Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01812:01813
Extra
PDB:
ATOM 1 O3' C A1811 116.975 118.078 65.410 1.00 38.75 O
ATOM 2 P C A1812 118.471 118.018 64.850 1.00 39.35 P
ATOM 3 OP1 C A1812 118.579 116.790 64.030 1.00 40.73 O
ATOM 4 OP2 C A1812 119.376 118.221 66.002 1.00 37.97 O
ATOM 5 O5' C A1812 118.574 119.272 63.871 1.00 40.21 O
ATOM 6 C5' C A1812 117.797 119.320 62.659 1.00 40.42 C
ATOM 7 C4' C A1812 117.702 120.737 62.145 1.00 40.60 C
ATOM 8 O4' C A1812 117.127 121.583 63.174 1.00 40.47 O
ATOM 9 C3' C A1812 119.015 121.430 61.811 1.00 42.20 C
ATOM 10 O3' C A1812 119.494 121.064 60.520 1.00 44.48 O
ATOM 11 C2' C A1812 118.612 122.896 61.863 1.00 41.21 C
ATOM 12 O2' C A1812 117.912 123.315 60.709 1.00 39.42 O
ATOM 13 C1' C A1812 117.662 122.894 63.060 1.00 39.20 C
ATOM 14 N1 C A1812 118.358 123.240 64.310 1.00 35.95 N
ATOM 15 C2 C A1812 118.485 124.591 64.651 1.00 35.85 C
ATOM 16 O2 C A1812 118.014 125.445 63.890 1.00 37.74 O
ATOM 17 N3 C A1812 119.118 124.932 65.794 1.00 33.91 N
ATOM 18 C4 C A1812 119.617 123.982 66.584 1.00 34.37 C
ATOM 19 N4 C A1812 120.223 124.361 67.704 1.00 35.46 N
ATOM 20 C5 C A1812 119.512 122.598 66.259 1.00 34.74 C
ATOM 21 C6 C A1812 118.878 122.274 65.125 1.00 34.62 C
ATOM 22 P G A1813 121.057 121.208 60.170 1.00 43.19 P
ATOM 23 OP1 G A1813 121.282 120.429 58.930 1.00 42.96 O
ATOM 24 OP2 G A1813 121.843 120.896 61.386 1.00 42.53 O
ATOM 25 O5' G A1813 121.249 122.754 59.838 1.00 42.31 O
TER
ATOM 1 O3' C B1812 119.494 121.064 60.520 1.00 44.48 O
ATOM 2 P G B1813 121.057 121.208 60.170 1.00 43.19 P
ATOM 3 OP1 G B1813 121.282 120.429 58.930 1.00 42.96 O
ATOM 4 OP2 G B1813 121.843 120.896 61.386 1.00 42.53 O
ATOM 5 O5' G B1813 121.249 122.754 59.838 1.00 42.31 O
ATOM 6 C5' G B1813 120.497 123.381 58.780 1.00 40.67 C
ATOM 7 C4' G B1813 121.419 124.140 57.851 1.00 39.51 C
ATOM 8 O4' G B1813 122.042 125.234 58.573 1.00 38.71 O
ATOM 9 C3' G B1813 122.562 123.329 57.245 1.00 40.54 C
ATOM 10 O3' G B1813 122.872 123.826 55.953 1.00 42.37 O
ATOM 11 C2' G B1813 123.721 123.653 58.178 1.00 39.91 C
ATOM 12 O2' G B1813 124.998 123.529 57.584 1.00 42.39 O
ATOM 13 C1' G B1813 123.444 125.119 58.473 1.00 37.88 C
ATOM 14 N9 G B1813 124.057 125.608 59.701 1.00 36.12 N
ATOM 15 C8 G B1813 124.730 124.880 60.648 1.00 34.39 C
ATOM 16 N7 G B1813 125.221 125.616 61.604 1.00 35.62 N
ATOM 17 C5 G B1813 124.840 126.907 61.273 1.00 35.63 C
ATOM 18 C6 G B1813 125.101 128.137 61.924 1.00 36.18 C
ATOM 19 O6 G B1813 125.757 128.340 62.952 1.00 35.11 O
ATOM 20 N1 G B1813 124.516 129.204 61.252 1.00 36.43 N
ATOM 21 C2 G B1813 123.776 129.100 60.101 1.00 37.23 C
ATOM 22 N2 G B1813 123.274 130.238 59.612 1.00 39.16 N
ATOM 23 N3 G B1813 123.542 127.964 59.478 1.00 37.38 N
ATOM 24 C4 G B1813 124.101 126.915 60.114 1.00 36.37 C
ATOM 25 P C B1814 121.854 123.577 54.744 1.00 45.08 P
ATOM 26 OP1 C B1814 121.226 122.246 54.957 1.00 44.40 O
ATOM 27 OP2 C B1814 122.511 123.875 53.452 1.00 46.79 O
ATOM 28 O5' C B1814 120.767 124.709 54.978 1.00 45.42 O
TER
ATOM 2 P C A1812 118.471 118.018 64.850 1.00 39.35 P
ATOM 3 OP1 C A1812 118.579 116.790 64.030 1.00 40.73 O
ATOM 4 OP2 C A1812 119.376 118.221 66.002 1.00 37.97 O
ATOM 5 O5' C A1812 118.574 119.272 63.871 1.00 40.21 O
ATOM 6 C5' C A1812 117.797 119.320 62.659 1.00 40.42 C
ATOM 7 C4' C A1812 117.702 120.737 62.145 1.00 40.60 C
ATOM 8 O4' C A1812 117.127 121.583 63.174 1.00 40.47 O
ATOM 9 C3' C A1812 119.015 121.430 61.811 1.00 42.20 C
ATOM 10 O3' C A1812 119.494 121.064 60.520 1.00 44.48 O
ATOM 11 C2' C A1812 118.612 122.896 61.863 1.00 41.21 C
ATOM 12 O2' C A1812 117.912 123.315 60.709 1.00 39.42 O
ATOM 13 C1' C A1812 117.662 122.894 63.060 1.00 39.20 C
ATOM 14 N1 C A1812 118.358 123.240 64.310 1.00 35.95 N
ATOM 15 C2 C A1812 118.485 124.591 64.651 1.00 35.85 C
ATOM 16 O2 C A1812 118.014 125.445 63.890 1.00 37.74 O
ATOM 17 N3 C A1812 119.118 124.932 65.794 1.00 33.91 N
ATOM 18 C4 C A1812 119.617 123.982 66.584 1.00 34.37 C
ATOM 19 N4 C A1812 120.223 124.361 67.704 1.00 35.46 N
ATOM 20 C5 C A1812 119.512 122.598 66.259 1.00 34.74 C
ATOM 21 C6 C A1812 118.878 122.274 65.125 1.00 34.62 C
ATOM 22 P G A1813 121.057 121.208 60.170 1.00 43.19 P
ATOM 23 OP1 G A1813 121.282 120.429 58.930 1.00 42.96 O
ATOM 24 OP2 G A1813 121.843 120.896 61.386 1.00 42.53 O
ATOM 25 O5' G A1813 121.249 122.754 59.838 1.00 42.31 O
TER
ATOM 1 O3' C B1812 119.494 121.064 60.520 1.00 44.48 O
ATOM 2 P G B1813 121.057 121.208 60.170 1.00 43.19 P
ATOM 3 OP1 G B1813 121.282 120.429 58.930 1.00 42.96 O
ATOM 4 OP2 G B1813 121.843 120.896 61.386 1.00 42.53 O
ATOM 5 O5' G B1813 121.249 122.754 59.838 1.00 42.31 O
ATOM 6 C5' G B1813 120.497 123.381 58.780 1.00 40.67 C
ATOM 7 C4' G B1813 121.419 124.140 57.851 1.00 39.51 C
ATOM 8 O4' G B1813 122.042 125.234 58.573 1.00 38.71 O
ATOM 9 C3' G B1813 122.562 123.329 57.245 1.00 40.54 C
ATOM 10 O3' G B1813 122.872 123.826 55.953 1.00 42.37 O
ATOM 11 C2' G B1813 123.721 123.653 58.178 1.00 39.91 C
ATOM 12 O2' G B1813 124.998 123.529 57.584 1.00 42.39 O
ATOM 13 C1' G B1813 123.444 125.119 58.473 1.00 37.88 C
ATOM 14 N9 G B1813 124.057 125.608 59.701 1.00 36.12 N
ATOM 15 C8 G B1813 124.730 124.880 60.648 1.00 34.39 C
ATOM 16 N7 G B1813 125.221 125.616 61.604 1.00 35.62 N
ATOM 17 C5 G B1813 124.840 126.907 61.273 1.00 35.63 C
ATOM 18 C6 G B1813 125.101 128.137 61.924 1.00 36.18 C
ATOM 19 O6 G B1813 125.757 128.340 62.952 1.00 35.11 O
ATOM 20 N1 G B1813 124.516 129.204 61.252 1.00 36.43 N
ATOM 21 C2 G B1813 123.776 129.100 60.101 1.00 37.23 C
ATOM 22 N2 G B1813 123.274 130.238 59.612 1.00 39.16 N
ATOM 23 N3 G B1813 123.542 127.964 59.478 1.00 37.38 N
ATOM 24 C4 G B1813 124.101 126.915 60.114 1.00 36.37 C
ATOM 25 P C B1814 121.854 123.577 54.744 1.00 45.08 P
ATOM 26 OP1 C B1814 121.226 122.246 54.957 1.00 44.40 O
ATOM 27 OP2 C B1814 122.511 123.875 53.452 1.00 46.79 O
ATOM 28 O5' C B1814 120.767 124.709 54.978 1.00 45.42 O
TER
Atoms:
C2: (118.485,124.591,64.651)
OP1: (118.579,116.790,64.030)
OP2: (119.376,118.221,66.002)
C4: (119.617,123.982,66.584)
O5': (118.574,119.272,63.871)
C3': (119.015,121.430,61.811)
C1': (117.662,122.894,63.060)
O4': (117.127,121.583,63.174)
C5': (117.797,119.320,62.659)
P: (118.471,118.018,64.850)
O2: (118.014,125.445,63.890)
C4': (117.702,120.737,62.145)
C2': (118.612,122.896,61.863)
O2': (117.912,123.315,60.709)
N1: (118.358,123.240,64.310)
N3: (119.118,124.932,65.794)
N4: (120.223,124.361,67.704)
C6: (118.878,122.274,65.125)
C5: (119.512,122.598,66.259)
O3': (119.494,121.064,60.520)
OP1: (118.579,116.790,64.030)
OP2: (119.376,118.221,66.002)
C4: (119.617,123.982,66.584)
O5': (118.574,119.272,63.871)
C3': (119.015,121.430,61.811)
C1': (117.662,122.894,63.060)
O4': (117.127,121.583,63.174)
C5': (117.797,119.320,62.659)
P: (118.471,118.018,64.850)
O2: (118.014,125.445,63.890)
C4': (117.702,120.737,62.145)
C2': (118.612,122.896,61.863)
O2': (117.912,123.315,60.709)
N1: (118.358,123.240,64.310)
N3: (119.118,124.932,65.794)
N4: (120.223,124.361,67.704)
C6: (118.878,122.274,65.125)
C5: (119.512,122.598,66.259)
O3': (119.494,121.064,60.520)
OP1: (121.282,120.429,58.930)
OP2: (121.843,120.896,61.386)
C3': (122.562,123.329,57.245)
C1': (123.444,125.119,58.473)
C5': (120.497,123.381,58.780)
O6: (125.757,128.340,62.952)
O4': (122.042,125.234,58.573)
C8: (124.730,124.880,60.648)
C2: (123.776,129.100,60.101)
C6: (125.101,128.137,61.924)
C5: (124.840,126.907,61.273)
C4: (124.101,126.915,60.114)
P: (121.057,121.208,60.170)
C4': (121.419,124.140,57.851)
C2': (123.721,123.653,58.178)
O2': (124.998,123.529,57.584)
N1: (124.516,129.204,61.252)
N2: (123.274,130.238,59.612)
N3: (123.542,127.964,59.478)
N7: (125.221,125.616,61.604)
N9: (124.057,125.608,59.701)
O5': (121.249,122.754,59.838)
O3': (122.872,123.826,55.953)
OP2: (121.843,120.896,61.386)
C3': (122.562,123.329,57.245)
C1': (123.444,125.119,58.473)
C5': (120.497,123.381,58.780)
O6: (125.757,128.340,62.952)
O4': (122.042,125.234,58.573)
C8: (124.730,124.880,60.648)
C2: (123.776,129.100,60.101)
C6: (125.101,128.137,61.924)
C5: (124.840,126.907,61.273)
C4: (124.101,126.915,60.114)
P: (121.057,121.208,60.170)
C4': (121.419,124.140,57.851)
C2': (123.721,123.653,58.178)
O2': (124.998,123.529,57.584)
N1: (124.516,129.204,61.252)
N2: (123.274,130.238,59.612)
N3: (123.542,127.964,59.478)
N7: (125.221,125.616,61.604)
N9: (124.057,125.608,59.701)
O5': (121.249,122.754,59.838)
O3': (122.872,123.826,55.953)
Image (generated by PyMOL):