ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHK:A538:A539

Extra

PDB:
ATOM 1 O3' U A 537 187.721-111.552 -90.973 1.00 56.13 O
ATOM 2 P U A 538 187.895-113.138 -90.744 1.00 52.96 P
ATOM 3 OP1 U A 538 186.599-113.646 -90.199 1.00 55.57 O
ATOM 4 OP2 U A 538 189.136-113.337 -89.957 1.00 55.42 O
ATOM 5 O5' U A 538 188.104-113.681 -92.225 1.00 50.68 O
ATOM 6 C5' U A 538 187.244-113.271 -93.282 1.00 44.51 C
ATOM 7 C4' U A 538 187.894-113.519 -94.608 1.00 49.03 C
ATOM 8 O4' U A 538 188.960-112.555 -94.816 1.00 50.20 O
ATOM 9 C3' U A 538 188.583-114.864 -94.742 1.00 43.13 C
ATOM 10 O3' U A 538 187.672-115.907 -95.044 1.00 46.15 O
ATOM 11 C2' U A 538 189.621-114.604 -95.828 1.00 40.99 C
ATOM 12 O2' U A 538 189.023-114.647 -97.112 1.00 42.98 O
ATOM 13 C1' U A 538 190.012-113.152 -95.538 1.00 44.35 C
ATOM 14 N1 U A 538 191.241-113.057 -94.740 1.00 49.98 N
ATOM 15 C2 U A 538 192.430-113.115 -95.439 1.00 47.32 C
ATOM 16 O2 U A 538 192.452-113.235 -96.653 1.00 44.82 O
ATOM 17 N3 U A 538 193.562-113.027 -94.657 1.00 48.13 N
ATOM 18 C4 U A 538 193.610-112.879 -93.286 1.00 47.32 C
ATOM 19 O4 U A 538 194.703-112.809 -92.734 1.00 54.68 O
ATOM 20 C5 U A 538 192.336-112.819 -92.637 1.00 51.36 C
ATOM 21 C6 U A 538 191.213-112.908 -93.368 1.00 51.26 C
ATOM 22 P A A 539 188.037-117.420 -94.681 1.00 59.38 P
ATOM 23 OP1 A A 539 186.753-118.158 -94.495 1.00 49.49 O
ATOM 24 OP2 A A 539 189.013-117.369 -93.560 1.00 56.62 O
ATOM 25 O5' A A 539 188.763-117.930 -96.005 1.00 50.52 O
TER

ATOM 1 O3' U B 538 187.672-115.907 -95.044 1.00 46.15 O
ATOM 2 P A B 539 188.037-117.420 -94.681 1.00 59.38 P
ATOM 3 OP1 A B 539 186.753-118.158 -94.495 1.00 49.49 O
ATOM 4 OP2 A B 539 189.013-117.369 -93.560 1.00 56.62 O
ATOM 5 O5' A B 539 188.763-117.930 -96.005 1.00 50.52 O
ATOM 6 C5' A B 539 188.021-118.149 -97.189 1.00 40.42 C
ATOM 7 C4' A B 539 188.783-119.015 -98.134 1.00 27.52 C
ATOM 8 O4' A B 539 190.149-118.580 -98.169 1.00 35.00 O
ATOM 9 C3' A B 539 188.886-120.471 -97.757 1.00 30.00 C
ATOM 10 O3' A B 539 187.717-121.197 -98.108 1.00 39.10 O
ATOM 11 C2' A B 539 190.137-120.927 -98.509 1.00 38.72 C
ATOM 12 O2' A B 539 189.804-121.300 -99.841 1.00 44.29 O
ATOM 13 C1' A B 539 190.961-119.638 -98.583 1.00 38.32 C
ATOM 14 N9 A B 539 192.177-119.656 -97.754 1.00 41.69 N
ATOM 15 C8 A B 539 192.327-119.480 -96.397 1.00 45.96 C
ATOM 16 N7 A B 539 193.596-119.492 -95.998 1.00 49.34 N
ATOM 17 C5 A B 539 194.313-119.670 -97.175 1.00 36.19 C
ATOM 18 C6 A B 539 195.680-119.774 -97.455 1.00 33.06 C
ATOM 19 N6 A B 539 196.626-119.722 -96.528 1.00 42.73 N
ATOM 20 N1 A B 539 196.077-119.943 -98.730 1.00 32.25 N
ATOM 21 C2 A B 539 195.140-120.009 -99.673 1.00 40.37 C
ATOM 22 N3 A B 539 193.811-119.915 -99.538 1.00 45.68 N
ATOM 23 C4 A B 539 193.456-119.750 -98.253 1.00 37.11 C
ATOM 24 P C B 540 186.640-121.598 -96.976 1.00 59.51 P
ATOM 25 OP1 C B 540 186.347-120.360 -96.198 1.00 57.85 O
ATOM 26 OP2 C B 540 187.198-122.778 -96.259 1.00 58.34 O
ATOM 27 O5' C B 540 185.342-122.039 -97.821 1.00 49.43 O
TER

Atoms:
C4: (193.610,-112.879,-93.286)
N3: (193.562,-113.027,-94.657)
OP1: (186.599,-113.646,-90.199)
OP2: (189.136,-113.337,-89.957)
C2: (192.430,-113.115,-95.439)
C1': (190.012,-113.152,-95.538)
C3': (188.583,-114.864,-94.742)
O5': (188.104,-113.681,-92.225)
O4': (188.960,-112.555,-94.816)
C5': (187.244,-113.271,-93.282)
P: (187.895,-113.138,-90.744)
C4': (187.894,-113.519,-94.608)
C2': (189.621,-114.604,-95.828)
O2': (189.023,-114.647,-97.112)
N1: (191.241,-113.057,-94.740)
O4: (194.703,-112.809,-92.734)
O2: (192.452,-113.235,-96.653)
C6: (191.213,-112.908,-93.368)
C5: (192.336,-112.819,-92.637)
O3': (187.672,-115.907,-95.044)
OP1: (186.753,-118.158,-94.495)
OP2: (189.013,-117.369,-93.560)
C3': (188.886,-120.471,-97.757)
C1': (190.961,-119.638,-98.583)
C5': (188.021,-118.149,-97.189)
O4': (190.149,-118.580,-98.169)
C8: (192.327,-119.480,-96.397)
O2': (189.804,-121.300,-99.841)
C6: (195.680,-119.774,-97.455)
C5: (194.313,-119.670,-97.175)
C4: (193.456,-119.750,-98.253)
P: (188.037,-117.420,-94.681)
C4': (188.783,-119.015,-98.134)
C2': (190.137,-120.927,-98.509)
C2: (195.140,-120.009,-99.673)
N1: (196.077,-119.943,-98.730)
N3: (193.811,-119.915,-99.538)
N6: (196.626,-119.722,-96.528)
N7: (193.596,-119.492,-95.998)
N9: (192.177,-119.656,-97.754)
O5': (188.763,-117.930,-96.005)
O3': (187.717,-121.197,-98.108)
Image (generated by PyMOL):
PyMOL image
show in jmol