Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNH:A109:A173
Extra
PDB:
ATOM 1 O3' U A 108 26.744 16.224 60.991 1.00 89.77 O
ATOM 2 P G A 109 26.055 16.113 62.429 1.00 88.58 P
ATOM 3 OP1 G A 109 26.166 17.451 63.054 1.00 87.53 O
ATOM 4 OP2 G A 109 26.602 14.925 63.139 1.00 88.25 O
ATOM 5 O5' G A 109 24.526 15.852 62.067 1.00 93.79 O
ATOM 6 C5' G A 109 24.146 14.832 61.136 1.00 90.68 C
ATOM 7 C4' G A 109 23.030 15.330 60.241 1.00 88.68 C
ATOM 8 O4' G A 109 22.166 16.203 60.988 1.00 97.43 O
ATOM 9 C3' G A 109 23.439 16.165 59.029 1.00 92.22 C
ATOM 10 O3' G A 109 23.566 15.305 57.886 1.00 94.40 O
ATOM 11 C2' G A 109 22.277 17.170 58.841 1.00100.15 C
ATOM 12 O2' G A 109 21.487 17.004 57.678 1.00 99.28 O
ATOM 13 C1' G A 109 21.394 16.920 60.061 1.00104.24 C
ATOM 14 N9 G A 109 20.829 18.099 60.711 1.00110.62 N
ATOM 15 C8 G A 109 21.465 18.998 61.540 1.00111.97 C
ATOM 16 N7 G A 109 20.665 19.921 62.006 1.00112.67 N
ATOM 17 C5 G A 109 19.431 19.621 61.441 1.00113.97 C
ATOM 18 C6 G A 109 18.179 20.264 61.582 1.00113.74 C
ATOM 19 O6 G A 109 17.896 21.260 62.260 1.00116.79 O
ATOM 20 N1 G A 109 17.191 19.627 60.835 1.00109.29 N
ATOM 21 C2 G A 109 17.384 18.512 60.059 1.00106.77 C
ATOM 22 N2 G A 109 16.299 18.031 59.443 1.00107.18 N
ATOM 23 N3 G A 109 18.548 17.909 59.908 1.00105.69 N
ATOM 24 C4 G A 109 19.520 18.509 60.628 1.00110.34 C
ATOM 25 P A A 110 24.987 14.652 57.505 1.00 97.03 P
ATOM 26 OP1 A A 110 26.077 15.549 57.971 1.00 95.05 O
ATOM 27 OP2 A A 110 24.937 14.230 56.083 1.00 92.08 O
ATOM 28 O5' A A 110 25.050 13.329 58.382 1.00 87.17 O
TER
ATOM 1 O3' C B 172 9.081 24.669 63.174 1.00112.52 O
ATOM 2 P C B 173 9.561 24.871 61.651 1.00114.93 P
ATOM 3 OP1 C B 173 9.684 26.328 61.401 1.00124.33 O
ATOM 4 OP2 C B 173 8.669 24.060 60.781 1.00115.18 O
ATOM 5 O5' C B 173 11.017 24.208 61.614 1.00122.21 O
ATOM 6 C5' C B 173 12.076 24.675 62.469 1.00121.79 C
ATOM 7 C4' C B 173 13.252 23.709 62.455 1.00116.96 C
ATOM 8 O4' C B 173 12.785 22.407 62.899 1.00115.78 O
ATOM 9 C3' C B 173 13.930 23.451 61.109 1.00115.41 C
ATOM 10 O3' C B 173 14.974 24.389 60.826 1.00115.44 O
ATOM 11 C2' C B 173 14.480 22.042 61.278 1.00111.71 C
ATOM 12 O2' C B 173 15.701 22.024 61.979 1.00109.95 O
ATOM 13 C1' C B 173 13.391 21.386 62.127 1.00111.42 C
ATOM 14 N1 C B 173 12.338 20.784 61.285 1.00113.63 N
ATOM 15 C2 C B 173 12.673 19.761 60.381 1.00115.19 C
ATOM 16 O2 C B 173 13.852 19.370 60.311 1.00114.52 O
ATOM 17 N3 C B 173 11.701 19.230 59.600 1.00114.42 N
ATOM 18 C4 C B 173 10.447 19.681 59.694 1.00115.37 C
ATOM 19 N4 C B 173 9.518 19.127 58.906 1.00114.17 N
ATOM 20 C5 C B 173 10.085 20.715 60.600 1.00116.68 C
ATOM 21 C6 C B 173 11.049 21.227 61.372 1.00115.07 C
ATOM 22 P U B 174 15.662 24.423 59.362 1.00116.84 P
ATOM 23 OP1 U B 174 16.312 25.749 59.207 1.00115.76 O
ATOM 24 OP2 U B 174 14.677 23.968 58.335 1.00103.18 O
ATOM 25 O5' U B 174 16.822 23.331 59.463 1.00107.41 O
TER
ATOM 2 P G A 109 26.055 16.113 62.429 1.00 88.58 P
ATOM 3 OP1 G A 109 26.166 17.451 63.054 1.00 87.53 O
ATOM 4 OP2 G A 109 26.602 14.925 63.139 1.00 88.25 O
ATOM 5 O5' G A 109 24.526 15.852 62.067 1.00 93.79 O
ATOM 6 C5' G A 109 24.146 14.832 61.136 1.00 90.68 C
ATOM 7 C4' G A 109 23.030 15.330 60.241 1.00 88.68 C
ATOM 8 O4' G A 109 22.166 16.203 60.988 1.00 97.43 O
ATOM 9 C3' G A 109 23.439 16.165 59.029 1.00 92.22 C
ATOM 10 O3' G A 109 23.566 15.305 57.886 1.00 94.40 O
ATOM 11 C2' G A 109 22.277 17.170 58.841 1.00100.15 C
ATOM 12 O2' G A 109 21.487 17.004 57.678 1.00 99.28 O
ATOM 13 C1' G A 109 21.394 16.920 60.061 1.00104.24 C
ATOM 14 N9 G A 109 20.829 18.099 60.711 1.00110.62 N
ATOM 15 C8 G A 109 21.465 18.998 61.540 1.00111.97 C
ATOM 16 N7 G A 109 20.665 19.921 62.006 1.00112.67 N
ATOM 17 C5 G A 109 19.431 19.621 61.441 1.00113.97 C
ATOM 18 C6 G A 109 18.179 20.264 61.582 1.00113.74 C
ATOM 19 O6 G A 109 17.896 21.260 62.260 1.00116.79 O
ATOM 20 N1 G A 109 17.191 19.627 60.835 1.00109.29 N
ATOM 21 C2 G A 109 17.384 18.512 60.059 1.00106.77 C
ATOM 22 N2 G A 109 16.299 18.031 59.443 1.00107.18 N
ATOM 23 N3 G A 109 18.548 17.909 59.908 1.00105.69 N
ATOM 24 C4 G A 109 19.520 18.509 60.628 1.00110.34 C
ATOM 25 P A A 110 24.987 14.652 57.505 1.00 97.03 P
ATOM 26 OP1 A A 110 26.077 15.549 57.971 1.00 95.05 O
ATOM 27 OP2 A A 110 24.937 14.230 56.083 1.00 92.08 O
ATOM 28 O5' A A 110 25.050 13.329 58.382 1.00 87.17 O
TER
ATOM 1 O3' C B 172 9.081 24.669 63.174 1.00112.52 O
ATOM 2 P C B 173 9.561 24.871 61.651 1.00114.93 P
ATOM 3 OP1 C B 173 9.684 26.328 61.401 1.00124.33 O
ATOM 4 OP2 C B 173 8.669 24.060 60.781 1.00115.18 O
ATOM 5 O5' C B 173 11.017 24.208 61.614 1.00122.21 O
ATOM 6 C5' C B 173 12.076 24.675 62.469 1.00121.79 C
ATOM 7 C4' C B 173 13.252 23.709 62.455 1.00116.96 C
ATOM 8 O4' C B 173 12.785 22.407 62.899 1.00115.78 O
ATOM 9 C3' C B 173 13.930 23.451 61.109 1.00115.41 C
ATOM 10 O3' C B 173 14.974 24.389 60.826 1.00115.44 O
ATOM 11 C2' C B 173 14.480 22.042 61.278 1.00111.71 C
ATOM 12 O2' C B 173 15.701 22.024 61.979 1.00109.95 O
ATOM 13 C1' C B 173 13.391 21.386 62.127 1.00111.42 C
ATOM 14 N1 C B 173 12.338 20.784 61.285 1.00113.63 N
ATOM 15 C2 C B 173 12.673 19.761 60.381 1.00115.19 C
ATOM 16 O2 C B 173 13.852 19.370 60.311 1.00114.52 O
ATOM 17 N3 C B 173 11.701 19.230 59.600 1.00114.42 N
ATOM 18 C4 C B 173 10.447 19.681 59.694 1.00115.37 C
ATOM 19 N4 C B 173 9.518 19.127 58.906 1.00114.17 N
ATOM 20 C5 C B 173 10.085 20.715 60.600 1.00116.68 C
ATOM 21 C6 C B 173 11.049 21.227 61.372 1.00115.07 C
ATOM 22 P U B 174 15.662 24.423 59.362 1.00116.84 P
ATOM 23 OP1 U B 174 16.312 25.749 59.207 1.00115.76 O
ATOM 24 OP2 U B 174 14.677 23.968 58.335 1.00103.18 O
ATOM 25 O5' U B 174 16.822 23.331 59.463 1.00107.41 O
TER
Atoms:
OP1: (26.166,17.451,63.054)
OP2: (26.602,14.925,63.139)
C3': (23.439,16.165,59.029)
C1': (21.394,16.920,60.061)
C5': (24.146,14.832,61.136)
O6: (17.896,21.260,62.260)
O4': (22.166,16.203,60.988)
C8: (21.465,18.998,61.540)
C2: (17.384,18.512,60.059)
C6: (18.179,20.264,61.582)
C5: (19.431,19.621,61.441)
C4: (19.520,18.509,60.628)
P: (26.055,16.113,62.429)
C4': (23.030,15.330,60.241)
C2': (22.277,17.170,58.841)
O2': (21.487,17.004,57.678)
N1: (17.191,19.627,60.835)
N2: (16.299,18.031,59.443)
N3: (18.548,17.909,59.908)
N7: (20.665,19.921,62.006)
N9: (20.829,18.099,60.711)
O5': (24.526,15.852,62.067)
O3': (23.566,15.305,57.886)
OP2: (26.602,14.925,63.139)
C3': (23.439,16.165,59.029)
C1': (21.394,16.920,60.061)
C5': (24.146,14.832,61.136)
O6: (17.896,21.260,62.260)
O4': (22.166,16.203,60.988)
C8: (21.465,18.998,61.540)
C2: (17.384,18.512,60.059)
C6: (18.179,20.264,61.582)
C5: (19.431,19.621,61.441)
C4: (19.520,18.509,60.628)
P: (26.055,16.113,62.429)
C4': (23.030,15.330,60.241)
C2': (22.277,17.170,58.841)
O2': (21.487,17.004,57.678)
N1: (17.191,19.627,60.835)
N2: (16.299,18.031,59.443)
N3: (18.548,17.909,59.908)
N7: (20.665,19.921,62.006)
N9: (20.829,18.099,60.711)
O5': (24.526,15.852,62.067)
O3': (23.566,15.305,57.886)
C2: (12.673,19.761,60.381)
OP1: (9.684,26.328,61.401)
OP2: (8.669,24.060,60.781)
C4: (10.447,19.681,59.694)
O5': (11.017,24.208,61.614)
C3': (13.930,23.451,61.109)
C1': (13.391,21.386,62.127)
O4': (12.785,22.407,62.899)
C5': (12.076,24.675,62.469)
P: (9.561,24.871,61.651)
O2: (13.852,19.370,60.311)
C4': (13.252,23.709,62.455)
C2': (14.480,22.042,61.278)
O2': (15.701,22.024,61.979)
N1: (12.338,20.784,61.285)
N3: (11.701,19.230,59.600)
N4: (9.518,19.127,58.906)
C6: (11.049,21.227,61.372)
C5: (10.085,20.715,60.600)
O3': (14.974,24.389,60.826)
OP1: (9.684,26.328,61.401)
OP2: (8.669,24.060,60.781)
C4: (10.447,19.681,59.694)
O5': (11.017,24.208,61.614)
C3': (13.930,23.451,61.109)
C1': (13.391,21.386,62.127)
O4': (12.785,22.407,62.899)
C5': (12.076,24.675,62.469)
P: (9.561,24.871,61.651)
O2: (13.852,19.370,60.311)
C4': (13.252,23.709,62.455)
C2': (14.480,22.042,61.278)
O2': (15.701,22.024,61.979)
N1: (12.338,20.784,61.285)
N3: (11.701,19.230,59.600)
N4: (9.518,19.127,58.906)
C6: (11.049,21.227,61.372)
C5: (10.085,20.715,60.600)
O3': (14.974,24.389,60.826)
Image (generated by PyMOL):