ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CC2:0553:01223

Extra

PDB:
ATOM 1 O3' G A 552 -5.828 94.250 96.657 1.00 45.05 O
ATOM 2 P A A 553 -5.313 93.304 97.854 1.00 47.13 P
ATOM 3 OP1 A A 553 -5.924 91.963 97.660 1.00 42.22 O
ATOM 4 OP2 A A 553 -5.472 94.008 99.155 1.00 42.37 O
ATOM 5 O5' A A 553 -3.757 93.143 97.535 1.00 46.26 O
ATOM 6 C5' A A 553 -3.320 92.448 96.341 1.00 44.22 C
ATOM 7 C4' A A 553 -1.814 92.496 96.211 1.00 42.62 C
ATOM 8 O4' A A 553 -1.379 93.809 95.773 1.00 42.38 O
ATOM 9 C3' A A 553 -1.030 92.243 97.486 1.00 41.06 C
ATOM 10 O3' A A 553 -0.916 90.849 97.741 1.00 41.53 O
ATOM 11 C2' A A 553 0.313 92.884 97.165 1.00 39.53 C
ATOM 12 O2' A A 553 1.103 92.047 96.342 1.00 38.84 O
ATOM 13 C1' A A 553 -0.119 94.107 96.351 1.00 38.72 C
ATOM 14 N9 A A 553 -0.255 95.343 97.119 1.00 38.00 N
ATOM 15 C8 A A 553 -1.415 95.920 97.567 1.00 38.04 C
ATOM 16 N7 A A 553 -1.232 97.053 98.202 1.00 38.77 N
ATOM 17 C5 A A 553 0.142 97.233 98.178 1.00 37.27 C
ATOM 18 C6 A A 553 0.976 98.254 98.682 1.00 38.02 C
ATOM 19 N6 A A 553 0.528 99.329 99.336 1.00 36.75 N
ATOM 20 N1 A A 553 2.305 98.129 98.489 1.00 38.07 N
ATOM 21 C2 A A 553 2.759 97.047 97.835 1.00 38.70 C
ATOM 22 N3 A A 553 2.080 96.027 97.315 1.00 38.68 N
ATOM 23 C4 A A 553 0.759 96.181 97.522 1.00 38.48 C
ATOM 24 P A A 554 -1.035 90.302 99.248 1.00 41.67 P
ATOM 25 OP1 A A 554 -1.171 88.821 99.166 1.00 40.43 O
ATOM 26 OP2 A A 554 -2.073 91.103 99.931 1.00 41.64 O
ATOM 27 O5' A A 554 0.364 90.657 99.924 1.00 41.90 O
TER

ATOM 1 O3' C B1222 7.587 88.498 97.627 1.00 35.17 O
ATOM 2 P U B1223 7.263 88.653 96.067 1.00 36.24 P
ATOM 3 OP1 U B1223 6.444 87.480 95.662 1.00 36.18 O
ATOM 4 OP2 U B1223 8.532 88.933 95.361 1.00 36.13 O
ATOM 5 O5' U B1223 6.374 89.970 96.003 1.00 33.42 O
ATOM 6 C5' U B1223 5.050 89.978 96.541 1.00 33.23 C
ATOM 7 C4' U B1223 4.482 91.375 96.526 1.00 33.51 C
ATOM 8 O4' U B1223 5.263 92.235 97.395 1.00 34.77 O
ATOM 9 C3' U B1223 4.513 92.105 95.200 1.00 33.06 C
ATOM 10 O3' U B1223 3.476 91.682 94.335 1.00 36.67 O
ATOM 11 C2' U B1223 4.353 93.550 95.643 1.00 34.54 C
ATOM 12 O2' U B1223 3.032 93.892 95.994 1.00 33.89 O
ATOM 13 C1' U B1223 5.218 93.567 96.904 1.00 34.16 C
ATOM 14 N1 U B1223 6.583 93.996 96.577 1.00 33.96 N
ATOM 15 C2 U B1223 6.823 95.352 96.534 1.00 33.60 C
ATOM 16 O2 U B1223 5.974 96.180 96.811 1.00 31.33 O
ATOM 17 N3 U B1223 8.096 95.701 96.153 1.00 34.34 N
ATOM 18 C4 U B1223 9.126 94.844 95.824 1.00 32.85 C
ATOM 19 O4 U B1223 10.187 95.307 95.413 1.00 33.62 O
ATOM 20 C5 U B1223 8.804 93.456 95.927 1.00 32.11 C
ATOM 21 C6 U B1223 7.577 93.088 96.293 1.00 31.91 C
ATOM 22 P G B1224 3.609 91.927 92.753 1.00 38.31 P
ATOM 23 OP1 G B1224 2.719 90.939 92.084 1.00 37.82 O
ATOM 24 OP2 G B1224 5.052 91.959 92.407 1.00 41.13 O
ATOM 25 O5' G B1224 3.007 93.388 92.543 1.00 36.09 O
TER

Atoms:
OP1: (-5.924,91.963,97.660)
OP2: (-5.472,94.008,99.155)
C3': (-1.030,92.243,97.486)
C1': (-0.119,94.107,96.351)
C5': (-3.320,92.448,96.341)
O4': (-1.379,93.809,95.773)
C8: (-1.415,95.920,97.567)
O2': (1.103,92.047,96.342)
C6: (0.976,98.254,98.682)
C5: (0.142,97.233,98.178)
C4: (0.759,96.181,97.522)
P: (-5.313,93.304,97.854)
C4': (-1.814,92.496,96.211)
C2': (0.313,92.884,97.165)
C2: (2.759,97.047,97.835)
N1: (2.305,98.129,98.489)
N3: (2.080,96.027,97.315)
N6: (0.528,99.329,99.336)
N7: (-1.232,97.053,98.202)
N9: (-0.255,95.343,97.119)
O5': (-3.757,93.143,97.535)
O3': (-0.916,90.849,97.741)
C4: (9.126,94.844,95.824)
N3: (8.096,95.701,96.153)
OP1: (6.444,87.480,95.662)
OP2: (8.532,88.933,95.361)
C2: (6.823,95.352,96.534)
C1': (5.218,93.567,96.904)
C3': (4.513,92.105,95.200)
O5': (6.374,89.970,96.003)
O4': (5.263,92.235,97.395)
C5': (5.050,89.978,96.541)
P: (7.263,88.653,96.067)
C4': (4.482,91.375,96.526)
C2': (4.353,93.550,95.643)
O2': (3.032,93.892,95.994)
N1: (6.583,93.996,96.577)
O4: (10.187,95.307,95.413)
O2: (5.974,96.180,96.811)
C6: (7.577,93.088,96.293)
C5: (8.804,93.456,95.927)
O3': (3.476,91.682,94.335)
Image (generated by PyMOL):
PyMOL image
show in jmol