Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NTA:B12:B11
Extra
PDB:
ATOM 1 O3' U A 11 13.641 21.271 -0.540 1.00 48.95 O
ATOM 2 P C A 12 14.602 21.442 -1.793 1.00 49.59 P
ATOM 3 OP1 C A 12 15.628 20.370 -1.930 1.00 46.96 O
ATOM 4 OP2 C A 12 15.001 22.858 -1.701 1.00 49.74 O
ATOM 5 O5' C A 12 13.512 21.277 -2.953 1.00 52.77 O
ATOM 6 C5' C A 12 12.889 19.992 -3.202 1.00 53.82 C
ATOM 7 C4' C A 12 12.083 19.998 -4.494 1.00 54.50 C
ATOM 8 O4' C A 12 10.965 20.920 -4.386 1.00 54.04 O
ATOM 9 C3' C A 12 12.828 20.449 -5.750 1.00 55.02 C
ATOM 10 O3' C A 12 13.592 19.386 -6.294 1.00 54.98 O
ATOM 11 C2' C A 12 11.659 20.880 -6.633 1.00 55.75 C
ATOM 12 O2' C A 12 10.953 19.814 -7.232 1.00 57.29 O
ATOM 13 C1' C A 12 10.783 21.585 -5.623 1.00 55.18 C
ATOM 14 N1 C A 12 11.143 23.015 -5.486 1.00 56.69 N
ATOM 15 C2 C A 12 10.620 23.926 -6.399 1.00 57.63 C
ATOM 16 O2 C A 12 9.861 23.515 -7.283 1.00 58.83 O
ATOM 17 N3 C A 12 10.942 25.238 -6.277 1.00 57.55 N
ATOM 18 C4 C A 12 11.755 25.645 -5.305 1.00 57.02 C
ATOM 19 N4 C A 12 12.028 26.949 -5.230 1.00 57.10 N
ATOM 20 C5 C A 12 12.310 24.733 -4.360 1.00 56.78 C
ATOM 21 C6 C A 12 11.981 23.440 -4.487 1.00 57.18 C
ATOM 22 P G A 13 14.761 19.589 -7.382 1.00 57.00 P
ATOM 23 OP1 G A 13 15.038 18.276 -8.035 1.00 54.93 O
ATOM 24 OP2 G A 13 15.882 20.318 -6.758 1.00 56.67 O
ATOM 25 O5' G A 13 14.062 20.589 -8.416 1.00 57.58 O
TER
ATOM 1 O3' G B 10 14.224 25.818 3.207 1.00 41.97 O
ATOM 2 P U B 11 14.974 25.371 1.887 1.00 44.17 P
ATOM 3 OP1 U B 11 16.146 24.580 2.288 1.00 45.25 O
ATOM 4 OP2 U B 11 15.147 26.540 1.019 1.00 45.83 O
ATOM 5 O5' U B 11 13.925 24.403 1.216 1.00 47.57 O
ATOM 6 C5' U B 11 13.519 23.244 1.923 1.00 48.93 C
ATOM 7 C4' U B 11 12.456 22.488 1.166 1.00 48.32 C
ATOM 8 O4' U B 11 11.213 23.216 1.220 1.00 48.32 O
ATOM 9 C3' U B 11 12.730 22.320 -0.312 1.00 47.80 C
ATOM 10 O3' U B 11 13.641 21.271 -0.540 1.00 48.95 O
ATOM 11 C2' U B 11 11.346 22.040 -0.830 1.00 47.19 C
ATOM 12 O2' U B 11 10.921 20.725 -0.563 1.00 44.57 O
ATOM 13 C1' U B 11 10.556 23.073 -0.029 1.00 48.65 C
ATOM 14 N1 U B 11 10.516 24.408 -0.679 1.00 49.98 N
ATOM 15 C2 U B 11 9.543 24.685 -1.622 1.00 49.71 C
ATOM 16 O2 U B 11 8.679 23.895 -1.951 1.00 50.71 O
ATOM 17 N3 U B 11 9.601 25.946 -2.154 1.00 49.01 N
ATOM 18 C4 U B 11 10.527 26.924 -1.859 1.00 48.76 C
ATOM 19 O4 U B 11 10.463 28.000 -2.418 1.00 49.07 O
ATOM 20 C5 U B 11 11.518 26.566 -0.885 1.00 49.96 C
ATOM 21 C6 U B 11 11.477 25.349 -0.340 1.00 50.27 C
ATOM 22 P C B 12 14.602 21.442 -1.793 1.00 49.59 P
ATOM 23 OP1 C B 12 15.628 20.370 -1.930 1.00 46.96 O
ATOM 24 OP2 C B 12 15.001 22.858 -1.701 1.00 49.74 O
ATOM 25 O5' C B 12 13.512 21.277 -2.953 1.00 52.77 O
TER
ATOM 2 P C A 12 14.602 21.442 -1.793 1.00 49.59 P
ATOM 3 OP1 C A 12 15.628 20.370 -1.930 1.00 46.96 O
ATOM 4 OP2 C A 12 15.001 22.858 -1.701 1.00 49.74 O
ATOM 5 O5' C A 12 13.512 21.277 -2.953 1.00 52.77 O
ATOM 6 C5' C A 12 12.889 19.992 -3.202 1.00 53.82 C
ATOM 7 C4' C A 12 12.083 19.998 -4.494 1.00 54.50 C
ATOM 8 O4' C A 12 10.965 20.920 -4.386 1.00 54.04 O
ATOM 9 C3' C A 12 12.828 20.449 -5.750 1.00 55.02 C
ATOM 10 O3' C A 12 13.592 19.386 -6.294 1.00 54.98 O
ATOM 11 C2' C A 12 11.659 20.880 -6.633 1.00 55.75 C
ATOM 12 O2' C A 12 10.953 19.814 -7.232 1.00 57.29 O
ATOM 13 C1' C A 12 10.783 21.585 -5.623 1.00 55.18 C
ATOM 14 N1 C A 12 11.143 23.015 -5.486 1.00 56.69 N
ATOM 15 C2 C A 12 10.620 23.926 -6.399 1.00 57.63 C
ATOM 16 O2 C A 12 9.861 23.515 -7.283 1.00 58.83 O
ATOM 17 N3 C A 12 10.942 25.238 -6.277 1.00 57.55 N
ATOM 18 C4 C A 12 11.755 25.645 -5.305 1.00 57.02 C
ATOM 19 N4 C A 12 12.028 26.949 -5.230 1.00 57.10 N
ATOM 20 C5 C A 12 12.310 24.733 -4.360 1.00 56.78 C
ATOM 21 C6 C A 12 11.981 23.440 -4.487 1.00 57.18 C
ATOM 22 P G A 13 14.761 19.589 -7.382 1.00 57.00 P
ATOM 23 OP1 G A 13 15.038 18.276 -8.035 1.00 54.93 O
ATOM 24 OP2 G A 13 15.882 20.318 -6.758 1.00 56.67 O
ATOM 25 O5' G A 13 14.062 20.589 -8.416 1.00 57.58 O
TER
ATOM 1 O3' G B 10 14.224 25.818 3.207 1.00 41.97 O
ATOM 2 P U B 11 14.974 25.371 1.887 1.00 44.17 P
ATOM 3 OP1 U B 11 16.146 24.580 2.288 1.00 45.25 O
ATOM 4 OP2 U B 11 15.147 26.540 1.019 1.00 45.83 O
ATOM 5 O5' U B 11 13.925 24.403 1.216 1.00 47.57 O
ATOM 6 C5' U B 11 13.519 23.244 1.923 1.00 48.93 C
ATOM 7 C4' U B 11 12.456 22.488 1.166 1.00 48.32 C
ATOM 8 O4' U B 11 11.213 23.216 1.220 1.00 48.32 O
ATOM 9 C3' U B 11 12.730 22.320 -0.312 1.00 47.80 C
ATOM 10 O3' U B 11 13.641 21.271 -0.540 1.00 48.95 O
ATOM 11 C2' U B 11 11.346 22.040 -0.830 1.00 47.19 C
ATOM 12 O2' U B 11 10.921 20.725 -0.563 1.00 44.57 O
ATOM 13 C1' U B 11 10.556 23.073 -0.029 1.00 48.65 C
ATOM 14 N1 U B 11 10.516 24.408 -0.679 1.00 49.98 N
ATOM 15 C2 U B 11 9.543 24.685 -1.622 1.00 49.71 C
ATOM 16 O2 U B 11 8.679 23.895 -1.951 1.00 50.71 O
ATOM 17 N3 U B 11 9.601 25.946 -2.154 1.00 49.01 N
ATOM 18 C4 U B 11 10.527 26.924 -1.859 1.00 48.76 C
ATOM 19 O4 U B 11 10.463 28.000 -2.418 1.00 49.07 O
ATOM 20 C5 U B 11 11.518 26.566 -0.885 1.00 49.96 C
ATOM 21 C6 U B 11 11.477 25.349 -0.340 1.00 50.27 C
ATOM 22 P C B 12 14.602 21.442 -1.793 1.00 49.59 P
ATOM 23 OP1 C B 12 15.628 20.370 -1.930 1.00 46.96 O
ATOM 24 OP2 C B 12 15.001 22.858 -1.701 1.00 49.74 O
ATOM 25 O5' C B 12 13.512 21.277 -2.953 1.00 52.77 O
TER
Atoms:
C2: (10.620,23.926,-6.399)
OP1: (15.628,20.370,-1.930)
OP2: (15.001,22.858,-1.701)
C4: (11.755,25.645,-5.305)
O5': (13.512,21.277,-2.953)
C3': (12.828,20.449,-5.750)
C1': (10.783,21.585,-5.623)
O4': (10.965,20.920,-4.386)
C5': (12.889,19.992,-3.202)
P: (14.602,21.442,-1.793)
O2: (9.861,23.515,-7.283)
C4': (12.083,19.998,-4.494)
C2': (11.659,20.880,-6.633)
O2': (10.953,19.814,-7.232)
N1: (11.143,23.015,-5.486)
N3: (10.942,25.238,-6.277)
N4: (12.028,26.949,-5.230)
C6: (11.981,23.440,-4.487)
C5: (12.310,24.733,-4.360)
O3': (13.592,19.386,-6.294)
OP1: (15.628,20.370,-1.930)
OP2: (15.001,22.858,-1.701)
C4: (11.755,25.645,-5.305)
O5': (13.512,21.277,-2.953)
C3': (12.828,20.449,-5.750)
C1': (10.783,21.585,-5.623)
O4': (10.965,20.920,-4.386)
C5': (12.889,19.992,-3.202)
P: (14.602,21.442,-1.793)
O2: (9.861,23.515,-7.283)
C4': (12.083,19.998,-4.494)
C2': (11.659,20.880,-6.633)
O2': (10.953,19.814,-7.232)
N1: (11.143,23.015,-5.486)
N3: (10.942,25.238,-6.277)
N4: (12.028,26.949,-5.230)
C6: (11.981,23.440,-4.487)
C5: (12.310,24.733,-4.360)
O3': (13.592,19.386,-6.294)
C4: (10.527,26.924,-1.859)
N3: (9.601,25.946,-2.154)
OP1: (16.146,24.580,2.288)
OP2: (15.147,26.540,1.019)
C2: (9.543,24.685,-1.622)
C1': (10.556,23.073,-0.029)
C3': (12.730,22.320,-0.312)
O5': (13.925,24.403,1.216)
O4': (11.213,23.216,1.220)
C5': (13.519,23.244,1.923)
P: (14.974,25.371,1.887)
C4': (12.456,22.488,1.166)
C2': (11.346,22.040,-0.830)
O2': (10.921,20.725,-0.563)
N1: (10.516,24.408,-0.679)
O4: (10.463,28.000,-2.418)
O2: (8.679,23.895,-1.951)
C6: (11.477,25.349,-0.340)
C5: (11.518,26.566,-0.885)
O3': (13.641,21.271,-0.540)
N3: (9.601,25.946,-2.154)
OP1: (16.146,24.580,2.288)
OP2: (15.147,26.540,1.019)
C2: (9.543,24.685,-1.622)
C1': (10.556,23.073,-0.029)
C3': (12.730,22.320,-0.312)
O5': (13.925,24.403,1.216)
O4': (11.213,23.216,1.220)
C5': (13.519,23.244,1.923)
P: (14.974,25.371,1.887)
C4': (12.456,22.488,1.166)
C2': (11.346,22.040,-0.830)
O2': (10.921,20.725,-0.563)
N1: (10.516,24.408,-0.679)
O4: (10.463,28.000,-2.418)
O2: (8.679,23.895,-1.951)
C6: (11.477,25.349,-0.340)
C5: (11.518,26.566,-0.885)
O3': (13.641,21.271,-0.540)
Image (generated by PyMOL):