ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A538:A539

Extra

PDB:
ATOM 1 O3' U A 537 76.406-107.970 2.402 1.00 34.23 O
ATOM 2 P U A 538 76.209-108.195 3.973 1.00 38.79 P
ATOM 3 OP1 U A 538 77.507-108.690 4.504 1.00 52.15 O
ATOM 4 OP2 U A 538 74.987-109.028 4.151 1.00 49.36 O
ATOM 5 O5' U A 538 75.936-106.740 4.518 1.00 39.34 O
ATOM 6 C5' U A 538 76.766-105.653 4.155 1.00 33.20 C
ATOM 7 C4' U A 538 76.037-104.337 4.304 1.00 36.24 C
ATOM 8 O4' U A 538 75.002-104.248 3.318 1.00 40.74 O
ATOM 9 C3' U A 538 75.304-104.131 5.602 1.00 37.03 C
ATOM 10 O3' U A 538 76.145-103.673 6.613 1.00 35.53 O
ATOM 11 C2' U A 538 74.228-103.134 5.236 1.00 39.15 C
ATOM 12 O2' U A 538 74.766-101.829 5.188 1.00 41.01 O
ATOM 13 C1' U A 538 73.905-103.546 3.822 1.00 33.00 C
ATOM 14 N1 U A 538 72.727-104.404 3.730 1.00 34.27 N
ATOM 15 C2 U A 538 71.540-103.803 3.816 1.00 38.51 C
ATOM 16 O2 U A 538 71.453-102.634 4.014 1.00 42.17 O
ATOM 17 N3 U A 538 70.460-104.594 3.679 1.00 46.65 N
ATOM 18 C4 U A 538 70.441-105.939 3.460 1.00 46.99 C
ATOM 19 O4 U A 538 69.365-106.541 3.357 1.00 50.61 O
ATOM 20 C5 U A 538 71.740-106.496 3.370 1.00 49.35 C
ATOM 21 C6 U A 538 72.812-105.729 3.498 1.00 44.56 C
ATOM 22 P A A 539 75.918-104.186 8.100 1.00 36.26 P
ATOM 23 OP1 A A 539 77.261-104.401 8.717 1.00 43.47 O
ATOM 24 OP2 A A 539 74.981-105.346 8.014 1.00 47.60 O
ATOM 25 O5' A A 539 75.212-102.948 8.775 1.00 30.35 O
TER

ATOM 1 O3' U B 538 76.145-103.673 6.613 1.00 35.53 O
ATOM 2 P A B 539 75.918-104.186 8.100 1.00 36.26 P
ATOM 3 OP1 A B 539 77.261-104.401 8.717 1.00 43.47 O
ATOM 4 OP2 A B 539 74.981-105.346 8.014 1.00 47.60 O
ATOM 5 O5' A B 539 75.212-102.948 8.775 1.00 30.35 O
ATOM 6 C5' A B 539 75.792-101.664 8.705 1.00 28.75 C
ATOM 7 C4' A B 539 75.049-100.692 9.557 1.00 27.76 C
ATOM 8 O4' A B 539 73.676-100.657 9.141 1.00 46.30 O
ATOM 9 C3' A B 539 74.973-101.036 11.021 1.00 27.69 C
ATOM 10 O3' A B 539 76.136-100.658 11.725 1.00 24.23 O
ATOM 11 C2' A B 539 73.710-100.310 11.485 1.00 32.68 C
ATOM 12 O2' A B 539 74.003 -98.973 11.823 1.00 32.98 O
ATOM 13 C1' A B 539 72.860-100.294 10.223 1.00 38.84 C
ATOM 14 N9 A B 539 71.686-101.191 10.278 1.00 41.60 N
ATOM 15 C8 A B 539 71.597-102.549 10.190 1.00 44.08 C
ATOM 16 N7 A B 539 70.364-102.994 10.202 1.00 52.97 N
ATOM 17 C5 A B 539 69.581-101.855 10.263 1.00 42.42 C
ATOM 18 C6 A B 539 68.196-101.646 10.284 1.00 33.67 C
ATOM 19 N6 A B 539 67.273-102.598 10.258 1.00 42.46 N
ATOM 20 N1 A B 539 67.754-100.389 10.340 1.00 35.58 N
ATOM 21 C2 A B 539 68.655 -99.404 10.362 1.00 39.19 C
ATOM 22 N3 A B 539 69.981 -99.463 10.326 1.00 46.50 N
ATOM 23 C4 A B 539 70.384-100.739 10.285 1.00 47.69 C
ATOM 24 P C B 540 77.194-101.760 12.178 1.00 28.04 P
ATOM 25 OP1 C B 540 77.536-102.560 10.984 1.00 35.49 O
ATOM 26 OP2 C B 540 76.615-102.457 13.350 1.00 41.31 O
ATOM 27 O5' C B 540 78.455-100.885 12.624 1.00 44.89 O
TER

Atoms:
C4: (70.441,-105.939,3.460)
N3: (70.460,-104.594,3.679)
OP1: (77.507,-108.690,4.504)
OP2: (74.987,-109.028,4.151)
C2: (71.540,-103.803,3.816)
C1': (73.905,-103.546,3.822)
C3': (75.304,-104.131,5.602)
O5': (75.936,-106.740,4.518)
O4': (75.002,-104.248,3.318)
C5': (76.766,-105.653,4.155)
P: (76.209,-108.195,3.973)
C4': (76.037,-104.337,4.304)
C2': (74.228,-103.134,5.236)
O2': (74.766,-101.829,5.188)
N1: (72.727,-104.404,3.730)
O4: (69.365,-106.541,3.357)
O2: (71.453,-102.634,4.014)
C6: (72.812,-105.729,3.498)
C5: (71.740,-106.496,3.370)
O3': (76.145,-103.673,6.613)
OP1: (77.261,-104.401,8.717)
OP2: (74.981,-105.346,8.014)
C3': (74.973,-101.036,11.021)
C1': (72.860,-100.294,10.223)
C5': (75.792,-101.664,8.705)
O4': (73.676,-100.657,9.141)
C8: (71.597,-102.549,10.190)
O2': (74.003,-98.973,11.823)
C6: (68.196,-101.646,10.284)
C5: (69.581,-101.855,10.263)
C4: (70.384,-100.739,10.285)
P: (75.918,-104.186,8.100)
C4': (75.049,-100.692,9.557)
C2': (73.710,-100.310,11.485)
C2: (68.655,-99.404,10.362)
N1: (67.754,-100.389,10.340)
N3: (69.981,-99.463,10.326)
N6: (67.273,-102.598,10.258)
N7: (70.364,-102.994,10.202)
N9: (71.686,-101.191,10.278)
O5': (75.212,-102.948,8.775)
O3': (76.136,-100.658,11.725)
Image (generated by PyMOL):
PyMOL image
show in jmol