Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01423:01422
Extra
PDB:
ATOM 1 O3' U A1422 88.169 142.432 38.780 1.00 55.57 O
ATOM 2 P C A1423 88.396 140.942 38.231 1.00 55.86 P
ATOM 3 OP1 C A1423 87.134 140.554 37.545 1.00 56.85 O
ATOM 4 OP2 C A1423 88.920 140.108 39.335 1.00 53.57 O
ATOM 5 O5' C A1423 89.540 141.108 37.129 1.00 57.19 O
ATOM 6 C5' C A1423 89.306 141.895 35.935 1.00 57.40 C
ATOM 7 C4' C A1423 90.604 142.170 35.213 1.00 56.55 C
ATOM 8 O4' C A1423 91.459 143.006 36.033 1.00 56.71 O
ATOM 9 C3' C A1423 91.468 140.956 34.941 1.00 56.46 C
ATOM 10 O3' C A1423 91.025 140.210 33.831 1.00 55.54 O
ATOM 11 C2' C A1423 92.839 141.575 34.733 1.00 57.39 C
ATOM 12 O2' C A1423 93.033 142.156 33.462 1.00 58.67 O
ATOM 13 C1' C A1423 92.817 142.665 35.798 1.00 57.58 C
ATOM 14 N1 C A1423 93.402 142.158 37.044 1.00 59.02 N
ATOM 15 C2 C A1423 94.779 142.297 37.239 1.00 60.72 C
ATOM 16 O2 C A1423 95.452 142.876 36.373 1.00 62.88 O
ATOM 17 N3 C A1423 95.342 141.799 38.358 1.00 60.44 N
ATOM 18 C4 C A1423 94.584 141.188 39.266 1.00 60.74 C
ATOM 19 N4 C A1423 95.186 140.697 40.354 1.00 61.68 N
ATOM 20 C5 C A1423 93.176 141.047 39.101 1.00 60.53 C
ATOM 21 C6 C A1423 92.632 141.543 37.988 1.00 58.32 C
ATOM 22 P A A1424 91.170 138.620 33.858 1.00 54.56 P
ATOM 23 OP1 A A1424 90.426 138.085 32.690 1.00 54.60 O
ATOM 24 OP2 A A1424 90.829 138.156 35.228 1.00 55.58 O
ATOM 25 O5' A A1424 92.721 138.388 33.617 1.00 52.96 O
TER
ATOM 1 O3' C B1421 88.013 142.613 44.834 1.00 48.85 O
ATOM 2 P U B1422 88.268 141.529 43.676 1.00 48.62 P
ATOM 3 OP1 U B1422 86.925 140.968 43.380 1.00 50.08 O
ATOM 4 OP2 U B1422 89.390 140.613 44.051 1.00 46.85 O
ATOM 5 O5' U B1422 88.724 142.410 42.434 1.00 50.23 O
ATOM 6 C5' U B1422 87.813 143.328 41.811 1.00 50.87 C
ATOM 7 C4' U B1422 88.471 143.973 40.620 1.00 52.32 C
ATOM 8 O4' U B1422 89.569 144.811 41.058 1.00 52.00 O
ATOM 9 C3' U B1422 89.126 143.012 39.650 1.00 52.47 C
ATOM 10 O3' U B1422 88.169 142.432 38.780 1.00 55.57 O
ATOM 11 C2' U B1422 90.111 143.921 38.938 1.00 51.80 C
ATOM 12 O2' U B1422 89.469 144.796 38.040 1.00 52.95 O
ATOM 13 C1' U B1422 90.613 144.763 40.104 1.00 52.50 C
ATOM 14 N1 U B1422 91.797 144.188 40.754 1.00 54.21 N
ATOM 15 C2 U B1422 93.038 144.433 40.184 1.00 55.17 C
ATOM 16 O2 U B1422 93.187 145.057 39.149 1.00 55.56 O
ATOM 17 N3 U B1422 94.101 143.906 40.866 1.00 57.10 N
ATOM 18 C4 U B1422 94.055 143.156 42.022 1.00 58.90 C
ATOM 19 O4 U B1422 95.109 142.737 42.521 1.00 60.68 O
ATOM 20 C5 U B1422 92.733 142.925 42.530 1.00 58.91 C
ATOM 21 C6 U B1422 91.681 143.438 41.896 1.00 55.37 C
ATOM 22 P C B1423 88.396 140.942 38.231 1.00 55.86 P
ATOM 23 OP1 C B1423 87.134 140.554 37.545 1.00 56.85 O
ATOM 24 OP2 C B1423 88.920 140.108 39.335 1.00 53.57 O
ATOM 25 O5' C B1423 89.540 141.108 37.129 1.00 57.19 O
TER
ATOM 2 P C A1423 88.396 140.942 38.231 1.00 55.86 P
ATOM 3 OP1 C A1423 87.134 140.554 37.545 1.00 56.85 O
ATOM 4 OP2 C A1423 88.920 140.108 39.335 1.00 53.57 O
ATOM 5 O5' C A1423 89.540 141.108 37.129 1.00 57.19 O
ATOM 6 C5' C A1423 89.306 141.895 35.935 1.00 57.40 C
ATOM 7 C4' C A1423 90.604 142.170 35.213 1.00 56.55 C
ATOM 8 O4' C A1423 91.459 143.006 36.033 1.00 56.71 O
ATOM 9 C3' C A1423 91.468 140.956 34.941 1.00 56.46 C
ATOM 10 O3' C A1423 91.025 140.210 33.831 1.00 55.54 O
ATOM 11 C2' C A1423 92.839 141.575 34.733 1.00 57.39 C
ATOM 12 O2' C A1423 93.033 142.156 33.462 1.00 58.67 O
ATOM 13 C1' C A1423 92.817 142.665 35.798 1.00 57.58 C
ATOM 14 N1 C A1423 93.402 142.158 37.044 1.00 59.02 N
ATOM 15 C2 C A1423 94.779 142.297 37.239 1.00 60.72 C
ATOM 16 O2 C A1423 95.452 142.876 36.373 1.00 62.88 O
ATOM 17 N3 C A1423 95.342 141.799 38.358 1.00 60.44 N
ATOM 18 C4 C A1423 94.584 141.188 39.266 1.00 60.74 C
ATOM 19 N4 C A1423 95.186 140.697 40.354 1.00 61.68 N
ATOM 20 C5 C A1423 93.176 141.047 39.101 1.00 60.53 C
ATOM 21 C6 C A1423 92.632 141.543 37.988 1.00 58.32 C
ATOM 22 P A A1424 91.170 138.620 33.858 1.00 54.56 P
ATOM 23 OP1 A A1424 90.426 138.085 32.690 1.00 54.60 O
ATOM 24 OP2 A A1424 90.829 138.156 35.228 1.00 55.58 O
ATOM 25 O5' A A1424 92.721 138.388 33.617 1.00 52.96 O
TER
ATOM 1 O3' C B1421 88.013 142.613 44.834 1.00 48.85 O
ATOM 2 P U B1422 88.268 141.529 43.676 1.00 48.62 P
ATOM 3 OP1 U B1422 86.925 140.968 43.380 1.00 50.08 O
ATOM 4 OP2 U B1422 89.390 140.613 44.051 1.00 46.85 O
ATOM 5 O5' U B1422 88.724 142.410 42.434 1.00 50.23 O
ATOM 6 C5' U B1422 87.813 143.328 41.811 1.00 50.87 C
ATOM 7 C4' U B1422 88.471 143.973 40.620 1.00 52.32 C
ATOM 8 O4' U B1422 89.569 144.811 41.058 1.00 52.00 O
ATOM 9 C3' U B1422 89.126 143.012 39.650 1.00 52.47 C
ATOM 10 O3' U B1422 88.169 142.432 38.780 1.00 55.57 O
ATOM 11 C2' U B1422 90.111 143.921 38.938 1.00 51.80 C
ATOM 12 O2' U B1422 89.469 144.796 38.040 1.00 52.95 O
ATOM 13 C1' U B1422 90.613 144.763 40.104 1.00 52.50 C
ATOM 14 N1 U B1422 91.797 144.188 40.754 1.00 54.21 N
ATOM 15 C2 U B1422 93.038 144.433 40.184 1.00 55.17 C
ATOM 16 O2 U B1422 93.187 145.057 39.149 1.00 55.56 O
ATOM 17 N3 U B1422 94.101 143.906 40.866 1.00 57.10 N
ATOM 18 C4 U B1422 94.055 143.156 42.022 1.00 58.90 C
ATOM 19 O4 U B1422 95.109 142.737 42.521 1.00 60.68 O
ATOM 20 C5 U B1422 92.733 142.925 42.530 1.00 58.91 C
ATOM 21 C6 U B1422 91.681 143.438 41.896 1.00 55.37 C
ATOM 22 P C B1423 88.396 140.942 38.231 1.00 55.86 P
ATOM 23 OP1 C B1423 87.134 140.554 37.545 1.00 56.85 O
ATOM 24 OP2 C B1423 88.920 140.108 39.335 1.00 53.57 O
ATOM 25 O5' C B1423 89.540 141.108 37.129 1.00 57.19 O
TER
Atoms:
C2: (94.779,142.297,37.239)
OP1: (87.134,140.554,37.545)
OP2: (88.920,140.108,39.335)
C4: (94.584,141.188,39.266)
O5': (89.540,141.108,37.129)
C3': (91.468,140.956,34.941)
C1': (92.817,142.665,35.798)
O4': (91.459,143.006,36.033)
C5': (89.306,141.895,35.935)
P: (88.396,140.942,38.231)
O2: (95.452,142.876,36.373)
C4': (90.604,142.170,35.213)
C2': (92.839,141.575,34.733)
O2': (93.033,142.156,33.462)
N1: (93.402,142.158,37.044)
N3: (95.342,141.799,38.358)
N4: (95.186,140.697,40.354)
C6: (92.632,141.543,37.988)
C5: (93.176,141.047,39.101)
O3': (91.025,140.210,33.831)
OP1: (87.134,140.554,37.545)
OP2: (88.920,140.108,39.335)
C4: (94.584,141.188,39.266)
O5': (89.540,141.108,37.129)
C3': (91.468,140.956,34.941)
C1': (92.817,142.665,35.798)
O4': (91.459,143.006,36.033)
C5': (89.306,141.895,35.935)
P: (88.396,140.942,38.231)
O2: (95.452,142.876,36.373)
C4': (90.604,142.170,35.213)
C2': (92.839,141.575,34.733)
O2': (93.033,142.156,33.462)
N1: (93.402,142.158,37.044)
N3: (95.342,141.799,38.358)
N4: (95.186,140.697,40.354)
C6: (92.632,141.543,37.988)
C5: (93.176,141.047,39.101)
O3': (91.025,140.210,33.831)
C4: (94.055,143.156,42.022)
N3: (94.101,143.906,40.866)
OP1: (86.925,140.968,43.380)
OP2: (89.390,140.613,44.051)
C2: (93.038,144.433,40.184)
C1': (90.613,144.763,40.104)
C3': (89.126,143.012,39.650)
O5': (88.724,142.410,42.434)
O4': (89.569,144.811,41.058)
C5': (87.813,143.328,41.811)
P: (88.268,141.529,43.676)
C4': (88.471,143.973,40.620)
C2': (90.111,143.921,38.938)
O2': (89.469,144.796,38.040)
N1: (91.797,144.188,40.754)
O4: (95.109,142.737,42.521)
O2: (93.187,145.057,39.149)
C6: (91.681,143.438,41.896)
C5: (92.733,142.925,42.530)
O3': (88.169,142.432,38.780)
N3: (94.101,143.906,40.866)
OP1: (86.925,140.968,43.380)
OP2: (89.390,140.613,44.051)
C2: (93.038,144.433,40.184)
C1': (90.613,144.763,40.104)
C3': (89.126,143.012,39.650)
O5': (88.724,142.410,42.434)
O4': (89.569,144.811,41.058)
C5': (87.813,143.328,41.811)
P: (88.268,141.529,43.676)
C4': (88.471,143.973,40.620)
C2': (90.111,143.921,38.938)
O2': (89.469,144.796,38.040)
N1: (91.797,144.188,40.754)
O4: (95.109,142.737,42.521)
O2: (93.187,145.057,39.149)
C6: (91.681,143.438,41.896)
C5: (92.733,142.925,42.530)
O3': (88.169,142.432,38.780)
Image (generated by PyMOL):