Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A507:A541
Extra
PDB:
ATOM 1 O3' U A 506 -97.455 35.072 -51.778 1.00 29.79 O
ATOM 2 P A A 507 -97.646 36.500 -52.476 1.00 23.12 P
ATOM 3 OP1 A A 507 -96.432 37.298 -52.166 1.00 23.12 O
ATOM 4 OP2 A A 507 -98.969 37.025 -52.063 1.00 23.12 O
ATOM 5 O5' A A 507 -97.666 36.137 -54.013 1.00 23.12 O
ATOM 6 C5' A A 507 -98.053 37.087 -54.980 1.00 23.12 C
ATOM 7 C4' A A 507 -98.467 36.400 -56.238 1.00 23.12 C
ATOM 8 O4' A A 507 -97.402 35.514 -56.660 1.00 23.12 O
ATOM 9 C3' A A 507 -99.695 35.507 -56.110 1.00 23.12 C
ATOM 10 O3' A A 507 -100.902 36.215 -56.314 1.00 23.12 O
ATOM 11 C2' A A 507 -99.455 34.425 -57.153 1.00 23.12 C
ATOM 12 O2' A A 507 -99.854 34.866 -58.444 1.00 23.12 O
ATOM 13 C1' A A 507 -97.936 34.298 -57.132 1.00 23.12 C
ATOM 14 N9 A A 507 -97.461 33.193 -56.262 1.00 23.32 N
ATOM 15 C8 A A 507 -96.930 33.258 -55.000 1.00 23.32 C
ATOM 16 N7 A A 507 -96.558 32.092 -54.528 1.00 23.32 N
ATOM 17 C5 A A 507 -96.844 31.190 -55.546 1.00 23.32 C
ATOM 18 C6 A A 507 -96.679 29.789 -55.687 1.00 23.32 C
ATOM 19 N6 A A 507 -96.179 28.958 -54.773 1.00 23.32 N
ATOM 20 N1 A A 507 -97.076 29.217 -56.840 1.00 23.32 N
ATOM 21 C2 A A 507 -97.601 30.006 -57.784 1.00 23.32 C
ATOM 22 N3 A A 507 -97.795 31.320 -57.768 1.00 23.32 N
ATOM 23 C4 A A 507 -97.392 31.864 -56.613 1.00 23.32 C
ATOM 24 P A A 508 -101.799 36.682 -55.073 1.00 27.69 P
ATOM 25 OP1 A A 508 -102.325 38.024 -55.399 1.00 27.69 O
ATOM 26 OP2 A A 508 -100.976 36.527 -53.863 1.00 27.69 O
ATOM 27 O5' A A 508 -102.992 35.615 -55.088 1.00 27.69 O
TER
ATOM 1 O3' G B 540 -105.872 33.473 -62.701 1.00 17.57 O
ATOM 2 P U B 541 -104.456 33.465 -63.456 1.00 18.30 P
ATOM 3 OP1 U B 541 -104.123 34.875 -63.823 1.00 18.30 O
ATOM 4 OP2 U B 541 -104.542 32.440 -64.538 1.00 18.30 O
ATOM 5 O5' U B 541 -103.476 32.965 -62.326 1.00 18.30 O
ATOM 6 C5' U B 541 -103.074 33.835 -61.292 1.00 18.30 C
ATOM 7 C4' U B 541 -101.796 33.367 -60.685 1.00 18.30 C
ATOM 8 O4' U B 541 -102.050 32.158 -59.929 1.00 18.30 O
ATOM 9 C3' U B 541 -100.707 32.986 -61.677 1.00 18.30 C
ATOM 10 O3' U B 541 -99.923 34.100 -62.082 1.00 18.30 O
ATOM 11 C2' U B 541 -99.927 31.932 -60.914 1.00 18.30 C
ATOM 12 O2' U B 541 -99.084 32.532 -59.946 1.00 18.30 O
ATOM 13 C1' U B 541 -101.047 31.216 -60.180 1.00 18.30 C
ATOM 14 N1 U B 541 -101.628 30.135 -60.984 1.00 18.46 N
ATOM 15 C2 U B 541 -100.815 29.038 -61.192 1.00 18.46 C
ATOM 16 O2 U B 541 -99.674 28.981 -60.741 1.00 18.46 O
ATOM 17 N3 U B 541 -101.395 28.035 -61.943 1.00 18.46 N
ATOM 18 C4 U B 541 -102.674 28.048 -62.480 1.00 18.46 C
ATOM 19 O4 U B 541 -103.045 27.067 -63.132 1.00 18.46 O
ATOM 20 C5 U B 541 -103.450 29.235 -62.207 1.00 18.46 C
ATOM 21 C6 U B 541 -102.910 30.213 -61.476 1.00 18.46 C
ATOM 22 P G B 542 -98.984 34.012 -63.386 1.00 28.62 P
ATOM 23 OP1 G B 542 -98.275 35.303 -63.502 1.00 28.62 O
ATOM 24 OP2 G B 542 -99.843 33.560 -64.504 1.00 28.62 O
ATOM 25 O5' G B 542 -97.941 32.871 -63.014 1.00 28.62 O
TER
ATOM 2 P A A 507 -97.646 36.500 -52.476 1.00 23.12 P
ATOM 3 OP1 A A 507 -96.432 37.298 -52.166 1.00 23.12 O
ATOM 4 OP2 A A 507 -98.969 37.025 -52.063 1.00 23.12 O
ATOM 5 O5' A A 507 -97.666 36.137 -54.013 1.00 23.12 O
ATOM 6 C5' A A 507 -98.053 37.087 -54.980 1.00 23.12 C
ATOM 7 C4' A A 507 -98.467 36.400 -56.238 1.00 23.12 C
ATOM 8 O4' A A 507 -97.402 35.514 -56.660 1.00 23.12 O
ATOM 9 C3' A A 507 -99.695 35.507 -56.110 1.00 23.12 C
ATOM 10 O3' A A 507 -100.902 36.215 -56.314 1.00 23.12 O
ATOM 11 C2' A A 507 -99.455 34.425 -57.153 1.00 23.12 C
ATOM 12 O2' A A 507 -99.854 34.866 -58.444 1.00 23.12 O
ATOM 13 C1' A A 507 -97.936 34.298 -57.132 1.00 23.12 C
ATOM 14 N9 A A 507 -97.461 33.193 -56.262 1.00 23.32 N
ATOM 15 C8 A A 507 -96.930 33.258 -55.000 1.00 23.32 C
ATOM 16 N7 A A 507 -96.558 32.092 -54.528 1.00 23.32 N
ATOM 17 C5 A A 507 -96.844 31.190 -55.546 1.00 23.32 C
ATOM 18 C6 A A 507 -96.679 29.789 -55.687 1.00 23.32 C
ATOM 19 N6 A A 507 -96.179 28.958 -54.773 1.00 23.32 N
ATOM 20 N1 A A 507 -97.076 29.217 -56.840 1.00 23.32 N
ATOM 21 C2 A A 507 -97.601 30.006 -57.784 1.00 23.32 C
ATOM 22 N3 A A 507 -97.795 31.320 -57.768 1.00 23.32 N
ATOM 23 C4 A A 507 -97.392 31.864 -56.613 1.00 23.32 C
ATOM 24 P A A 508 -101.799 36.682 -55.073 1.00 27.69 P
ATOM 25 OP1 A A 508 -102.325 38.024 -55.399 1.00 27.69 O
ATOM 26 OP2 A A 508 -100.976 36.527 -53.863 1.00 27.69 O
ATOM 27 O5' A A 508 -102.992 35.615 -55.088 1.00 27.69 O
TER
ATOM 1 O3' G B 540 -105.872 33.473 -62.701 1.00 17.57 O
ATOM 2 P U B 541 -104.456 33.465 -63.456 1.00 18.30 P
ATOM 3 OP1 U B 541 -104.123 34.875 -63.823 1.00 18.30 O
ATOM 4 OP2 U B 541 -104.542 32.440 -64.538 1.00 18.30 O
ATOM 5 O5' U B 541 -103.476 32.965 -62.326 1.00 18.30 O
ATOM 6 C5' U B 541 -103.074 33.835 -61.292 1.00 18.30 C
ATOM 7 C4' U B 541 -101.796 33.367 -60.685 1.00 18.30 C
ATOM 8 O4' U B 541 -102.050 32.158 -59.929 1.00 18.30 O
ATOM 9 C3' U B 541 -100.707 32.986 -61.677 1.00 18.30 C
ATOM 10 O3' U B 541 -99.923 34.100 -62.082 1.00 18.30 O
ATOM 11 C2' U B 541 -99.927 31.932 -60.914 1.00 18.30 C
ATOM 12 O2' U B 541 -99.084 32.532 -59.946 1.00 18.30 O
ATOM 13 C1' U B 541 -101.047 31.216 -60.180 1.00 18.30 C
ATOM 14 N1 U B 541 -101.628 30.135 -60.984 1.00 18.46 N
ATOM 15 C2 U B 541 -100.815 29.038 -61.192 1.00 18.46 C
ATOM 16 O2 U B 541 -99.674 28.981 -60.741 1.00 18.46 O
ATOM 17 N3 U B 541 -101.395 28.035 -61.943 1.00 18.46 N
ATOM 18 C4 U B 541 -102.674 28.048 -62.480 1.00 18.46 C
ATOM 19 O4 U B 541 -103.045 27.067 -63.132 1.00 18.46 O
ATOM 20 C5 U B 541 -103.450 29.235 -62.207 1.00 18.46 C
ATOM 21 C6 U B 541 -102.910 30.213 -61.476 1.00 18.46 C
ATOM 22 P G B 542 -98.984 34.012 -63.386 1.00 28.62 P
ATOM 23 OP1 G B 542 -98.275 35.303 -63.502 1.00 28.62 O
ATOM 24 OP2 G B 542 -99.843 33.560 -64.504 1.00 28.62 O
ATOM 25 O5' G B 542 -97.941 32.871 -63.014 1.00 28.62 O
TER
Atoms:
OP1: (-96.432,37.298,-52.166)
OP2: (-98.969,37.025,-52.063)
C3': (-99.695,35.507,-56.110)
C1': (-97.936,34.298,-57.132)
C5': (-98.053,37.087,-54.980)
O4': (-97.402,35.514,-56.660)
C8: (-96.930,33.258,-55.000)
O2': (-99.854,34.866,-58.444)
C6: (-96.679,29.789,-55.687)
C5: (-96.844,31.190,-55.546)
C4: (-97.392,31.864,-56.613)
P: (-97.646,36.500,-52.476)
C4': (-98.467,36.400,-56.238)
C2': (-99.455,34.425,-57.153)
C2: (-97.601,30.006,-57.784)
N1: (-97.076,29.217,-56.840)
N3: (-97.795,31.320,-57.768)
N6: (-96.179,28.958,-54.773)
N7: (-96.558,32.092,-54.528)
N9: (-97.461,33.193,-56.262)
O5': (-97.666,36.137,-54.013)
O3': (-100.902,36.215,-56.314)
OP2: (-98.969,37.025,-52.063)
C3': (-99.695,35.507,-56.110)
C1': (-97.936,34.298,-57.132)
C5': (-98.053,37.087,-54.980)
O4': (-97.402,35.514,-56.660)
C8: (-96.930,33.258,-55.000)
O2': (-99.854,34.866,-58.444)
C6: (-96.679,29.789,-55.687)
C5: (-96.844,31.190,-55.546)
C4: (-97.392,31.864,-56.613)
P: (-97.646,36.500,-52.476)
C4': (-98.467,36.400,-56.238)
C2': (-99.455,34.425,-57.153)
C2: (-97.601,30.006,-57.784)
N1: (-97.076,29.217,-56.840)
N3: (-97.795,31.320,-57.768)
N6: (-96.179,28.958,-54.773)
N7: (-96.558,32.092,-54.528)
N9: (-97.461,33.193,-56.262)
O5': (-97.666,36.137,-54.013)
O3': (-100.902,36.215,-56.314)
C4: (-102.674,28.048,-62.480)
N3: (-101.395,28.035,-61.943)
OP1: (-104.123,34.875,-63.823)
OP2: (-104.542,32.440,-64.538)
C2: (-100.815,29.038,-61.192)
C1': (-101.047,31.216,-60.180)
C3': (-100.707,32.986,-61.677)
O5': (-103.476,32.965,-62.326)
O4': (-102.050,32.158,-59.929)
C5': (-103.074,33.835,-61.292)
P: (-104.456,33.465,-63.456)
C4': (-101.796,33.367,-60.685)
C2': (-99.927,31.932,-60.914)
O2': (-99.084,32.532,-59.946)
N1: (-101.628,30.135,-60.984)
O4: (-103.045,27.067,-63.132)
O2: (-99.674,28.981,-60.741)
C6: (-102.910,30.213,-61.476)
C5: (-103.450,29.235,-62.207)
O3': (-99.923,34.100,-62.082)
N3: (-101.395,28.035,-61.943)
OP1: (-104.123,34.875,-63.823)
OP2: (-104.542,32.440,-64.538)
C2: (-100.815,29.038,-61.192)
C1': (-101.047,31.216,-60.180)
C3': (-100.707,32.986,-61.677)
O5': (-103.476,32.965,-62.326)
O4': (-102.050,32.158,-59.929)
C5': (-103.074,33.835,-61.292)
P: (-104.456,33.465,-63.456)
C4': (-101.796,33.367,-60.685)
C2': (-99.927,31.932,-60.914)
O2': (-99.084,32.532,-59.946)
N1: (-101.628,30.135,-60.984)
O4: (-103.045,27.067,-63.132)
O2: (-99.674,28.981,-60.741)
C6: (-102.910,30.213,-61.476)
C5: (-103.450,29.235,-62.207)
O3': (-99.923,34.100,-62.082)
Image (generated by PyMOL):