Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11145:12609
Extra
PDB:
ATOM 1 O3' A A1144 36.670 1.262 30.590 1.00 42.18 O
ATOM 2 P C A1145 36.458 2.108 29.263 1.00 69.32 P
ATOM 3 OP1 C A1145 37.773 2.537 28.805 1.00 69.38 O
ATOM 4 OP2 C A1145 35.460 3.127 29.576 1.00 69.37 O
ATOM 5 O5' C A1145 35.869 1.031 28.256 1.00 69.53 O
ATOM 6 C5' C A1145 34.497 0.700 28.295 1.00 69.60 C
ATOM 7 C4' C A1145 34.241 -0.706 27.846 1.00 69.66 C
ATOM 8 O4' C A1145 33.364 -1.364 28.806 1.00 69.47 O
ATOM 9 C3' C A1145 33.498 -0.851 26.528 1.00 70.03 C
ATOM 10 O3' C A1145 34.326 -0.711 25.416 1.00 70.26 O
ATOM 11 C2' C A1145 32.909 -2.231 26.659 1.00 69.99 C
ATOM 12 O2' C A1145 33.921 -3.210 26.520 1.00 69.93 O
ATOM 13 C1' C A1145 32.436 -2.181 28.115 1.00 69.67 C
ATOM 14 N1 C A1145 31.076 -1.540 28.189 1.00 69.79 N
ATOM 15 C2 C A1145 29.941 -2.343 27.900 1.00 69.93 C
ATOM 16 O2 C A1145 30.121 -3.564 27.719 1.00 69.92 O
ATOM 17 N3 C A1145 28.680 -1.784 27.840 1.00 70.08 N
ATOM 18 C4 C A1145 28.501 -0.455 28.032 1.00 70.10 C
ATOM 19 N4 C A1145 27.254 0.059 28.002 1.00 70.25 N
ATOM 20 C5 C A1145 29.638 0.390 28.287 1.00 69.97 C
ATOM 21 C6 C A1145 30.870 -0.171 28.341 1.00 69.82 C
ATOM 22 P A A1146 33.696 -0.619 23.928 1.00 51.83 P
ATOM 23 OP1 A A1146 34.338 -1.742 23.097 1.00 51.97 O
ATOM 24 OP2 A A1146 33.840 0.834 23.464 1.00 52.01 O
ATOM 25 O5' A A1146 32.151 -0.924 24.163 1.00 51.88 O
TER
ATOM 1 O3' G B2608 22.884 -2.081 26.564 1.00 41.05 O
ATOM 2 P C B2609 23.720 -2.074 27.938 1.00 38.04 P
ATOM 3 OP1 C B2609 25.160 -2.189 27.542 1.00 37.97 O
ATOM 4 OP2 C B2609 23.133 -3.101 28.838 1.00 37.85 O
ATOM 5 O5' C B2609 23.434 -0.617 28.492 1.00 38.00 O
ATOM 6 C5' C B2609 23.527 0.506 27.627 1.00 38.25 C
ATOM 7 C4' C B2609 22.682 1.632 28.111 1.00 38.30 C
ATOM 8 O4' C B2609 21.307 1.252 28.006 1.00 38.47 O
ATOM 9 C3' C B2609 22.842 1.995 29.573 1.00 37.94 C
ATOM 10 O3' C B2609 23.967 2.785 29.789 1.00 37.81 O
ATOM 11 C2' C B2609 21.537 2.711 29.863 1.00 38.08 C
ATOM 12 O2' C B2609 21.550 4.020 29.304 1.00 38.31 O
ATOM 13 C1' C B2609 20.565 1.853 29.049 1.00 38.35 C
ATOM 14 N1 C B2609 19.913 0.770 29.848 1.00 38.18 N
ATOM 15 C2 C B2609 18.988 1.035 30.881 1.00 38.08 C
ATOM 16 O2 C B2609 18.761 2.231 31.149 1.00 38.12 O
ATOM 17 N3 C B2609 18.388 -0.001 31.538 1.00 37.95 N
ATOM 18 C4 C B2609 18.746 -1.236 31.153 1.00 37.93 C
ATOM 19 N4 C B2609 18.236 -2.301 31.760 1.00 37.82 N
ATOM 20 C5 C B2609 19.682 -1.527 30.115 1.00 38.04 C
ATOM 21 C6 C B2609 20.214 -0.511 29.478 1.00 38.16 C
ATOM 22 P U B2610 24.654 2.922 31.220 1.00 45.52 P
ATOM 23 OP1 U B2610 25.706 3.896 31.050 1.00 45.51 O
ATOM 24 OP2 U B2610 24.995 1.549 31.692 1.00 45.28 O
ATOM 25 O5' U B2610 23.519 3.527 32.137 1.00 45.48 O
TER
ATOM 2 P C A1145 36.458 2.108 29.263 1.00 69.32 P
ATOM 3 OP1 C A1145 37.773 2.537 28.805 1.00 69.38 O
ATOM 4 OP2 C A1145 35.460 3.127 29.576 1.00 69.37 O
ATOM 5 O5' C A1145 35.869 1.031 28.256 1.00 69.53 O
ATOM 6 C5' C A1145 34.497 0.700 28.295 1.00 69.60 C
ATOM 7 C4' C A1145 34.241 -0.706 27.846 1.00 69.66 C
ATOM 8 O4' C A1145 33.364 -1.364 28.806 1.00 69.47 O
ATOM 9 C3' C A1145 33.498 -0.851 26.528 1.00 70.03 C
ATOM 10 O3' C A1145 34.326 -0.711 25.416 1.00 70.26 O
ATOM 11 C2' C A1145 32.909 -2.231 26.659 1.00 69.99 C
ATOM 12 O2' C A1145 33.921 -3.210 26.520 1.00 69.93 O
ATOM 13 C1' C A1145 32.436 -2.181 28.115 1.00 69.67 C
ATOM 14 N1 C A1145 31.076 -1.540 28.189 1.00 69.79 N
ATOM 15 C2 C A1145 29.941 -2.343 27.900 1.00 69.93 C
ATOM 16 O2 C A1145 30.121 -3.564 27.719 1.00 69.92 O
ATOM 17 N3 C A1145 28.680 -1.784 27.840 1.00 70.08 N
ATOM 18 C4 C A1145 28.501 -0.455 28.032 1.00 70.10 C
ATOM 19 N4 C A1145 27.254 0.059 28.002 1.00 70.25 N
ATOM 20 C5 C A1145 29.638 0.390 28.287 1.00 69.97 C
ATOM 21 C6 C A1145 30.870 -0.171 28.341 1.00 69.82 C
ATOM 22 P A A1146 33.696 -0.619 23.928 1.00 51.83 P
ATOM 23 OP1 A A1146 34.338 -1.742 23.097 1.00 51.97 O
ATOM 24 OP2 A A1146 33.840 0.834 23.464 1.00 52.01 O
ATOM 25 O5' A A1146 32.151 -0.924 24.163 1.00 51.88 O
TER
ATOM 1 O3' G B2608 22.884 -2.081 26.564 1.00 41.05 O
ATOM 2 P C B2609 23.720 -2.074 27.938 1.00 38.04 P
ATOM 3 OP1 C B2609 25.160 -2.189 27.542 1.00 37.97 O
ATOM 4 OP2 C B2609 23.133 -3.101 28.838 1.00 37.85 O
ATOM 5 O5' C B2609 23.434 -0.617 28.492 1.00 38.00 O
ATOM 6 C5' C B2609 23.527 0.506 27.627 1.00 38.25 C
ATOM 7 C4' C B2609 22.682 1.632 28.111 1.00 38.30 C
ATOM 8 O4' C B2609 21.307 1.252 28.006 1.00 38.47 O
ATOM 9 C3' C B2609 22.842 1.995 29.573 1.00 37.94 C
ATOM 10 O3' C B2609 23.967 2.785 29.789 1.00 37.81 O
ATOM 11 C2' C B2609 21.537 2.711 29.863 1.00 38.08 C
ATOM 12 O2' C B2609 21.550 4.020 29.304 1.00 38.31 O
ATOM 13 C1' C B2609 20.565 1.853 29.049 1.00 38.35 C
ATOM 14 N1 C B2609 19.913 0.770 29.848 1.00 38.18 N
ATOM 15 C2 C B2609 18.988 1.035 30.881 1.00 38.08 C
ATOM 16 O2 C B2609 18.761 2.231 31.149 1.00 38.12 O
ATOM 17 N3 C B2609 18.388 -0.001 31.538 1.00 37.95 N
ATOM 18 C4 C B2609 18.746 -1.236 31.153 1.00 37.93 C
ATOM 19 N4 C B2609 18.236 -2.301 31.760 1.00 37.82 N
ATOM 20 C5 C B2609 19.682 -1.527 30.115 1.00 38.04 C
ATOM 21 C6 C B2609 20.214 -0.511 29.478 1.00 38.16 C
ATOM 22 P U B2610 24.654 2.922 31.220 1.00 45.52 P
ATOM 23 OP1 U B2610 25.706 3.896 31.050 1.00 45.51 O
ATOM 24 OP2 U B2610 24.995 1.549 31.692 1.00 45.28 O
ATOM 25 O5' U B2610 23.519 3.527 32.137 1.00 45.48 O
TER
Atoms:
C2: (29.941,-2.343,27.900)
OP1: (37.773,2.537,28.805)
OP2: (35.460,3.127,29.576)
C4: (28.501,-0.455,28.032)
O5': (35.869,1.031,28.256)
C3': (33.498,-0.851,26.528)
C1': (32.436,-2.181,28.115)
O4': (33.364,-1.364,28.806)
C5': (34.497,0.700,28.295)
P: (36.458,2.108,29.263)
O2: (30.121,-3.564,27.719)
C4': (34.241,-0.706,27.846)
C2': (32.909,-2.231,26.659)
O2': (33.921,-3.210,26.520)
N1: (31.076,-1.540,28.189)
N3: (28.680,-1.784,27.840)
N4: (27.254,0.059,28.002)
C6: (30.870,-0.171,28.341)
C5: (29.638,0.390,28.287)
O3': (34.326,-0.711,25.416)
OP1: (37.773,2.537,28.805)
OP2: (35.460,3.127,29.576)
C4: (28.501,-0.455,28.032)
O5': (35.869,1.031,28.256)
C3': (33.498,-0.851,26.528)
C1': (32.436,-2.181,28.115)
O4': (33.364,-1.364,28.806)
C5': (34.497,0.700,28.295)
P: (36.458,2.108,29.263)
O2: (30.121,-3.564,27.719)
C4': (34.241,-0.706,27.846)
C2': (32.909,-2.231,26.659)
O2': (33.921,-3.210,26.520)
N1: (31.076,-1.540,28.189)
N3: (28.680,-1.784,27.840)
N4: (27.254,0.059,28.002)
C6: (30.870,-0.171,28.341)
C5: (29.638,0.390,28.287)
O3': (34.326,-0.711,25.416)
C2: (18.988,1.035,30.881)
OP1: (25.160,-2.189,27.542)
OP2: (23.133,-3.101,28.838)
C4: (18.746,-1.236,31.153)
O5': (23.434,-0.617,28.492)
C3': (22.842,1.995,29.573)
C1': (20.565,1.853,29.049)
O4': (21.307,1.252,28.006)
C5': (23.527,0.506,27.627)
P: (23.720,-2.074,27.938)
O2: (18.761,2.231,31.149)
C4': (22.682,1.632,28.111)
C2': (21.537,2.711,29.863)
O2': (21.550,4.020,29.304)
N1: (19.913,0.770,29.848)
N3: (18.388,-0.001,31.538)
N4: (18.236,-2.301,31.760)
C6: (20.214,-0.511,29.478)
C5: (19.682,-1.527,30.115)
O3': (23.967,2.785,29.789)
OP1: (25.160,-2.189,27.542)
OP2: (23.133,-3.101,28.838)
C4: (18.746,-1.236,31.153)
O5': (23.434,-0.617,28.492)
C3': (22.842,1.995,29.573)
C1': (20.565,1.853,29.049)
O4': (21.307,1.252,28.006)
C5': (23.527,0.506,27.627)
P: (23.720,-2.074,27.938)
O2: (18.761,2.231,31.149)
C4': (22.682,1.632,28.111)
C2': (21.537,2.711,29.863)
O2': (21.550,4.020,29.304)
N1: (19.913,0.770,29.848)
N3: (18.388,-0.001,31.538)
N4: (18.236,-2.301,31.760)
C6: (20.214,-0.511,29.478)
C5: (19.682,-1.527,30.115)
O3': (23.967,2.785,29.789)
Image (generated by PyMOL):