Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXE:A39:B5
Extra
PDB:
ATOM 1 O3' C A 38 -20.781 -51.578 14.567 1.00 67.25 O
ATOM 2 P A A 39 -22.384 -51.572 14.530 1.00 67.19 P
ATOM 3 OP1 A A 39 -22.856 -52.657 15.421 1.00 67.20 O
ATOM 4 OP2 A A 39 -22.849 -51.507 13.123 1.00 67.68 O
ATOM 5 O5' A A 39 -22.714 -50.160 15.201 1.00 65.62 O
ATOM 6 C5' A A 39 -22.445 -49.923 16.579 1.00 63.66 C
ATOM 7 C4' A A 39 -22.733 -48.476 16.915 1.00 62.10 C
ATOM 8 O4' A A 39 -21.727 -47.628 16.320 1.00 61.97 O
ATOM 9 C3' A A 39 -24.016 -47.917 16.331 1.00 62.01 C
ATOM 10 O3' A A 39 -25.117 -48.357 17.107 1.00 62.00 O
ATOM 11 C2' A A 39 -23.759 -46.417 16.448 1.00 61.36 C
ATOM 12 O2' A A 39 -23.954 -45.899 17.754 1.00 60.31 O
ATOM 13 C1' A A 39 -22.279 -46.342 16.092 1.00 61.30 C
ATOM 14 N9 A A 39 -22.002 -45.927 14.715 1.00 61.69 N
ATOM 15 C8 A A 39 -21.636 -46.729 13.671 1.00 62.82 C
ATOM 16 N7 A A 39 -21.437 -46.089 12.543 1.00 63.30 N
ATOM 17 C5 A A 39 -21.692 -44.770 12.866 1.00 62.50 C
ATOM 18 C6 A A 39 -21.656 -43.580 12.105 1.00 63.13 C
ATOM 19 N6 A A 39 -21.340 -43.540 10.804 1.00 64.24 N
ATOM 20 N1 A A 39 -21.966 -42.424 12.734 1.00 62.56 N
ATOM 21 C2 A A 39 -22.284 -42.462 14.035 1.00 61.53 C
ATOM 22 N3 A A 39 -22.347 -43.518 14.848 1.00 61.08 N
ATOM 23 C4 A A 39 -22.039 -44.653 14.200 1.00 61.51 C
ATOM 24 P A A 40 -26.496 -48.786 16.414 1.00 62.41 P
ATOM 25 OP1 A A 40 -27.288 -49.489 17.450 1.00 61.90 O
ATOM 26 OP2 A A 40 -26.217 -49.454 15.120 1.00 63.46 O
ATOM 27 O5' A A 40 -27.164 -47.370 16.082 1.00 61.72 O
TER
ATOM 1 O3' C B 4 -29.149 -40.361 20.535 1.00 65.96 O
ATOM 2 P U B 5 -27.910 -40.670 21.500 1.00 64.60 P
ATOM 3 OP1 U B 5 -28.300 -41.758 22.424 1.00 64.57 O
ATOM 4 OP2 U B 5 -27.391 -39.386 22.025 1.00 64.17 O
ATOM 5 O5' U B 5 -26.814 -41.234 20.490 1.00 64.14 O
ATOM 6 C5' U B 5 -26.968 -42.498 19.863 1.00 63.14 C
ATOM 7 C4' U B 5 -25.895 -42.649 18.806 1.00 62.30 C
ATOM 8 O4' U B 5 -25.972 -41.545 17.868 1.00 62.50 O
ATOM 9 C3' U B 5 -24.465 -42.561 19.314 1.00 61.01 C
ATOM 10 O3' U B 5 -24.048 -43.765 19.933 1.00 59.72 O
ATOM 11 C2' U B 5 -23.733 -42.285 18.008 1.00 61.23 C
ATOM 12 O2' U B 5 -23.608 -43.431 17.196 1.00 61.28 O
ATOM 13 C1' U B 5 -24.679 -41.284 17.348 1.00 62.04 C
ATOM 14 N1 U B 5 -24.270 -39.862 17.602 1.00 62.32 N
ATOM 15 C2 U B 5 -23.235 -39.321 16.861 1.00 62.29 C
ATOM 16 O2 U B 5 -22.638 -39.936 16.001 1.00 62.38 O
ATOM 17 N3 U B 5 -22.913 -38.018 17.160 1.00 62.58 N
ATOM 18 C4 U B 5 -23.509 -37.213 18.115 1.00 63.29 C
ATOM 19 O4 U B 5 -23.116 -36.060 18.272 1.00 64.00 O
ATOM 20 C5 U B 5 -24.578 -37.841 18.854 1.00 63.33 C
ATOM 21 C6 U B 5 -24.910 -39.111 18.575 1.00 62.99 C
ATOM 22 P G B 6 -23.043 -43.707 21.179 1.00 58.96 P
ATOM 23 OP1 G B 6 -23.288 -44.924 21.984 1.00 58.99 O
ATOM 24 OP2 G B 6 -23.110 -42.374 21.824 1.00 58.70 O
ATOM 25 O5' G B 6 -21.603 -43.794 20.490 1.00 58.16 O
TER
ATOM 2 P A A 39 -22.384 -51.572 14.530 1.00 67.19 P
ATOM 3 OP1 A A 39 -22.856 -52.657 15.421 1.00 67.20 O
ATOM 4 OP2 A A 39 -22.849 -51.507 13.123 1.00 67.68 O
ATOM 5 O5' A A 39 -22.714 -50.160 15.201 1.00 65.62 O
ATOM 6 C5' A A 39 -22.445 -49.923 16.579 1.00 63.66 C
ATOM 7 C4' A A 39 -22.733 -48.476 16.915 1.00 62.10 C
ATOM 8 O4' A A 39 -21.727 -47.628 16.320 1.00 61.97 O
ATOM 9 C3' A A 39 -24.016 -47.917 16.331 1.00 62.01 C
ATOM 10 O3' A A 39 -25.117 -48.357 17.107 1.00 62.00 O
ATOM 11 C2' A A 39 -23.759 -46.417 16.448 1.00 61.36 C
ATOM 12 O2' A A 39 -23.954 -45.899 17.754 1.00 60.31 O
ATOM 13 C1' A A 39 -22.279 -46.342 16.092 1.00 61.30 C
ATOM 14 N9 A A 39 -22.002 -45.927 14.715 1.00 61.69 N
ATOM 15 C8 A A 39 -21.636 -46.729 13.671 1.00 62.82 C
ATOM 16 N7 A A 39 -21.437 -46.089 12.543 1.00 63.30 N
ATOM 17 C5 A A 39 -21.692 -44.770 12.866 1.00 62.50 C
ATOM 18 C6 A A 39 -21.656 -43.580 12.105 1.00 63.13 C
ATOM 19 N6 A A 39 -21.340 -43.540 10.804 1.00 64.24 N
ATOM 20 N1 A A 39 -21.966 -42.424 12.734 1.00 62.56 N
ATOM 21 C2 A A 39 -22.284 -42.462 14.035 1.00 61.53 C
ATOM 22 N3 A A 39 -22.347 -43.518 14.848 1.00 61.08 N
ATOM 23 C4 A A 39 -22.039 -44.653 14.200 1.00 61.51 C
ATOM 24 P A A 40 -26.496 -48.786 16.414 1.00 62.41 P
ATOM 25 OP1 A A 40 -27.288 -49.489 17.450 1.00 61.90 O
ATOM 26 OP2 A A 40 -26.217 -49.454 15.120 1.00 63.46 O
ATOM 27 O5' A A 40 -27.164 -47.370 16.082 1.00 61.72 O
TER
ATOM 1 O3' C B 4 -29.149 -40.361 20.535 1.00 65.96 O
ATOM 2 P U B 5 -27.910 -40.670 21.500 1.00 64.60 P
ATOM 3 OP1 U B 5 -28.300 -41.758 22.424 1.00 64.57 O
ATOM 4 OP2 U B 5 -27.391 -39.386 22.025 1.00 64.17 O
ATOM 5 O5' U B 5 -26.814 -41.234 20.490 1.00 64.14 O
ATOM 6 C5' U B 5 -26.968 -42.498 19.863 1.00 63.14 C
ATOM 7 C4' U B 5 -25.895 -42.649 18.806 1.00 62.30 C
ATOM 8 O4' U B 5 -25.972 -41.545 17.868 1.00 62.50 O
ATOM 9 C3' U B 5 -24.465 -42.561 19.314 1.00 61.01 C
ATOM 10 O3' U B 5 -24.048 -43.765 19.933 1.00 59.72 O
ATOM 11 C2' U B 5 -23.733 -42.285 18.008 1.00 61.23 C
ATOM 12 O2' U B 5 -23.608 -43.431 17.196 1.00 61.28 O
ATOM 13 C1' U B 5 -24.679 -41.284 17.348 1.00 62.04 C
ATOM 14 N1 U B 5 -24.270 -39.862 17.602 1.00 62.32 N
ATOM 15 C2 U B 5 -23.235 -39.321 16.861 1.00 62.29 C
ATOM 16 O2 U B 5 -22.638 -39.936 16.001 1.00 62.38 O
ATOM 17 N3 U B 5 -22.913 -38.018 17.160 1.00 62.58 N
ATOM 18 C4 U B 5 -23.509 -37.213 18.115 1.00 63.29 C
ATOM 19 O4 U B 5 -23.116 -36.060 18.272 1.00 64.00 O
ATOM 20 C5 U B 5 -24.578 -37.841 18.854 1.00 63.33 C
ATOM 21 C6 U B 5 -24.910 -39.111 18.575 1.00 62.99 C
ATOM 22 P G B 6 -23.043 -43.707 21.179 1.00 58.96 P
ATOM 23 OP1 G B 6 -23.288 -44.924 21.984 1.00 58.99 O
ATOM 24 OP2 G B 6 -23.110 -42.374 21.824 1.00 58.70 O
ATOM 25 O5' G B 6 -21.603 -43.794 20.490 1.00 58.16 O
TER
Atoms:
OP1: (-22.856,-52.657,15.421)
OP2: (-22.849,-51.507,13.123)
C3': (-24.016,-47.917,16.331)
C1': (-22.279,-46.342,16.092)
C5': (-22.445,-49.923,16.579)
O4': (-21.727,-47.628,16.320)
C8: (-21.636,-46.729,13.671)
O2': (-23.954,-45.899,17.754)
C6: (-21.656,-43.580,12.105)
C5: (-21.692,-44.770,12.866)
C4: (-22.039,-44.653,14.200)
P: (-22.384,-51.572,14.530)
C4': (-22.733,-48.476,16.915)
C2': (-23.759,-46.417,16.448)
C2: (-22.284,-42.462,14.035)
N1: (-21.966,-42.424,12.734)
N3: (-22.347,-43.518,14.848)
N6: (-21.340,-43.540,10.804)
N7: (-21.437,-46.089,12.543)
N9: (-22.002,-45.927,14.715)
O5': (-22.714,-50.160,15.201)
O3': (-25.117,-48.357,17.107)
OP2: (-22.849,-51.507,13.123)
C3': (-24.016,-47.917,16.331)
C1': (-22.279,-46.342,16.092)
C5': (-22.445,-49.923,16.579)
O4': (-21.727,-47.628,16.320)
C8: (-21.636,-46.729,13.671)
O2': (-23.954,-45.899,17.754)
C6: (-21.656,-43.580,12.105)
C5: (-21.692,-44.770,12.866)
C4: (-22.039,-44.653,14.200)
P: (-22.384,-51.572,14.530)
C4': (-22.733,-48.476,16.915)
C2': (-23.759,-46.417,16.448)
C2: (-22.284,-42.462,14.035)
N1: (-21.966,-42.424,12.734)
N3: (-22.347,-43.518,14.848)
N6: (-21.340,-43.540,10.804)
N7: (-21.437,-46.089,12.543)
N9: (-22.002,-45.927,14.715)
O5': (-22.714,-50.160,15.201)
O3': (-25.117,-48.357,17.107)
C4: (-23.509,-37.213,18.115)
N3: (-22.913,-38.018,17.160)
OP1: (-28.300,-41.758,22.424)
OP2: (-27.391,-39.386,22.025)
C2: (-23.235,-39.321,16.861)
C1': (-24.679,-41.284,17.348)
C3': (-24.465,-42.561,19.314)
O5': (-26.814,-41.234,20.490)
O4': (-25.972,-41.545,17.868)
C5': (-26.968,-42.498,19.863)
P: (-27.910,-40.670,21.500)
C4': (-25.895,-42.649,18.806)
C2': (-23.733,-42.285,18.008)
O2': (-23.608,-43.431,17.196)
N1: (-24.270,-39.862,17.602)
O4: (-23.116,-36.060,18.272)
O2: (-22.638,-39.936,16.001)
C6: (-24.910,-39.111,18.575)
C5: (-24.578,-37.841,18.854)
O3': (-24.048,-43.765,19.933)
N3: (-22.913,-38.018,17.160)
OP1: (-28.300,-41.758,22.424)
OP2: (-27.391,-39.386,22.025)
C2: (-23.235,-39.321,16.861)
C1': (-24.679,-41.284,17.348)
C3': (-24.465,-42.561,19.314)
O5': (-26.814,-41.234,20.490)
O4': (-25.972,-41.545,17.868)
C5': (-26.968,-42.498,19.863)
P: (-27.910,-40.670,21.500)
C4': (-25.895,-42.649,18.806)
C2': (-23.733,-42.285,18.008)
O2': (-23.608,-43.431,17.196)
N1: (-24.270,-39.862,17.602)
O4: (-23.116,-36.060,18.272)
O2: (-22.638,-39.936,16.001)
C6: (-24.910,-39.111,18.575)
C5: (-24.578,-37.841,18.854)
O3': (-24.048,-43.765,19.933)
Image (generated by PyMOL):