Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21234:21233
Extra
PDB:
ATOM 1 O3' U A1233 -58.131 -43.483 -11.152 1.00120.57 O
ATOM 2 P C A1234 -58.735 -43.074 -12.566 1.00107.28 P
ATOM 3 OP1 C A1234 -58.018 -43.884 -13.589 1.00107.69 O
ATOM 4 OP2 C A1234 -58.682 -41.593 -12.657 1.00107.46 O
ATOM 5 O5' C A1234 -60.251 -43.557 -12.447 1.00107.50 O
ATOM 6 C5' C A1234 -61.191 -42.846 -11.659 1.00107.30 C
ATOM 7 C4' C A1234 -61.920 -43.771 -10.722 1.00106.84 C
ATOM 8 O4' C A1234 -61.067 -44.101 -9.604 1.00105.97 O
ATOM 9 C3' C A1234 -63.167 -43.212 -10.075 1.00106.81 C
ATOM 10 O3' C A1234 -64.296 -43.293 -10.920 1.00107.59 O
ATOM 11 C2' C A1234 -63.294 -44.046 -8.805 1.00106.05 C
ATOM 12 O2' C A1234 -63.865 -45.312 -9.089 1.00106.27 O
ATOM 13 C1' C A1234 -61.835 -44.260 -8.433 1.00105.47 C
ATOM 14 N1 C A1234 -61.362 -43.286 -7.431 1.00104.87 N
ATOM 15 C2 C A1234 -61.663 -43.443 -6.072 1.00104.18 C
ATOM 16 O2 C A1234 -62.350 -44.409 -5.694 1.00104.08 O
ATOM 17 N3 C A1234 -61.189 -42.510 -5.207 1.00103.66 N
ATOM 18 C4 C A1234 -60.445 -41.482 -5.640 1.00103.79 C
ATOM 19 N4 C A1234 -59.984 -40.587 -4.764 1.00103.27 N
ATOM 20 C5 C A1234 -60.126 -41.316 -7.008 1.00104.49 C
ATOM 21 C6 C A1234 -60.598 -42.234 -7.851 1.00105.00 C
ATOM 22 P U A1235 -65.319 -42.070 -10.996 1.00111.12 P
ATOM 23 OP1 U A1235 -66.333 -42.409 -12.023 1.00111.99 O
ATOM 24 OP2 U A1235 -64.508 -40.833 -11.162 1.00111.12 O
ATOM 25 O5' U A1235 -65.983 -42.098 -9.556 1.00110.45 O
TER
ATOM 1 O3' U B1232 -51.520 -43.485 -9.140 1.00120.97 O
ATOM 2 P U B1233 -52.216 -43.931 -10.526 1.00119.17 P
ATOM 3 OP1 U B1233 -51.848 -45.349 -10.765 1.00119.19 O
ATOM 4 OP2 U B1233 -51.842 -42.918 -11.550 1.00119.79 O
ATOM 5 O5' U B1233 -53.774 -43.822 -10.214 1.00119.23 O
ATOM 6 C5' U B1233 -54.682 -44.717 -10.839 1.00119.68 C
ATOM 7 C4' U B1233 -56.103 -44.513 -10.391 1.00119.67 C
ATOM 8 O4' U B1233 -56.180 -44.516 -8.935 1.00118.86 O
ATOM 9 C3' U B1233 -56.769 -43.210 -10.849 1.00120.15 C
ATOM 10 O3' U B1233 -58.131 -43.483 -11.152 1.00120.57 O
ATOM 11 C2' U B1233 -56.721 -42.361 -9.589 1.00119.47 C
ATOM 12 O2' U B1233 -57.676 -41.320 -9.548 1.00119.71 O
ATOM 13 C1' U B1233 -56.996 -43.434 -8.545 1.00118.85 C
ATOM 14 N1 U B1233 -56.696 -43.054 -7.143 1.00118.03 N
ATOM 15 C2 U B1233 -57.688 -43.445 -6.264 1.00117.71 C
ATOM 16 O2 U B1233 -58.664 -44.070 -6.635 1.00118.08 O
ATOM 17 N3 U B1233 -57.488 -43.101 -4.955 1.00116.99 N
ATOM 18 C4 U B1233 -56.419 -42.409 -4.443 1.00116.55 C
ATOM 19 O4 U B1233 -56.381 -42.178 -3.231 1.00115.91 O
ATOM 20 C5 U B1233 -55.445 -42.029 -5.424 1.00116.92 C
ATOM 21 C6 U B1233 -55.600 -42.341 -6.714 1.00117.64 C
ATOM 22 P C B1234 -58.735 -43.074 -12.566 1.00107.28 P
ATOM 23 OP1 C B1234 -58.018 -43.884 -13.589 1.00107.69 O
ATOM 24 OP2 C B1234 -58.682 -41.593 -12.657 1.00107.46 O
ATOM 25 O5' C B1234 -60.251 -43.557 -12.447 1.00107.50 O
TER
ATOM 2 P C A1234 -58.735 -43.074 -12.566 1.00107.28 P
ATOM 3 OP1 C A1234 -58.018 -43.884 -13.589 1.00107.69 O
ATOM 4 OP2 C A1234 -58.682 -41.593 -12.657 1.00107.46 O
ATOM 5 O5' C A1234 -60.251 -43.557 -12.447 1.00107.50 O
ATOM 6 C5' C A1234 -61.191 -42.846 -11.659 1.00107.30 C
ATOM 7 C4' C A1234 -61.920 -43.771 -10.722 1.00106.84 C
ATOM 8 O4' C A1234 -61.067 -44.101 -9.604 1.00105.97 O
ATOM 9 C3' C A1234 -63.167 -43.212 -10.075 1.00106.81 C
ATOM 10 O3' C A1234 -64.296 -43.293 -10.920 1.00107.59 O
ATOM 11 C2' C A1234 -63.294 -44.046 -8.805 1.00106.05 C
ATOM 12 O2' C A1234 -63.865 -45.312 -9.089 1.00106.27 O
ATOM 13 C1' C A1234 -61.835 -44.260 -8.433 1.00105.47 C
ATOM 14 N1 C A1234 -61.362 -43.286 -7.431 1.00104.87 N
ATOM 15 C2 C A1234 -61.663 -43.443 -6.072 1.00104.18 C
ATOM 16 O2 C A1234 -62.350 -44.409 -5.694 1.00104.08 O
ATOM 17 N3 C A1234 -61.189 -42.510 -5.207 1.00103.66 N
ATOM 18 C4 C A1234 -60.445 -41.482 -5.640 1.00103.79 C
ATOM 19 N4 C A1234 -59.984 -40.587 -4.764 1.00103.27 N
ATOM 20 C5 C A1234 -60.126 -41.316 -7.008 1.00104.49 C
ATOM 21 C6 C A1234 -60.598 -42.234 -7.851 1.00105.00 C
ATOM 22 P U A1235 -65.319 -42.070 -10.996 1.00111.12 P
ATOM 23 OP1 U A1235 -66.333 -42.409 -12.023 1.00111.99 O
ATOM 24 OP2 U A1235 -64.508 -40.833 -11.162 1.00111.12 O
ATOM 25 O5' U A1235 -65.983 -42.098 -9.556 1.00110.45 O
TER
ATOM 1 O3' U B1232 -51.520 -43.485 -9.140 1.00120.97 O
ATOM 2 P U B1233 -52.216 -43.931 -10.526 1.00119.17 P
ATOM 3 OP1 U B1233 -51.848 -45.349 -10.765 1.00119.19 O
ATOM 4 OP2 U B1233 -51.842 -42.918 -11.550 1.00119.79 O
ATOM 5 O5' U B1233 -53.774 -43.822 -10.214 1.00119.23 O
ATOM 6 C5' U B1233 -54.682 -44.717 -10.839 1.00119.68 C
ATOM 7 C4' U B1233 -56.103 -44.513 -10.391 1.00119.67 C
ATOM 8 O4' U B1233 -56.180 -44.516 -8.935 1.00118.86 O
ATOM 9 C3' U B1233 -56.769 -43.210 -10.849 1.00120.15 C
ATOM 10 O3' U B1233 -58.131 -43.483 -11.152 1.00120.57 O
ATOM 11 C2' U B1233 -56.721 -42.361 -9.589 1.00119.47 C
ATOM 12 O2' U B1233 -57.676 -41.320 -9.548 1.00119.71 O
ATOM 13 C1' U B1233 -56.996 -43.434 -8.545 1.00118.85 C
ATOM 14 N1 U B1233 -56.696 -43.054 -7.143 1.00118.03 N
ATOM 15 C2 U B1233 -57.688 -43.445 -6.264 1.00117.71 C
ATOM 16 O2 U B1233 -58.664 -44.070 -6.635 1.00118.08 O
ATOM 17 N3 U B1233 -57.488 -43.101 -4.955 1.00116.99 N
ATOM 18 C4 U B1233 -56.419 -42.409 -4.443 1.00116.55 C
ATOM 19 O4 U B1233 -56.381 -42.178 -3.231 1.00115.91 O
ATOM 20 C5 U B1233 -55.445 -42.029 -5.424 1.00116.92 C
ATOM 21 C6 U B1233 -55.600 -42.341 -6.714 1.00117.64 C
ATOM 22 P C B1234 -58.735 -43.074 -12.566 1.00107.28 P
ATOM 23 OP1 C B1234 -58.018 -43.884 -13.589 1.00107.69 O
ATOM 24 OP2 C B1234 -58.682 -41.593 -12.657 1.00107.46 O
ATOM 25 O5' C B1234 -60.251 -43.557 -12.447 1.00107.50 O
TER
Atoms:
C2: (-61.663,-43.443,-6.072)
OP1: (-58.018,-43.884,-13.589)
OP2: (-58.682,-41.593,-12.657)
C4: (-60.445,-41.482,-5.640)
O5': (-60.251,-43.557,-12.447)
C3': (-63.167,-43.212,-10.075)
C1': (-61.835,-44.260,-8.433)
O4': (-61.067,-44.101,-9.604)
C5': (-61.191,-42.846,-11.659)
P: (-58.735,-43.074,-12.566)
O2: (-62.350,-44.409,-5.694)
C4': (-61.920,-43.771,-10.722)
C2': (-63.294,-44.046,-8.805)
O2': (-63.865,-45.312,-9.089)
N1: (-61.362,-43.286,-7.431)
N3: (-61.189,-42.510,-5.207)
N4: (-59.984,-40.587,-4.764)
C6: (-60.598,-42.234,-7.851)
C5: (-60.126,-41.316,-7.008)
O3': (-64.296,-43.293,-10.920)
OP1: (-58.018,-43.884,-13.589)
OP2: (-58.682,-41.593,-12.657)
C4: (-60.445,-41.482,-5.640)
O5': (-60.251,-43.557,-12.447)
C3': (-63.167,-43.212,-10.075)
C1': (-61.835,-44.260,-8.433)
O4': (-61.067,-44.101,-9.604)
C5': (-61.191,-42.846,-11.659)
P: (-58.735,-43.074,-12.566)
O2: (-62.350,-44.409,-5.694)
C4': (-61.920,-43.771,-10.722)
C2': (-63.294,-44.046,-8.805)
O2': (-63.865,-45.312,-9.089)
N1: (-61.362,-43.286,-7.431)
N3: (-61.189,-42.510,-5.207)
N4: (-59.984,-40.587,-4.764)
C6: (-60.598,-42.234,-7.851)
C5: (-60.126,-41.316,-7.008)
O3': (-64.296,-43.293,-10.920)
C4: (-56.419,-42.409,-4.443)
N3: (-57.488,-43.101,-4.955)
OP1: (-51.848,-45.349,-10.765)
OP2: (-51.842,-42.918,-11.550)
C2: (-57.688,-43.445,-6.264)
C1': (-56.996,-43.434,-8.545)
C3': (-56.769,-43.210,-10.849)
O5': (-53.774,-43.822,-10.214)
O4': (-56.180,-44.516,-8.935)
C5': (-54.682,-44.717,-10.839)
P: (-52.216,-43.931,-10.526)
C4': (-56.103,-44.513,-10.391)
C2': (-56.721,-42.361,-9.589)
O2': (-57.676,-41.320,-9.548)
N1: (-56.696,-43.054,-7.143)
O4: (-56.381,-42.178,-3.231)
O2: (-58.664,-44.070,-6.635)
C6: (-55.600,-42.341,-6.714)
C5: (-55.445,-42.029,-5.424)
O3': (-58.131,-43.483,-11.152)
N3: (-57.488,-43.101,-4.955)
OP1: (-51.848,-45.349,-10.765)
OP2: (-51.842,-42.918,-11.550)
C2: (-57.688,-43.445,-6.264)
C1': (-56.996,-43.434,-8.545)
C3': (-56.769,-43.210,-10.849)
O5': (-53.774,-43.822,-10.214)
O4': (-56.180,-44.516,-8.935)
C5': (-54.682,-44.717,-10.839)
P: (-52.216,-43.931,-10.526)
C4': (-56.103,-44.513,-10.391)
C2': (-56.721,-42.361,-9.589)
O2': (-57.676,-41.320,-9.548)
N1: (-56.696,-43.054,-7.143)
O4: (-56.381,-42.178,-3.231)
O2: (-58.664,-44.070,-6.635)
C6: (-55.600,-42.341,-6.714)
C5: (-55.445,-42.029,-5.424)
O3': (-58.131,-43.483,-11.152)
Image (generated by PyMOL):