ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNK:A538:A539

Extra

PDB:
ATOM 1 O3' U A 537 81.965-111.673 93.765 1.00 81.84 O
ATOM 2 P U A 538 82.420-110.122 93.934 1.00 80.34 P
ATOM 3 OP1 U A 538 81.288-109.196 93.694 1.00 72.29 O
ATOM 4 OP2 U A 538 83.676-109.928 93.168 1.00 74.41 O
ATOM 5 O5' U A 538 82.816-110.026 95.473 1.00 73.53 O
ATOM 6 C5' U A 538 81.846-110.222 96.498 1.00 75.74 C
ATOM 7 C4' U A 538 82.425-109.814 97.831 1.00 74.43 C
ATOM 8 O4' U A 538 83.449-110.762 98.209 1.00 67.28 O
ATOM 9 C3' U A 538 83.098-108.441 97.827 1.00 75.30 C
ATOM 10 O3' U A 538 82.147-107.427 98.156 1.00 72.66 O
ATOM 11 C2' U A 538 84.189-108.582 98.884 1.00 76.30 C
ATOM 12 O2' U A 538 83.754-108.249 100.191 1.00 61.95 O
ATOM 13 C1' U A 538 84.536-110.077 98.787 1.00 74.67 C
ATOM 14 N1 U A 538 85.728-110.409 97.996 1.00 77.84 N
ATOM 15 C2 U A 538 86.952-110.250 98.588 1.00 75.88 C
ATOM 16 O2 U A 538 87.082-109.791 99.707 1.00 75.97 O
ATOM 17 N3 U A 538 88.021-110.636 97.821 1.00 78.54 N
ATOM 18 C4 U A 538 87.990-111.143 96.543 1.00 80.61 C
ATOM 19 O4 U A 538 89.034-111.556 96.026 1.00 85.21 O
ATOM 20 C5 U A 538 86.684-111.241 95.982 1.00 80.18 C
ATOM 21 C6 U A 538 85.625-110.884 96.709 1.00 81.68 C
ATOM 22 P A A 539 82.355-105.911 97.651 1.00 78.44 P
ATOM 23 OP1 A A 539 81.016-105.257 97.513 1.00 69.17 O
ATOM 24 OP2 A A 539 83.286-105.939 96.496 1.00 84.37 O
ATOM 25 O5' A A 539 83.111-105.247 98.873 1.00 63.87 O
TER

ATOM 1 O3' U B 538 82.147-107.427 98.156 1.00 72.66 O
ATOM 2 P A B 539 82.355-105.911 97.651 1.00 78.44 P
ATOM 3 OP1 A B 539 81.016-105.257 97.513 1.00 69.17 O
ATOM 4 OP2 A B 539 83.286-105.939 96.496 1.00 84.37 O
ATOM 5 O5' A B 539 83.111-105.247 98.873 1.00 63.87 O
ATOM 6 C5' A B 539 82.822-105.682 100.187 1.00 67.00 C
ATOM 7 C4' A B 539 83.603-104.889 101.187 1.00 72.32 C
ATOM 8 O4' A B 539 84.993-105.322 101.210 1.00 80.78 O
ATOM 9 C3' A B 539 83.663-103.391 100.938 1.00 72.79 C
ATOM 10 O3' A B 539 82.431-102.737 101.326 1.00 77.86 O
ATOM 11 C2' A B 539 84.910-102.991 101.742 1.00 71.08 C
ATOM 12 O2' A B 539 84.670-102.760 103.118 1.00 68.81 O
ATOM 13 C1' A B 539 85.806-104.236 101.619 1.00 76.60 C
ATOM 14 N9 A B 539 86.946-104.080 100.703 1.00 79.82 N
ATOM 15 C8 A B 539 86.941-103.818 99.347 1.00 82.72 C
ATOM 16 N7 A B 539 88.137-103.627 98.838 1.00 84.12 N
ATOM 17 C5 A B 539 88.992-103.795 99.921 1.00 81.61 C
ATOM 18 C6 A B 539 90.389-103.706 100.049 1.00 76.37 C
ATOM 19 N6 A B 539 91.214-103.404 99.040 1.00 76.25 N
ATOM 20 N1 A B 539 90.919-103.936 101.267 1.00 70.99 N
ATOM 21 C2 A B 539 90.105-104.229 102.280 1.00 73.83 C
ATOM 22 N3 A B 539 88.782-104.340 102.292 1.00 78.41 N
ATOM 23 C4 A B 539 88.275-104.105 101.069 1.00 80.80 C
ATOM 24 P C B 540 81.313-102.358 100.201 1.00 76.48 P
ATOM 25 OP1 C B 540 80.939-103.580 99.430 1.00 76.35 O
ATOM 26 OP2 C B 540 81.755-101.152 99.457 1.00 62.30 O
ATOM 27 O5' C B 540 80.033-101.888 101.026 1.00 78.59 O
TER

Atoms:
C4: (87.990,-111.143,96.543)
N3: (88.021,-110.636,97.821)
OP1: (81.288,-109.196,93.694)
OP2: (83.676,-109.928,93.168)
C2: (86.952,-110.250,98.588)
C1': (84.536,-110.077,98.787)
C3': (83.098,-108.441,97.827)
O5': (82.816,-110.026,95.473)
O4': (83.449,-110.762,98.209)
C5': (81.846,-110.222,96.498)
P: (82.420,-110.122,93.934)
C4': (82.425,-109.814,97.831)
C2': (84.189,-108.582,98.884)
O2': (83.754,-108.249,100.191)
N1: (85.728,-110.409,97.996)
O4: (89.034,-111.556,96.026)
O2: (87.082,-109.791,99.707)
C6: (85.625,-110.884,96.709)
C5: (86.684,-111.241,95.982)
O3': (82.147,-107.427,98.156)
OP1: (81.016,-105.257,97.513)
OP2: (83.286,-105.939,96.496)
C3': (83.663,-103.391,100.938)
C1': (85.806,-104.236,101.619)
C5': (82.822,-105.682,100.187)
O4': (84.993,-105.322,101.210)
C8: (86.941,-103.818,99.347)
O2': (84.670,-102.760,103.118)
C6: (90.389,-103.706,100.049)
C5: (88.992,-103.795,99.921)
C4: (88.275,-104.105,101.069)
P: (82.355,-105.911,97.651)
C4': (83.603,-104.889,101.187)
C2': (84.910,-102.991,101.742)
C2: (90.105,-104.229,102.280)
N1: (90.919,-103.936,101.267)
N3: (88.782,-104.340,102.292)
N6: (91.214,-103.404,99.040)
N7: (88.137,-103.627,98.838)
N9: (86.946,-104.080,100.703)
O5': (83.111,-105.247,98.873)
O3': (82.431,-102.737,101.326)
Image (generated by PyMOL):
PyMOL image
show in jmol