Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A1126:A1125
Extra
PDB:
ATOM 1 O3' U A1125 -102.753 120.430 41.184 1.00 38.62 O
ATOM 2 P C A1126 -101.655 119.259 41.113 1.00 70.06 P
ATOM 3 OP1 C A1126 -100.622 119.577 42.121 1.00 53.00 O
ATOM 4 OP2 C A1126 -101.250 119.054 39.698 1.00 52.47 O
ATOM 5 O5' C A1126 -102.460 117.970 41.598 1.00 62.02 O
ATOM 6 C5' C A1126 -103.194 117.988 42.835 1.00 62.21 C
ATOM 7 C4' C A1126 -104.199 116.860 42.872 1.00 62.95 C
ATOM 8 O4' C A1126 -105.112 116.999 41.753 1.00 63.56 O
ATOM 9 C3' C A1126 -103.657 115.440 42.737 1.00 63.48 C
ATOM 10 O3' C A1126 -103.181 114.906 43.968 1.00 64.66 O
ATOM 11 C2' C A1126 -104.867 114.673 42.218 1.00 63.39 C
ATOM 12 O2' C A1126 -105.772 114.321 43.248 1.00 61.92 O
ATOM 13 C1' C A1126 -105.513 115.712 41.302 1.00 63.33 C
ATOM 14 N1 C A1126 -105.109 115.547 39.888 1.00 56.45 N
ATOM 15 C2 C A1126 -105.802 114.613 39.097 1.00 56.10 C
ATOM 16 O2 C A1126 -106.716 113.944 39.615 1.00 55.28 O
ATOM 17 N3 C A1126 -105.452 114.459 37.793 1.00 55.68 N
ATOM 18 C4 C A1126 -104.453 115.180 37.278 1.00 55.82 C
ATOM 19 N4 C A1126 -104.147 114.987 35.994 1.00 55.59 N
ATOM 20 C5 C A1126 -103.726 116.130 38.060 1.00 56.16 C
ATOM 21 C6 C A1126 -104.084 116.281 39.347 1.00 56.46 C
ATOM 22 P U A1127 -101.953 113.867 43.958 1.00140.64 P
ATOM 23 OP1 U A1127 -101.456 113.768 45.353 1.00 91.74 O
ATOM 24 OP2 U A1127 -101.010 114.237 42.863 1.00 90.45 O
ATOM 25 O5' U A1127 -102.634 112.479 43.579 1.00 51.04 O
TER
ATOM 1 O3' C B1124 -103.518 122.679 35.637 1.00 76.89 O
ATOM 2 P U B1125 -102.462 121.702 36.345 1.00 58.40 P
ATOM 3 OP1 U B1125 -101.250 122.500 36.667 1.00100.59 O
ATOM 4 OP2 U B1125 -102.334 120.484 35.509 1.00 99.86 O
ATOM 5 O5' U B1125 -103.212 121.304 37.694 1.00 42.01 O
ATOM 6 C5' U B1125 -103.527 122.313 38.670 1.00 40.64 C
ATOM 7 C4' U B1125 -104.329 121.728 39.806 1.00 39.71 C
ATOM 8 O4' U B1125 -105.711 121.531 39.411 1.00 39.72 O
ATOM 9 C3' U B1125 -103.889 120.371 40.329 1.00 39.38 C
ATOM 10 O3' U B1125 -102.753 120.430 41.184 1.00 38.62 O
ATOM 11 C2' U B1125 -105.148 119.869 41.029 1.00 39.49 C
ATOM 12 O2' U B1125 -105.309 120.364 42.341 1.00 38.65 O
ATOM 13 C1' U B1125 -106.249 120.424 40.121 1.00 39.74 C
ATOM 14 N1 U B1125 -106.672 119.397 39.160 1.00 50.43 N
ATOM 15 C2 U B1125 -107.776 118.619 39.492 1.00 50.54 C
ATOM 16 O2 U B1125 -108.448 118.806 40.498 1.00 50.83 O
ATOM 17 N3 U B1125 -108.067 117.618 38.599 1.00 51.18 N
ATOM 18 C4 U B1125 -107.394 117.329 37.423 1.00 52.52 C
ATOM 19 O4 U B1125 -107.746 116.358 36.748 1.00 53.44 O
ATOM 20 C5 U B1125 -106.291 118.203 37.130 1.00 52.47 C
ATOM 21 C6 U B1125 -105.978 119.182 37.983 1.00 51.11 C
ATOM 22 P C B1126 -101.655 119.259 41.113 1.00 70.06 P
ATOM 23 OP1 C B1126 -100.622 119.577 42.121 1.00 53.00 O
ATOM 24 OP2 C B1126 -101.250 119.054 39.698 1.00 52.47 O
ATOM 25 O5' C B1126 -102.460 117.970 41.598 1.00 62.02 O
TER
ATOM 2 P C A1126 -101.655 119.259 41.113 1.00 70.06 P
ATOM 3 OP1 C A1126 -100.622 119.577 42.121 1.00 53.00 O
ATOM 4 OP2 C A1126 -101.250 119.054 39.698 1.00 52.47 O
ATOM 5 O5' C A1126 -102.460 117.970 41.598 1.00 62.02 O
ATOM 6 C5' C A1126 -103.194 117.988 42.835 1.00 62.21 C
ATOM 7 C4' C A1126 -104.199 116.860 42.872 1.00 62.95 C
ATOM 8 O4' C A1126 -105.112 116.999 41.753 1.00 63.56 O
ATOM 9 C3' C A1126 -103.657 115.440 42.737 1.00 63.48 C
ATOM 10 O3' C A1126 -103.181 114.906 43.968 1.00 64.66 O
ATOM 11 C2' C A1126 -104.867 114.673 42.218 1.00 63.39 C
ATOM 12 O2' C A1126 -105.772 114.321 43.248 1.00 61.92 O
ATOM 13 C1' C A1126 -105.513 115.712 41.302 1.00 63.33 C
ATOM 14 N1 C A1126 -105.109 115.547 39.888 1.00 56.45 N
ATOM 15 C2 C A1126 -105.802 114.613 39.097 1.00 56.10 C
ATOM 16 O2 C A1126 -106.716 113.944 39.615 1.00 55.28 O
ATOM 17 N3 C A1126 -105.452 114.459 37.793 1.00 55.68 N
ATOM 18 C4 C A1126 -104.453 115.180 37.278 1.00 55.82 C
ATOM 19 N4 C A1126 -104.147 114.987 35.994 1.00 55.59 N
ATOM 20 C5 C A1126 -103.726 116.130 38.060 1.00 56.16 C
ATOM 21 C6 C A1126 -104.084 116.281 39.347 1.00 56.46 C
ATOM 22 P U A1127 -101.953 113.867 43.958 1.00140.64 P
ATOM 23 OP1 U A1127 -101.456 113.768 45.353 1.00 91.74 O
ATOM 24 OP2 U A1127 -101.010 114.237 42.863 1.00 90.45 O
ATOM 25 O5' U A1127 -102.634 112.479 43.579 1.00 51.04 O
TER
ATOM 1 O3' C B1124 -103.518 122.679 35.637 1.00 76.89 O
ATOM 2 P U B1125 -102.462 121.702 36.345 1.00 58.40 P
ATOM 3 OP1 U B1125 -101.250 122.500 36.667 1.00100.59 O
ATOM 4 OP2 U B1125 -102.334 120.484 35.509 1.00 99.86 O
ATOM 5 O5' U B1125 -103.212 121.304 37.694 1.00 42.01 O
ATOM 6 C5' U B1125 -103.527 122.313 38.670 1.00 40.64 C
ATOM 7 C4' U B1125 -104.329 121.728 39.806 1.00 39.71 C
ATOM 8 O4' U B1125 -105.711 121.531 39.411 1.00 39.72 O
ATOM 9 C3' U B1125 -103.889 120.371 40.329 1.00 39.38 C
ATOM 10 O3' U B1125 -102.753 120.430 41.184 1.00 38.62 O
ATOM 11 C2' U B1125 -105.148 119.869 41.029 1.00 39.49 C
ATOM 12 O2' U B1125 -105.309 120.364 42.341 1.00 38.65 O
ATOM 13 C1' U B1125 -106.249 120.424 40.121 1.00 39.74 C
ATOM 14 N1 U B1125 -106.672 119.397 39.160 1.00 50.43 N
ATOM 15 C2 U B1125 -107.776 118.619 39.492 1.00 50.54 C
ATOM 16 O2 U B1125 -108.448 118.806 40.498 1.00 50.83 O
ATOM 17 N3 U B1125 -108.067 117.618 38.599 1.00 51.18 N
ATOM 18 C4 U B1125 -107.394 117.329 37.423 1.00 52.52 C
ATOM 19 O4 U B1125 -107.746 116.358 36.748 1.00 53.44 O
ATOM 20 C5 U B1125 -106.291 118.203 37.130 1.00 52.47 C
ATOM 21 C6 U B1125 -105.978 119.182 37.983 1.00 51.11 C
ATOM 22 P C B1126 -101.655 119.259 41.113 1.00 70.06 P
ATOM 23 OP1 C B1126 -100.622 119.577 42.121 1.00 53.00 O
ATOM 24 OP2 C B1126 -101.250 119.054 39.698 1.00 52.47 O
ATOM 25 O5' C B1126 -102.460 117.970 41.598 1.00 62.02 O
TER
Atoms:
C2: (-105.802,114.613,39.097)
OP1: (-100.622,119.577,42.121)
OP2: (-101.250,119.054,39.698)
C4: (-104.453,115.180,37.278)
O5': (-102.460,117.970,41.598)
C3': (-103.657,115.440,42.737)
C1': (-105.513,115.712,41.302)
O4': (-105.112,116.999,41.753)
C5': (-103.194,117.988,42.835)
P: (-101.655,119.259,41.113)
O2: (-106.716,113.944,39.615)
C4': (-104.199,116.860,42.872)
C2': (-104.867,114.673,42.218)
O2': (-105.772,114.321,43.248)
N1: (-105.109,115.547,39.888)
N3: (-105.452,114.459,37.793)
N4: (-104.147,114.987,35.994)
C6: (-104.084,116.281,39.347)
C5: (-103.726,116.130,38.060)
O3': (-103.181,114.906,43.968)
OP1: (-100.622,119.577,42.121)
OP2: (-101.250,119.054,39.698)
C4: (-104.453,115.180,37.278)
O5': (-102.460,117.970,41.598)
C3': (-103.657,115.440,42.737)
C1': (-105.513,115.712,41.302)
O4': (-105.112,116.999,41.753)
C5': (-103.194,117.988,42.835)
P: (-101.655,119.259,41.113)
O2: (-106.716,113.944,39.615)
C4': (-104.199,116.860,42.872)
C2': (-104.867,114.673,42.218)
O2': (-105.772,114.321,43.248)
N1: (-105.109,115.547,39.888)
N3: (-105.452,114.459,37.793)
N4: (-104.147,114.987,35.994)
C6: (-104.084,116.281,39.347)
C5: (-103.726,116.130,38.060)
O3': (-103.181,114.906,43.968)
C4: (-107.394,117.329,37.423)
N3: (-108.067,117.618,38.599)
OP1: (-101.250,122.500,36.667)
OP2: (-102.334,120.484,35.509)
C2: (-107.776,118.619,39.492)
C1': (-106.249,120.424,40.121)
C3': (-103.889,120.371,40.329)
O5': (-103.212,121.304,37.694)
O4': (-105.711,121.531,39.411)
C5': (-103.527,122.313,38.670)
P: (-102.462,121.702,36.345)
C4': (-104.329,121.728,39.806)
C2': (-105.148,119.869,41.029)
O2': (-105.309,120.364,42.341)
N1: (-106.672,119.397,39.160)
O4: (-107.746,116.358,36.748)
O2: (-108.448,118.806,40.498)
C6: (-105.978,119.182,37.983)
C5: (-106.291,118.203,37.130)
O3': (-102.753,120.430,41.184)
N3: (-108.067,117.618,38.599)
OP1: (-101.250,122.500,36.667)
OP2: (-102.334,120.484,35.509)
C2: (-107.776,118.619,39.492)
C1': (-106.249,120.424,40.121)
C3': (-103.889,120.371,40.329)
O5': (-103.212,121.304,37.694)
O4': (-105.711,121.531,39.411)
C5': (-103.527,122.313,38.670)
P: (-102.462,121.702,36.345)
C4': (-104.329,121.728,39.806)
C2': (-105.148,119.869,41.029)
O2': (-105.309,120.364,42.341)
N1: (-106.672,119.397,39.160)
O4: (-107.746,116.358,36.748)
O2: (-108.448,118.806,40.498)
C6: (-105.978,119.182,37.983)
C5: (-106.291,118.203,37.130)
O3': (-102.753,120.430,41.184)
Image (generated by PyMOL):