Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:076:077
Extra
PDB:
ATOM 1 O3' C A 75 39.283 152.915 42.684 1.00 76.34 O
ATOM 2 P A A 76 38.265 153.640 43.706 1.00 79.38 P
ATOM 3 OP1 A A 76 38.814 153.521 45.084 1.00 80.21 O
ATOM 4 OP2 A A 76 36.904 153.128 43.421 1.00 79.79 O
ATOM 5 O5' A A 76 38.290 155.179 43.294 1.00 79.14 O
ATOM 6 C5' A A 76 37.334 156.113 43.850 1.00 79.30 C
ATOM 7 C4' A A 76 37.858 157.529 43.739 1.00 80.12 C
ATOM 8 O4' A A 76 38.908 157.751 44.724 1.00 78.67 O
ATOM 9 C3' A A 76 38.471 157.885 42.386 1.00 81.46 C
ATOM 10 O3' A A 76 38.277 159.269 42.122 1.00 85.01 O
ATOM 11 C2' A A 76 39.955 157.641 42.631 1.00 80.25 C
ATOM 12 O2' A A 76 40.792 158.357 41.746 1.00 80.78 O
ATOM 13 C1' A A 76 40.094 158.153 44.064 1.00 78.33 C
ATOM 14 N9 A A 76 41.247 157.634 44.801 1.00 76.32 N
ATOM 15 C8 A A 76 41.432 156.389 45.351 1.00 75.13 C
ATOM 16 N7 A A 76 42.579 156.251 45.970 1.00 75.07 N
ATOM 17 C5 A A 76 43.192 157.486 45.816 1.00 74.95 C
ATOM 18 C6 A A 76 44.429 157.992 46.252 1.00 74.65 C
ATOM 19 N6 A A 76 45.307 157.291 46.975 1.00 74.19 N
ATOM 20 N1 A A 76 44.736 159.263 45.921 1.00 74.97 N
ATOM 21 C2 A A 76 43.857 159.971 45.207 1.00 74.75 C
ATOM 22 N3 A A 76 42.665 159.612 44.747 1.00 74.59 N
ATOM 23 C4 A A 76 42.388 158.344 45.090 1.00 75.28 C
ATOM 24 P C A 77 37.102 159.739 41.138 1.00 87.10 P
ATOM 25 OP1 C A 77 36.704 158.593 40.272 1.00 86.81 O
ATOM 26 OP2 C A 77 37.535 161.022 40.508 1.00 85.07 O
ATOM 27 O5' C A 77 35.899 160.048 42.133 1.00 88.32 O
TER
ATOM 1 O3' A B 76 38.277 159.269 42.122 1.00 85.01 O
ATOM 2 P C B 77 37.102 159.739 41.138 1.00 87.10 P
ATOM 3 OP1 C B 77 36.704 158.593 40.272 1.00 86.81 O
ATOM 4 OP2 C B 77 37.535 161.022 40.508 1.00 85.07 O
ATOM 5 O5' C B 77 35.899 160.048 42.133 1.00 88.32 O
ATOM 6 C5' C B 77 34.704 160.646 41.634 1.00 92.30 C
ATOM 7 C4' C B 77 33.667 160.769 42.718 1.00 93.77 C
ATOM 8 O4' C B 77 33.329 159.451 43.232 1.00 95.75 O
ATOM 9 C3' C B 77 34.005 161.621 43.944 1.00 93.65 C
ATOM 10 O3' C B 77 32.907 162.502 44.169 1.00 91.25 O
ATOM 11 C2' C B 77 34.068 160.583 45.072 1.00 95.52 C
ATOM 12 O2' C B 77 33.707 161.083 46.345 1.00 95.20 O
ATOM 13 C1' C B 77 33.021 159.586 44.595 1.00 97.56 C
ATOM 14 N1 C B 77 32.992 158.253 45.233 1.00100.65 N
ATOM 15 C2 C B 77 31.737 157.645 45.454 1.00101.96 C
ATOM 16 O2 C B 77 30.698 158.241 45.096 1.00101.55 O
ATOM 17 N3 C B 77 31.688 156.430 46.054 1.00103.23 N
ATOM 18 C4 C B 77 32.817 155.824 46.431 1.00103.48 C
ATOM 19 N4 C B 77 32.713 154.634 47.034 1.00103.38 N
ATOM 20 C5 C B 77 34.103 156.413 46.210 1.00102.86 C
ATOM 21 C6 C B 77 34.143 157.614 45.612 1.00101.50 C
ATOM 22 P G B 78 32.884 163.941 43.450 1.00 89.32 P
ATOM 23 OP1 G B 78 31.477 164.227 43.062 1.00 89.35 O
ATOM 24 OP2 G B 78 33.957 163.941 42.409 1.00 88.09 O
ATOM 25 O5' G B 78 33.290 164.960 44.603 1.00 87.24 O
TER
ATOM 2 P A A 76 38.265 153.640 43.706 1.00 79.38 P
ATOM 3 OP1 A A 76 38.814 153.521 45.084 1.00 80.21 O
ATOM 4 OP2 A A 76 36.904 153.128 43.421 1.00 79.79 O
ATOM 5 O5' A A 76 38.290 155.179 43.294 1.00 79.14 O
ATOM 6 C5' A A 76 37.334 156.113 43.850 1.00 79.30 C
ATOM 7 C4' A A 76 37.858 157.529 43.739 1.00 80.12 C
ATOM 8 O4' A A 76 38.908 157.751 44.724 1.00 78.67 O
ATOM 9 C3' A A 76 38.471 157.885 42.386 1.00 81.46 C
ATOM 10 O3' A A 76 38.277 159.269 42.122 1.00 85.01 O
ATOM 11 C2' A A 76 39.955 157.641 42.631 1.00 80.25 C
ATOM 12 O2' A A 76 40.792 158.357 41.746 1.00 80.78 O
ATOM 13 C1' A A 76 40.094 158.153 44.064 1.00 78.33 C
ATOM 14 N9 A A 76 41.247 157.634 44.801 1.00 76.32 N
ATOM 15 C8 A A 76 41.432 156.389 45.351 1.00 75.13 C
ATOM 16 N7 A A 76 42.579 156.251 45.970 1.00 75.07 N
ATOM 17 C5 A A 76 43.192 157.486 45.816 1.00 74.95 C
ATOM 18 C6 A A 76 44.429 157.992 46.252 1.00 74.65 C
ATOM 19 N6 A A 76 45.307 157.291 46.975 1.00 74.19 N
ATOM 20 N1 A A 76 44.736 159.263 45.921 1.00 74.97 N
ATOM 21 C2 A A 76 43.857 159.971 45.207 1.00 74.75 C
ATOM 22 N3 A A 76 42.665 159.612 44.747 1.00 74.59 N
ATOM 23 C4 A A 76 42.388 158.344 45.090 1.00 75.28 C
ATOM 24 P C A 77 37.102 159.739 41.138 1.00 87.10 P
ATOM 25 OP1 C A 77 36.704 158.593 40.272 1.00 86.81 O
ATOM 26 OP2 C A 77 37.535 161.022 40.508 1.00 85.07 O
ATOM 27 O5' C A 77 35.899 160.048 42.133 1.00 88.32 O
TER
ATOM 1 O3' A B 76 38.277 159.269 42.122 1.00 85.01 O
ATOM 2 P C B 77 37.102 159.739 41.138 1.00 87.10 P
ATOM 3 OP1 C B 77 36.704 158.593 40.272 1.00 86.81 O
ATOM 4 OP2 C B 77 37.535 161.022 40.508 1.00 85.07 O
ATOM 5 O5' C B 77 35.899 160.048 42.133 1.00 88.32 O
ATOM 6 C5' C B 77 34.704 160.646 41.634 1.00 92.30 C
ATOM 7 C4' C B 77 33.667 160.769 42.718 1.00 93.77 C
ATOM 8 O4' C B 77 33.329 159.451 43.232 1.00 95.75 O
ATOM 9 C3' C B 77 34.005 161.621 43.944 1.00 93.65 C
ATOM 10 O3' C B 77 32.907 162.502 44.169 1.00 91.25 O
ATOM 11 C2' C B 77 34.068 160.583 45.072 1.00 95.52 C
ATOM 12 O2' C B 77 33.707 161.083 46.345 1.00 95.20 O
ATOM 13 C1' C B 77 33.021 159.586 44.595 1.00 97.56 C
ATOM 14 N1 C B 77 32.992 158.253 45.233 1.00100.65 N
ATOM 15 C2 C B 77 31.737 157.645 45.454 1.00101.96 C
ATOM 16 O2 C B 77 30.698 158.241 45.096 1.00101.55 O
ATOM 17 N3 C B 77 31.688 156.430 46.054 1.00103.23 N
ATOM 18 C4 C B 77 32.817 155.824 46.431 1.00103.48 C
ATOM 19 N4 C B 77 32.713 154.634 47.034 1.00103.38 N
ATOM 20 C5 C B 77 34.103 156.413 46.210 1.00102.86 C
ATOM 21 C6 C B 77 34.143 157.614 45.612 1.00101.50 C
ATOM 22 P G B 78 32.884 163.941 43.450 1.00 89.32 P
ATOM 23 OP1 G B 78 31.477 164.227 43.062 1.00 89.35 O
ATOM 24 OP2 G B 78 33.957 163.941 42.409 1.00 88.09 O
ATOM 25 O5' G B 78 33.290 164.960 44.603 1.00 87.24 O
TER
Atoms:
OP1: (38.814,153.521,45.084)
OP2: (36.904,153.128,43.421)
C3': (38.471,157.885,42.386)
C1': (40.094,158.153,44.064)
C5': (37.334,156.113,43.850)
O4': (38.908,157.751,44.724)
C8: (41.432,156.389,45.351)
O2': (40.792,158.357,41.746)
C6: (44.429,157.992,46.252)
C5: (43.192,157.486,45.816)
C4: (42.388,158.344,45.090)
P: (38.265,153.640,43.706)
C4': (37.858,157.529,43.739)
C2': (39.955,157.641,42.631)
C2: (43.857,159.971,45.207)
N1: (44.736,159.263,45.921)
N3: (42.665,159.612,44.747)
N6: (45.307,157.291,46.975)
N7: (42.579,156.251,45.970)
N9: (41.247,157.634,44.801)
O5': (38.290,155.179,43.294)
O3': (38.277,159.269,42.122)
OP2: (36.904,153.128,43.421)
C3': (38.471,157.885,42.386)
C1': (40.094,158.153,44.064)
C5': (37.334,156.113,43.850)
O4': (38.908,157.751,44.724)
C8: (41.432,156.389,45.351)
O2': (40.792,158.357,41.746)
C6: (44.429,157.992,46.252)
C5: (43.192,157.486,45.816)
C4: (42.388,158.344,45.090)
P: (38.265,153.640,43.706)
C4': (37.858,157.529,43.739)
C2': (39.955,157.641,42.631)
C2: (43.857,159.971,45.207)
N1: (44.736,159.263,45.921)
N3: (42.665,159.612,44.747)
N6: (45.307,157.291,46.975)
N7: (42.579,156.251,45.970)
N9: (41.247,157.634,44.801)
O5': (38.290,155.179,43.294)
O3': (38.277,159.269,42.122)
C2: (31.737,157.645,45.454)
OP1: (36.704,158.593,40.272)
OP2: (37.535,161.022,40.508)
C4: (32.817,155.824,46.431)
O5': (35.899,160.048,42.133)
C3': (34.005,161.621,43.944)
C1': (33.021,159.586,44.595)
O4': (33.329,159.451,43.232)
C5': (34.704,160.646,41.634)
P: (37.102,159.739,41.138)
O2: (30.698,158.241,45.096)
C4': (33.667,160.769,42.718)
C2': (34.068,160.583,45.072)
O2': (33.707,161.083,46.345)
N1: (32.992,158.253,45.233)
N3: (31.688,156.430,46.054)
N4: (32.713,154.634,47.034)
C6: (34.143,157.614,45.612)
C5: (34.103,156.413,46.210)
O3': (32.907,162.502,44.169)
OP1: (36.704,158.593,40.272)
OP2: (37.535,161.022,40.508)
C4: (32.817,155.824,46.431)
O5': (35.899,160.048,42.133)
C3': (34.005,161.621,43.944)
C1': (33.021,159.586,44.595)
O4': (33.329,159.451,43.232)
C5': (34.704,160.646,41.634)
P: (37.102,159.739,41.138)
O2: (30.698,158.241,45.096)
C4': (33.667,160.769,42.718)
C2': (34.068,160.583,45.072)
O2': (33.707,161.083,46.345)
N1: (32.992,158.253,45.233)
N3: (31.688,156.430,46.054)
N4: (32.713,154.634,47.034)
C6: (34.143,157.614,45.612)
C5: (34.103,156.413,46.210)
O3': (32.907,162.502,44.169)
Image (generated by PyMOL):