ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCE:0553:01223

Extra

PDB:
ATOM 1 O3' G A 552 -5.757 94.163 96.819 1.00 53.00 O
ATOM 2 P A A 553 -5.167 93.232 97.993 1.00 55.36 P
ATOM 3 OP1 A A 553 -5.732 91.863 97.831 1.00 52.74 O
ATOM 4 OP2 A A 553 -5.305 93.938 99.292 1.00 54.44 O
ATOM 5 O5' A A 553 -3.613 93.146 97.667 1.00 54.04 O
ATOM 6 C5' A A 553 -3.139 92.364 96.560 1.00 52.69 C
ATOM 7 C4' A A 553 -1.646 92.508 96.419 1.00 49.90 C
ATOM 8 O4' A A 553 -1.324 93.864 96.020 1.00 48.72 O
ATOM 9 C3' A A 553 -0.831 92.315 97.686 1.00 48.93 C
ATOM 10 O3' A A 553 -0.653 90.940 98.001 1.00 49.57 O
ATOM 11 C2' A A 553 0.471 93.001 97.307 1.00 47.06 C
ATOM 12 O2' A A 553 1.221 92.202 96.413 1.00 42.42 O
ATOM 13 C1' A A 553 -0.057 94.221 96.548 1.00 46.91 C
ATOM 14 N9 A A 553 -0.223 95.422 97.368 1.00 45.83 N
ATOM 15 C8 A A 553 -1.387 95.943 97.875 1.00 45.26 C
ATOM 16 N7 A A 553 -1.220 97.055 98.552 1.00 46.35 N
ATOM 17 C5 A A 553 0.150 97.281 98.490 1.00 45.90 C
ATOM 18 C6 A A 553 0.970 98.309 99.004 1.00 45.54 C
ATOM 19 N6 A A 553 0.510 99.349 99.702 1.00 43.73 N
ATOM 20 N1 A A 553 2.296 98.232 98.766 1.00 44.67 N
ATOM 21 C2 A A 553 2.759 97.195 98.058 1.00 45.58 C
ATOM 22 N3 A A 553 2.094 96.175 97.519 1.00 44.87 N
ATOM 23 C4 A A 553 0.778 96.277 97.773 1.00 45.88 C
ATOM 24 P A A 554 -0.877 90.435 99.512 1.00 49.60 P
ATOM 25 OP1 A A 554 -1.184 88.979 99.437 1.00 48.54 O
ATOM 26 OP2 A A 554 -1.822 91.359 100.198 1.00 48.76 O
ATOM 27 O5' A A 554 0.539 90.631 100.209 1.00 49.71 O
TER

ATOM 1 O3' C B1222 7.628 88.528 97.744 1.00 37.64 O
ATOM 2 P U B1223 7.315 88.660 96.182 1.00 38.32 P
ATOM 3 OP1 U B1223 6.476 87.494 95.790 1.00 35.72 O
ATOM 4 OP2 U B1223 8.606 88.892 95.488 1.00 38.21 O
ATOM 5 O5' U B1223 6.458 90.000 96.114 1.00 32.84 O
ATOM 6 C5' U B1223 5.172 90.053 96.718 1.00 32.99 C
ATOM 7 C4' U B1223 4.647 91.460 96.723 1.00 34.95 C
ATOM 8 O4' U B1223 5.504 92.303 97.530 1.00 35.83 O
ATOM 9 C3' U B1223 4.604 92.188 95.397 1.00 35.84 C
ATOM 10 O3' U B1223 3.500 91.789 94.610 1.00 40.30 O
ATOM 11 C2' U B1223 4.489 93.636 95.847 1.00 36.37 C
ATOM 12 O2' U B1223 3.189 94.018 96.243 1.00 34.76 O
ATOM 13 C1' U B1223 5.411 93.637 97.066 1.00 35.98 C
ATOM 14 N1 U B1223 6.749 94.099 96.692 1.00 38.27 N
ATOM 15 C2 U B1223 6.951 95.449 96.707 1.00 38.07 C
ATOM 16 O2 U B1223 6.083 96.232 97.045 1.00 36.67 O
ATOM 17 N3 U B1223 8.201 95.853 96.317 1.00 39.58 N
ATOM 18 C4 U B1223 9.246 95.052 95.928 1.00 39.58 C
ATOM 19 O4 U B1223 10.305 95.573 95.568 1.00 41.48 O
ATOM 20 C5 U B1223 8.961 93.651 95.955 1.00 39.11 C
ATOM 21 C6 U B1223 7.752 93.233 96.328 1.00 38.41 C
ATOM 22 P G B1224 3.567 91.953 93.016 1.00 44.18 P
ATOM 23 OP1 G B1224 2.672 90.923 92.412 1.00 43.01 O
ATOM 24 OP2 G B1224 5.000 92.002 92.615 1.00 44.84 O
ATOM 25 O5' G B1224 2.940 93.395 92.773 1.00 42.29 O
TER

Atoms:
OP1: (-5.732,91.863,97.831)
OP2: (-5.305,93.938,99.292)
C3': (-0.831,92.315,97.686)
C1': (-0.057,94.221,96.548)
C5': (-3.139,92.364,96.560)
O4': (-1.324,93.864,96.020)
C8: (-1.387,95.943,97.875)
O2': (1.221,92.202,96.413)
C6: (0.970,98.309,99.004)
C5: (0.150,97.281,98.490)
C4: (0.778,96.277,97.773)
P: (-5.167,93.232,97.993)
C4': (-1.646,92.508,96.419)
C2': (0.471,93.001,97.307)
C2: (2.759,97.195,98.058)
N1: (2.296,98.232,98.766)
N3: (2.094,96.175,97.519)
N6: (0.510,99.349,99.702)
N7: (-1.220,97.055,98.552)
N9: (-0.223,95.422,97.368)
O5': (-3.613,93.146,97.667)
O3': (-0.653,90.940,98.001)
C4: (9.246,95.052,95.928)
N3: (8.201,95.853,96.317)
OP1: (6.476,87.494,95.790)
OP2: (8.606,88.892,95.488)
C2: (6.951,95.449,96.707)
C1': (5.411,93.637,97.066)
C3': (4.604,92.188,95.397)
O5': (6.458,90.000,96.114)
O4': (5.504,92.303,97.530)
C5': (5.172,90.053,96.718)
P: (7.315,88.660,96.182)
C4': (4.647,91.460,96.723)
C2': (4.489,93.636,95.847)
O2': (3.189,94.018,96.243)
N1: (6.749,94.099,96.692)
O4: (10.305,95.573,95.568)
O2: (6.083,96.232,97.045)
C6: (7.752,93.233,96.328)
C5: (8.961,93.651,95.955)
O3': (3.500,91.789,94.610)
Image (generated by PyMOL):
PyMOL image
show in jmol