Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01812:01813
Extra
PDB:
ATOM 1 O3' C A1811 117.260 118.459 65.809 1.00 46.32 O
ATOM 2 P C A1812 118.789 118.363 65.343 1.00 46.53 P
ATOM 3 OP1 C A1812 118.907 117.093 64.581 1.00 47.05 O
ATOM 4 OP2 C A1812 119.652 118.595 66.531 1.00 45.55 O
ATOM 5 O5' C A1812 118.960 119.589 64.342 1.00 45.04 O
ATOM 6 C5' C A1812 118.206 119.644 63.120 1.00 44.74 C
ATOM 7 C4' C A1812 118.019 121.075 62.676 1.00 45.24 C
ATOM 8 O4' C A1812 117.527 121.854 63.800 1.00 44.96 O
ATOM 9 C3' C A1812 119.261 121.846 62.260 1.00 46.84 C
ATOM 10 O3' C A1812 119.684 121.536 60.932 1.00 51.32 O
ATOM 11 C2' C A1812 118.775 123.285 62.383 1.00 45.24 C
ATOM 12 O2' C A1812 117.924 123.674 61.322 1.00 43.98 O
ATOM 13 C1' C A1812 117.951 123.203 63.666 1.00 42.04 C
ATOM 14 N1 C A1812 118.717 123.588 64.862 1.00 38.14 N
ATOM 15 C2 C A1812 118.891 124.954 65.140 1.00 37.00 C
ATOM 16 O2 C A1812 118.427 125.784 64.360 1.00 37.04 O
ATOM 17 N3 C A1812 119.564 125.327 66.248 1.00 35.59 N
ATOM 18 C4 C A1812 120.061 124.397 67.067 1.00 37.70 C
ATOM 19 N4 C A1812 120.692 124.808 68.171 1.00 37.18 N
ATOM 20 C5 C A1812 119.924 122.999 66.797 1.00 37.24 C
ATOM 21 C6 C A1812 119.249 122.643 65.695 1.00 37.41 C
ATOM 22 P G A1813 121.256 121.565 60.565 1.00 53.53 P
ATOM 23 OP1 G A1813 121.417 120.843 59.284 1.00 51.19 O
ATOM 24 OP2 G A1813 122.004 121.096 61.764 1.00 50.90 O
ATOM 25 O5' G A1813 121.565 123.107 60.293 1.00 50.84 O
TER
ATOM 1 O3' C B1812 119.684 121.536 60.932 1.00 51.32 O
ATOM 2 P G B1813 121.256 121.565 60.565 1.00 53.53 P
ATOM 3 OP1 G B1813 121.417 120.843 59.284 1.00 51.19 O
ATOM 4 OP2 G B1813 122.004 121.096 61.764 1.00 50.90 O
ATOM 5 O5' G B1813 121.565 123.107 60.293 1.00 50.84 O
ATOM 6 C5' G B1813 120.813 123.835 59.297 1.00 51.76 C
ATOM 7 C4' G B1813 121.740 124.543 58.335 1.00 51.55 C
ATOM 8 O4' G B1813 122.418 125.621 59.023 1.00 52.83 O
ATOM 9 C3' G B1813 122.841 123.694 57.711 1.00 53.22 C
ATOM 10 O3' G B1813 123.177 124.232 56.438 1.00 55.85 O
ATOM 11 C2' G B1813 124.011 123.958 58.646 1.00 52.04 C
ATOM 12 O2' G B1813 125.259 123.756 58.025 1.00 55.09 O
ATOM 13 C1' G B1813 123.813 125.442 58.920 1.00 50.27 C
ATOM 14 N9 G B1813 124.432 125.963 60.130 1.00 47.96 N
ATOM 15 C8 G B1813 125.128 125.272 61.087 1.00 48.04 C
ATOM 16 N7 G B1813 125.568 126.037 62.048 1.00 48.56 N
ATOM 17 C5 G B1813 125.136 127.307 61.703 1.00 48.76 C
ATOM 18 C6 G B1813 125.316 128.552 62.359 1.00 49.99 C
ATOM 19 O6 G B1813 125.926 128.792 63.409 1.00 51.74 O
ATOM 20 N1 G B1813 124.696 129.588 61.667 1.00 50.10 N
ATOM 21 C2 G B1813 123.995 129.445 60.496 1.00 49.96 C
ATOM 22 N2 G B1813 123.448 130.558 59.988 1.00 50.73 N
ATOM 23 N3 G B1813 123.835 128.296 59.871 1.00 50.25 N
ATOM 24 C4 G B1813 124.427 127.276 60.526 1.00 48.93 C
ATOM 25 P C B1814 122.177 124.036 55.200 1.00 59.80 P
ATOM 26 OP1 C B1814 121.588 122.671 55.306 1.00 58.47 O
ATOM 27 OP2 C B1814 122.880 124.434 53.949 1.00 58.96 O
ATOM 28 O5' C B1814 121.030 125.105 55.484 1.00 58.55 O
TER
ATOM 2 P C A1812 118.789 118.363 65.343 1.00 46.53 P
ATOM 3 OP1 C A1812 118.907 117.093 64.581 1.00 47.05 O
ATOM 4 OP2 C A1812 119.652 118.595 66.531 1.00 45.55 O
ATOM 5 O5' C A1812 118.960 119.589 64.342 1.00 45.04 O
ATOM 6 C5' C A1812 118.206 119.644 63.120 1.00 44.74 C
ATOM 7 C4' C A1812 118.019 121.075 62.676 1.00 45.24 C
ATOM 8 O4' C A1812 117.527 121.854 63.800 1.00 44.96 O
ATOM 9 C3' C A1812 119.261 121.846 62.260 1.00 46.84 C
ATOM 10 O3' C A1812 119.684 121.536 60.932 1.00 51.32 O
ATOM 11 C2' C A1812 118.775 123.285 62.383 1.00 45.24 C
ATOM 12 O2' C A1812 117.924 123.674 61.322 1.00 43.98 O
ATOM 13 C1' C A1812 117.951 123.203 63.666 1.00 42.04 C
ATOM 14 N1 C A1812 118.717 123.588 64.862 1.00 38.14 N
ATOM 15 C2 C A1812 118.891 124.954 65.140 1.00 37.00 C
ATOM 16 O2 C A1812 118.427 125.784 64.360 1.00 37.04 O
ATOM 17 N3 C A1812 119.564 125.327 66.248 1.00 35.59 N
ATOM 18 C4 C A1812 120.061 124.397 67.067 1.00 37.70 C
ATOM 19 N4 C A1812 120.692 124.808 68.171 1.00 37.18 N
ATOM 20 C5 C A1812 119.924 122.999 66.797 1.00 37.24 C
ATOM 21 C6 C A1812 119.249 122.643 65.695 1.00 37.41 C
ATOM 22 P G A1813 121.256 121.565 60.565 1.00 53.53 P
ATOM 23 OP1 G A1813 121.417 120.843 59.284 1.00 51.19 O
ATOM 24 OP2 G A1813 122.004 121.096 61.764 1.00 50.90 O
ATOM 25 O5' G A1813 121.565 123.107 60.293 1.00 50.84 O
TER
ATOM 1 O3' C B1812 119.684 121.536 60.932 1.00 51.32 O
ATOM 2 P G B1813 121.256 121.565 60.565 1.00 53.53 P
ATOM 3 OP1 G B1813 121.417 120.843 59.284 1.00 51.19 O
ATOM 4 OP2 G B1813 122.004 121.096 61.764 1.00 50.90 O
ATOM 5 O5' G B1813 121.565 123.107 60.293 1.00 50.84 O
ATOM 6 C5' G B1813 120.813 123.835 59.297 1.00 51.76 C
ATOM 7 C4' G B1813 121.740 124.543 58.335 1.00 51.55 C
ATOM 8 O4' G B1813 122.418 125.621 59.023 1.00 52.83 O
ATOM 9 C3' G B1813 122.841 123.694 57.711 1.00 53.22 C
ATOM 10 O3' G B1813 123.177 124.232 56.438 1.00 55.85 O
ATOM 11 C2' G B1813 124.011 123.958 58.646 1.00 52.04 C
ATOM 12 O2' G B1813 125.259 123.756 58.025 1.00 55.09 O
ATOM 13 C1' G B1813 123.813 125.442 58.920 1.00 50.27 C
ATOM 14 N9 G B1813 124.432 125.963 60.130 1.00 47.96 N
ATOM 15 C8 G B1813 125.128 125.272 61.087 1.00 48.04 C
ATOM 16 N7 G B1813 125.568 126.037 62.048 1.00 48.56 N
ATOM 17 C5 G B1813 125.136 127.307 61.703 1.00 48.76 C
ATOM 18 C6 G B1813 125.316 128.552 62.359 1.00 49.99 C
ATOM 19 O6 G B1813 125.926 128.792 63.409 1.00 51.74 O
ATOM 20 N1 G B1813 124.696 129.588 61.667 1.00 50.10 N
ATOM 21 C2 G B1813 123.995 129.445 60.496 1.00 49.96 C
ATOM 22 N2 G B1813 123.448 130.558 59.988 1.00 50.73 N
ATOM 23 N3 G B1813 123.835 128.296 59.871 1.00 50.25 N
ATOM 24 C4 G B1813 124.427 127.276 60.526 1.00 48.93 C
ATOM 25 P C B1814 122.177 124.036 55.200 1.00 59.80 P
ATOM 26 OP1 C B1814 121.588 122.671 55.306 1.00 58.47 O
ATOM 27 OP2 C B1814 122.880 124.434 53.949 1.00 58.96 O
ATOM 28 O5' C B1814 121.030 125.105 55.484 1.00 58.55 O
TER
Atoms:
C2: (118.891,124.954,65.140)
OP1: (118.907,117.093,64.581)
OP2: (119.652,118.595,66.531)
C4: (120.061,124.397,67.067)
O5': (118.960,119.589,64.342)
C3': (119.261,121.846,62.260)
C1': (117.951,123.203,63.666)
O4': (117.527,121.854,63.800)
C5': (118.206,119.644,63.120)
P: (118.789,118.363,65.343)
O2: (118.427,125.784,64.360)
C4': (118.019,121.075,62.676)
C2': (118.775,123.285,62.383)
O2': (117.924,123.674,61.322)
N1: (118.717,123.588,64.862)
N3: (119.564,125.327,66.248)
N4: (120.692,124.808,68.171)
C6: (119.249,122.643,65.695)
C5: (119.924,122.999,66.797)
O3': (119.684,121.536,60.932)
OP1: (118.907,117.093,64.581)
OP2: (119.652,118.595,66.531)
C4: (120.061,124.397,67.067)
O5': (118.960,119.589,64.342)
C3': (119.261,121.846,62.260)
C1': (117.951,123.203,63.666)
O4': (117.527,121.854,63.800)
C5': (118.206,119.644,63.120)
P: (118.789,118.363,65.343)
O2: (118.427,125.784,64.360)
C4': (118.019,121.075,62.676)
C2': (118.775,123.285,62.383)
O2': (117.924,123.674,61.322)
N1: (118.717,123.588,64.862)
N3: (119.564,125.327,66.248)
N4: (120.692,124.808,68.171)
C6: (119.249,122.643,65.695)
C5: (119.924,122.999,66.797)
O3': (119.684,121.536,60.932)
OP1: (121.417,120.843,59.284)
OP2: (122.004,121.096,61.764)
C3': (122.841,123.694,57.711)
C1': (123.813,125.442,58.920)
C5': (120.813,123.835,59.297)
O6: (125.926,128.792,63.409)
O4': (122.418,125.621,59.023)
C8: (125.128,125.272,61.087)
C2: (123.995,129.445,60.496)
C6: (125.316,128.552,62.359)
C5: (125.136,127.307,61.703)
C4: (124.427,127.276,60.526)
P: (121.256,121.565,60.565)
C4': (121.740,124.543,58.335)
C2': (124.011,123.958,58.646)
O2': (125.259,123.756,58.025)
N1: (124.696,129.588,61.667)
N2: (123.448,130.558,59.988)
N3: (123.835,128.296,59.871)
N7: (125.568,126.037,62.048)
N9: (124.432,125.963,60.130)
O5': (121.565,123.107,60.293)
O3': (123.177,124.232,56.438)
OP2: (122.004,121.096,61.764)
C3': (122.841,123.694,57.711)
C1': (123.813,125.442,58.920)
C5': (120.813,123.835,59.297)
O6: (125.926,128.792,63.409)
O4': (122.418,125.621,59.023)
C8: (125.128,125.272,61.087)
C2: (123.995,129.445,60.496)
C6: (125.316,128.552,62.359)
C5: (125.136,127.307,61.703)
C4: (124.427,127.276,60.526)
P: (121.256,121.565,60.565)
C4': (121.740,124.543,58.335)
C2': (124.011,123.958,58.646)
O2': (125.259,123.756,58.025)
N1: (124.696,129.588,61.667)
N2: (123.448,130.558,59.988)
N3: (123.835,128.296,59.871)
N7: (125.568,126.037,62.048)
N9: (124.432,125.963,60.130)
O5': (121.565,123.107,60.293)
O3': (123.177,124.232,56.438)
Image (generated by PyMOL):