 97.617 1.00 47.62 C
ATOM 12 O2' A A 553 1.101 91.674 96.786 1.00 46.73 O
ATOM 13 C1' A A 553 -0.229 93.668 96.799 1.00 46.40 C
ATOM 14 N9 A A 553 -0.368 94.917 97.546 1.00 45.85 N
ATOM 15 C8 A A 553 -1.514 95.493 98.031 1.00 45.29 C
ATOM 16 N7 A A 553 -1.315 96.648 98.625 1.00 47.17 N
ATOM 17 C5 A A 553 0.056 96.843 98.529 1.00 44.84 C
ATOM 18 C6 A A 553 0.900 97.895 98.947 1.00 43.91 C
ATOM 19 N6 A A 553 0.470 98.999 99.555 1.00 44.16 N
ATOM 20 N1 A A 553 2.219 97.774 98.705 1.00 43.18 N
ATOM 21 C2 A A 553 2.657 96.675 98.077 1.00 45.41 C
ATOM 22 N3 A A 553 1.967 95.628 97.623 1.00 45.84 N
ATOM 23 C4 A A 553 0.655 95.776 97.884 1.00 46.34 C
ATOM 24 P A A 554 -0.922 89.896 99.781 1.00 49.50 P
ATOM 25 OP1 A A 554 -1.213 88.437 99.710 1.00 48.30 O
ATOM 26 OP2 A A 554 -1.832 90.807 100.539 1.00 48.86 O
ATOM 27 O5' A A 554 0.535 90.122 100.377 1.00 50.30 O
TER
ATOM 1 O3' C B1222 7.693 87.913 97.753 1.00 46.59 O
ATOM 2 P U B1223 7.324 88.113 96.207 1.00 46.27 P
ATOM 3 OP1 U B1223 6.488 86.969 95.759 1.00 47.30 O
ATOM 4 OP2 U B1223 8.590 88.415 95.487 1.00 48.06 O
ATOM 5 O5' U B1223 6.450 89.441 96.234 1.00 44.00 O
ATOM 6 C5' U B1223 5.200 89.469 96.930 1.00 44.52 C
ATOM 7 C4' U B1223 4.595 90.849 96.874 1.00 45.63 C
ATOM 8 O4' U B1223 5.394 91.764 97.664 1.00 47.05 O
ATOM 9 C3' U B1223 4.536 91.518 95.514 1.00 45.19 C
ATOM 10 O3' U B1223 3.473 91.024 94.709 1.00 47.99 O
ATOM 11 C2' U B1223 4.369 92.982 95.899 1.00 44.84 C
ATOM 12 O2' U B1223 3.067 93.329 96.296 1.00 43.21 O
ATOM 13 C1' U B1223 5.286 93.075 97.121 1.00 45.99 C
ATOM 14 N1 U B1223 6.627 93.569 96.762 1.00 44.11 N
ATOM 15 C2 U B1223 6.811 94.936 96.749 1.00 43.93 C
ATOM 16 O2 U B1223 5.936 95.724 97.062 1.00 44.22 O
ATOM 17 N3 U B1223 8.058 95.350 96.356 1.00 44.30 N
ATOM 18 C4 U B1223 9.119 94.553 95.991 1.00 43.72 C
ATOM 19 O4 U B1223 10.176 95.080 95.650 1.00 43.41 O
ATOM 20 C5 U B1223 8.858 93.145 96.050 1.00 41.90 C
ATOM 21 C6 U B1223 7.656 92.713 96.426 1.00 41.29 C
ATOM 22 P G B1224 3.506 91.253 93.113 1.00 50.33 P
ATOM 23 OP1 G B1224 2.465 90.378 92.514 1.00 48.79 O
ATOM 24 OP2 G B1224 4.912 91.133 92.640 1.00 50.86 O
ATOM 25 O5' G B1224 3.033 92.766 92.947 1.00 46.51 O
TER
Atoms:
OP1: (-5.945,91.210,98.072)
OP2: (-5.557,93.227,99.617)
C3': (-1.004,91.780,97.981)
C1': (-0.229,93.668,96.799)
C5': (-3.308,91.765,96.860)
O4': (-1.502,93.304,96.292)
C8: (-1.514,95.493,98.031)
O2': (1.101,91.674,96.786)
C6: (0.900,97.895,98.947)
C5: (0.056,96.843,98.529)
C4: (0.655,95.776,97.884)
P: (-5.362,92.555,98.310)
C4': (-1.818,91.954,96.715)
C2': (0.294,92.484,97.617)
C2: (2.657,96.675,98.077)
N1: (2.219,97.774,98.705)
N3: (1.967,95.628,97.623)
N6: (0.470,98.999,99.555)
N7: (-1.315,96.648,98.625)
N9: (-0.368,94.917,97.546)
O5': (-3.795,92.430,98.044)
O3': (-0.815,90.406,98.268)
OP2: (-5.557,93.227,99.617)
C3': (-1.004,91.780,97.981)
C1': (-0.229,93.668,96.799)
C5': (-3.308,91.765,96.860)
O4': (-1.502,93.304,96.292)
C8: (-1.514,95.493,98.031)
O2': (1.101,91.674,96.786)
C6: (0.900,97.895,98.947)
C5: (0.056,96.843,98.529)
C4: (0.655,95.776,97.884)
P: (-5.362,92.555,98.310)
C4': (-1.818,91.954,96.715)
C2': (0.294,92.484,97.617)
C2: (2.657,96.675,98.077)
N1: (2.219,97.774,98.705)
N3: (1.967,95.628,97.623)
N6: (0.470,98.999,99.555)
N7: (-1.315,96.648,98.625)
N9: (-0.368,94.917,97.546)
O5': (-3.795,92.430,98.044)
O3': (-0.815,90.406,98.268)
C4: (9.119,94.553,95.991)
N3: (8.058,95.350,96.356)
OP1: (6.488,86.969,95.759)
OP2: (8.590,88.415,95.487)
C2: (6.811,94.936,96.749)
C1': (5.286,93.075,97.121)
C3': (4.536,91.518,95.514)
O5': (6.450,89.441,96.234)
O4': (5.394,91.764,97.664)
C5': (5.200,89.469,96.930)
P: (7.324,88.113,96.207)
C4': (4.595,90.849,96.874)
C2': (4.369,92.982,95.899)
O2': (3.067,93.329,96.296)
N1: (6.627,93.569,96.762)
O4: (10.176,95.080,95.650)
O2: (5.936,95.724,97.062)
C6: (7.656,92.713,96.426)
C5: (8.858,93.145,96.050)
O3': (3.473,91.024,94.709)
N3: (8.058,95.350,96.356)
OP1: (6.488,86.969,95.759)
OP2: (8.590,88.415,95.487)
C2: (6.811,94.936,96.749)
C1': (5.286,93.075,97.121)
C3': (4.536,91.518,95.514)
O5': (6.450,89.441,96.234)
O4': (5.394,91.764,97.664)
C5': (5.200,89.469,96.930)
P: (7.324,88.113,96.207)
C4': (4.595,90.849,96.874)
C2': (4.369,92.982,95.899)
O2': (3.067,93.329,96.296)
N1: (6.627,93.569,96.762)
O4: (10.176,95.080,95.650)
O2: (5.936,95.724,97.062)
C6: (7.656,92.713,96.426)
C5: (8.858,93.145,96.050)
O3': (3.473,91.024,94.709)
Image (generated by PyMOL):