ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1G:A346:A358

Extra

PDB:
ATOM 1 O3' C A 345 -71.755 3.805 -77.382 1.00 87.16 O
ATOM 2 P A A 346 -73.235 3.856 -76.784 1.00 96.68 P
ATOM 3 OP1 A A 346 -73.855 5.115 -77.253 1.00106.58 O
ATOM 4 OP2 A A 346 -73.166 3.544 -75.340 1.00 94.41 O
ATOM 5 O5' A A 346 -73.932 2.629 -77.533 1.00 96.48 O
ATOM 6 C5' A A 346 -75.175 2.099 -77.121 1.00 85.48 C
ATOM 7 C4' A A 346 -75.539 1.031 -78.127 1.00 91.28 C
ATOM 8 O4' A A 346 -74.381 0.203 -78.392 1.00 93.83 O
ATOM 9 C3' A A 346 -76.574 0.017 -77.690 1.00 92.87 C
ATOM 10 O3' A A 346 -77.852 0.579 -77.775 1.00 86.12 O
ATOM 11 C2' A A 346 -76.361 -1.026 -78.776 1.00101.08 C
ATOM 12 O2' A A 346 -76.868 -0.599 -80.026 1.00101.53 O
ATOM 13 C1' A A 346 -74.836 -1.077 -78.793 1.00102.60 C
ATOM 14 N9 A A 346 -74.327 -2.075 -77.862 1.00100.85 N
ATOM 15 C8 A A 346 -73.604 -1.870 -76.717 1.00102.38 C
ATOM 16 N7 A A 346 -73.294 -2.976 -76.081 1.00 97.20 N
ATOM 17 C5 A A 346 -73.857 -3.971 -76.863 1.00 96.93 C
ATOM 18 C6 A A 346 -73.890 -5.370 -76.739 1.00 99.32 C
ATOM 19 N6 A A 346 -73.317 -6.031 -75.731 1.00104.70 N
ATOM 20 N1 A A 346 -74.535 -6.068 -77.692 1.00 99.33 N
ATOM 21 C2 A A 346 -75.107 -5.403 -78.702 1.00102.18 C
ATOM 22 N3 A A 346 -75.149 -4.093 -78.927 1.00 99.98 N
ATOM 23 C4 A A 346 -74.498 -3.432 -77.961 1.00 97.62 C
ATOM 24 P G A 347 -78.785 0.509 -76.486 1.00 80.59 P
ATOM 25 OP1 G A 347 -80.040 1.201 -76.848 1.00 87.95 O
ATOM 26 OP2 G A 347 -77.972 0.918 -75.319 1.00 92.58 O
ATOM 27 O5' G A 347 -79.115 -1.037 -76.318 1.00 94.22 O
TER

ATOM 1 O3' U B 357 -82.053 0.296 -81.615 1.00110.81 O
ATOM 2 P U B 358 -82.851 -1.075 -81.809 1.00104.03 P
ATOM 3 OP1 U B 358 -83.280 -1.209 -83.227 1.00101.15 O
ATOM 4 OP2 U B 358 -83.835 -1.159 -80.709 1.00 89.35 O
ATOM 5 O5' U B 358 -81.680 -2.124 -81.530 1.00107.09 O
ATOM 6 C5' U B 358 -80.556 -2.144 -82.408 1.00102.37 C
ATOM 7 C4' U B 358 -79.270 -2.557 -81.712 1.00 95.63 C
ATOM 8 O4' U B 358 -79.412 -3.844 -81.059 1.00104.32 O
ATOM 9 C3' U B 358 -78.113 -2.758 -82.677 1.00100.20 C
ATOM 10 O3' U B 358 -77.450 -1.518 -82.874 1.00112.97 O
ATOM 11 C2' U B 358 -77.232 -3.817 -82.003 1.00 97.29 C
ATOM 12 O2' U B 358 -76.072 -3.276 -81.399 1.00100.72 O
ATOM 13 C1' U B 358 -78.138 -4.444 -80.940 1.00 96.29 C
ATOM 14 N1 U B 358 -78.298 -5.905 -81.133 1.00 90.12 N
ATOM 15 C2 U B 358 -78.112 -6.778 -80.083 1.00 96.14 C
ATOM 16 O2 U B 358 -77.822 -6.425 -78.960 1.00 99.48 O
ATOM 17 N3 U B 358 -78.282 -8.102 -80.390 1.00102.23 N
ATOM 18 C4 U B 358 -78.613 -8.628 -81.623 1.00102.99 C
ATOM 19 O4 U B 358 -78.737 -9.839 -81.762 1.00102.01 O
ATOM 20 C5 U B 358 -78.791 -7.655 -82.667 1.00108.33 C
ATOM 21 C6 U B 358 -78.629 -6.358 -82.389 1.00 99.16 C
ATOM 22 P C B 359 -76.382 -1.406 -84.056 1.00125.54 P
ATOM 23 OP1 C B 359 -76.372 -2.713 -84.761 1.00 90.15 O
ATOM 24 OP2 C B 359 -75.137 -0.871 -83.456 1.00 98.24 O
ATOM 25 O5' C B 359 -77.004 -0.275 -85.017 1.00116.53 O
TER

Atoms:
OP1: (-73.855,5.115,-77.253)
OP2: (-73.166,3.544,-75.340)
C3': (-76.574,0.017,-77.690)
C1': (-74.836,-1.077,-78.793)
C5': (-75.175,2.099,-77.121)
O4': (-74.381,0.203,-78.392)
C8: (-73.604,-1.870,-76.717)
O2': (-76.868,-0.599,-80.026)
C6: (-73.890,-5.370,-76.739)
C5: (-73.857,-3.971,-76.863)
C4: (-74.498,-3.432,-77.961)
P: (-73.235,3.856,-76.784)
C4': (-75.539,1.031,-78.127)
C2': (-76.361,-1.026,-78.776)
C2: (-75.107,-5.403,-78.702)
N1: (-74.535,-6.068,-77.692)
N3: (-75.149,-4.093,-78.927)
N6: (-73.317,-6.031,-75.731)
N7: (-73.294,-2.976,-76.081)
N9: (-74.327,-2.075,-77.862)
O5': (-73.932,2.629,-77.533)
O3': (-77.852,0.579,-77.775)
C4: (-78.613,-8.628,-81.623)
N3: (-78.282,-8.102,-80.390)
OP1: (-83.280,-1.209,-83.227)
OP2: (-83.835,-1.159,-80.709)
C2: (-78.112,-6.778,-80.083)
C1': (-78.138,-4.444,-80.940)
C3': (-78.113,-2.758,-82.677)
O5': (-81.680,-2.124,-81.530)
O4': (-79.412,-3.844,-81.059)
C5': (-80.556,-2.144,-82.408)
P: (-82.851,-1.075,-81.809)
C4': (-79.270,-2.557,-81.712)
C2': (-77.232,-3.817,-82.003)
O2': (-76.072,-3.276,-81.399)
N1: (-78.298,-5.905,-81.133)
O4: (-78.737,-9.839,-81.762)
O2: (-77.822,-6.425,-78.960)
C6: (-78.629,-6.358,-82.389)
C5: (-78.791,-7.655,-82.667)
O3': (-77.450,-1.518,-82.874)
Image (generated by PyMOL):
PyMOL image
show in jmol