Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21486:21531
Extra
PDB:
ATOM 1 O3' A A1485 -70.881 -90.305 42.070 1.00 97.34 O
ATOM 2 P G A1486 -71.818 -89.145 41.469 1.00 89.24 P
ATOM 3 OP1 G A1486 -73.105 -89.178 42.220 1.00 89.64 O
ATOM 4 OP2 G A1486 -71.847 -89.332 40.003 1.00 89.21 O
ATOM 5 O5' G A1486 -71.021 -87.814 41.822 1.00 88.53 O
ATOM 6 C5' G A1486 -70.915 -87.356 43.161 1.00 88.43 C
ATOM 7 C4' G A1486 -69.840 -86.307 43.306 1.00 87.76 C
ATOM 8 O4' G A1486 -68.603 -86.777 42.722 1.00 87.63 O
ATOM 9 C3' G A1486 -70.115 -84.987 42.617 1.00 87.24 C
ATOM 10 O3' G A1486 -70.908 -84.139 43.424 1.00 87.15 O
ATOM 11 C2' G A1486 -68.711 -84.437 42.346 1.00 86.68 C
ATOM 12 O2' G A1486 -68.166 -83.816 43.508 1.00 86.40 O
ATOM 13 C1' G A1486 -67.928 -85.715 42.084 1.00 87.00 C
ATOM 14 N9 G A1486 -67.811 -86.030 40.646 1.00 87.00 N
ATOM 15 C8 G A1486 -68.538 -86.985 39.997 1.00 87.50 C
ATOM 16 N7 G A1486 -68.220 -87.098 38.745 1.00 87.41 N
ATOM 17 C5 G A1486 -67.199 -86.178 38.545 1.00 86.82 C
ATOM 18 C6 G A1486 -66.459 -85.855 37.373 1.00 86.50 C
ATOM 19 O6 G A1486 -66.510 -86.294 36.220 1.00 86.65 O
ATOM 20 N1 G A1486 -65.544 -84.860 37.631 1.00 85.95 N
ATOM 21 C2 G A1486 -65.331 -84.252 38.832 1.00 85.72 C
ATOM 22 N2 G A1486 -64.359 -83.333 38.810 1.00 85.19 N
ATOM 23 N3 G A1486 -66.005 -84.545 39.936 1.00 86.01 N
ATOM 24 C4 G A1486 -66.929 -85.511 39.720 1.00 86.56 C
ATOM 25 P A A1487 -72.195 -83.397 42.835 1.00 97.73 P
ATOM 26 OP1 A A1487 -72.893 -82.780 44.007 1.00 97.76 O
ATOM 27 OP2 A A1487 -72.924 -84.386 41.983 1.00 98.24 O
ATOM 28 O5' A A1487 -71.557 -82.249 41.929 1.00 97.07 O
TER
ATOM 1 O3' G B1530 -56.901 -83.832 33.118 1.00 91.78 O
ATOM 2 P C B1531 -57.666 -82.697 32.289 1.00 86.59 P
ATOM 3 OP1 C B1531 -57.529 -83.055 30.850 1.00 86.75 O
ATOM 4 OP2 C B1531 -57.156 -81.387 32.753 1.00 86.05 O
ATOM 5 O5' C B1531 -59.163 -82.867 32.767 1.00 86.82 O
ATOM 6 C5' C B1531 -59.733 -84.150 32.920 1.00 87.36 C
ATOM 7 C4' C B1531 -60.953 -84.100 33.798 1.00 87.50 C
ATOM 8 O4' C B1531 -60.589 -83.640 35.114 1.00 87.27 O
ATOM 9 C3' C B1531 -62.040 -83.143 33.370 1.00 87.31 C
ATOM 10 O3' C B1531 -62.843 -83.685 32.355 1.00 87.66 O
ATOM 11 C2' C B1531 -62.795 -82.893 34.665 1.00 87.33 C
ATOM 12 O2' C B1531 -63.671 -83.963 34.932 1.00 87.87 O
ATOM 13 C1' C B1531 -61.676 -82.954 35.693 1.00 87.18 C
ATOM 14 N1 C B1531 -61.223 -81.623 36.118 1.00 86.62 N
ATOM 15 C2 C B1531 -61.896 -81.010 37.184 1.00 86.51 C
ATOM 16 O2 C B1531 -62.867 -81.568 37.728 1.00 86.88 O
ATOM 17 N3 C B1531 -61.475 -79.801 37.588 1.00 86.01 N
ATOM 18 C4 C B1531 -60.437 -79.231 36.989 1.00 85.65 C
ATOM 19 N4 C B1531 -60.071 -78.037 37.440 1.00 85.17 N
ATOM 20 C5 C B1531 -59.745 -79.841 35.914 1.00 85.77 C
ATOM 21 C6 C B1531 -60.156 -81.035 35.511 1.00 86.25 C
ATOM 22 P A B1532 -63.572 -82.721 31.319 1.00 84.50 P
ATOM 23 OP1 A B1532 -64.019 -83.559 30.171 1.00 84.92 O
ATOM 24 OP2 A B1532 -62.632 -81.569 31.070 1.00 83.96 O
ATOM 25 O5' A B1532 -64.835 -82.228 32.142 1.00 84.53 O
TER
ATOM 2 P G A1486 -71.818 -89.145 41.469 1.00 89.24 P
ATOM 3 OP1 G A1486 -73.105 -89.178 42.220 1.00 89.64 O
ATOM 4 OP2 G A1486 -71.847 -89.332 40.003 1.00 89.21 O
ATOM 5 O5' G A1486 -71.021 -87.814 41.822 1.00 88.53 O
ATOM 6 C5' G A1486 -70.915 -87.356 43.161 1.00 88.43 C
ATOM 7 C4' G A1486 -69.840 -86.307 43.306 1.00 87.76 C
ATOM 8 O4' G A1486 -68.603 -86.777 42.722 1.00 87.63 O
ATOM 9 C3' G A1486 -70.115 -84.987 42.617 1.00 87.24 C
ATOM 10 O3' G A1486 -70.908 -84.139 43.424 1.00 87.15 O
ATOM 11 C2' G A1486 -68.711 -84.437 42.346 1.00 86.68 C
ATOM 12 O2' G A1486 -68.166 -83.816 43.508 1.00 86.40 O
ATOM 13 C1' G A1486 -67.928 -85.715 42.084 1.00 87.00 C
ATOM 14 N9 G A1486 -67.811 -86.030 40.646 1.00 87.00 N
ATOM 15 C8 G A1486 -68.538 -86.985 39.997 1.00 87.50 C
ATOM 16 N7 G A1486 -68.220 -87.098 38.745 1.00 87.41 N
ATOM 17 C5 G A1486 -67.199 -86.178 38.545 1.00 86.82 C
ATOM 18 C6 G A1486 -66.459 -85.855 37.373 1.00 86.50 C
ATOM 19 O6 G A1486 -66.510 -86.294 36.220 1.00 86.65 O
ATOM 20 N1 G A1486 -65.544 -84.860 37.631 1.00 85.95 N
ATOM 21 C2 G A1486 -65.331 -84.252 38.832 1.00 85.72 C
ATOM 22 N2 G A1486 -64.359 -83.333 38.810 1.00 85.19 N
ATOM 23 N3 G A1486 -66.005 -84.545 39.936 1.00 86.01 N
ATOM 24 C4 G A1486 -66.929 -85.511 39.720 1.00 86.56 C
ATOM 25 P A A1487 -72.195 -83.397 42.835 1.00 97.73 P
ATOM 26 OP1 A A1487 -72.893 -82.780 44.007 1.00 97.76 O
ATOM 27 OP2 A A1487 -72.924 -84.386 41.983 1.00 98.24 O
ATOM 28 O5' A A1487 -71.557 -82.249 41.929 1.00 97.07 O
TER
ATOM 1 O3' G B1530 -56.901 -83.832 33.118 1.00 91.78 O
ATOM 2 P C B1531 -57.666 -82.697 32.289 1.00 86.59 P
ATOM 3 OP1 C B1531 -57.529 -83.055 30.850 1.00 86.75 O
ATOM 4 OP2 C B1531 -57.156 -81.387 32.753 1.00 86.05 O
ATOM 5 O5' C B1531 -59.163 -82.867 32.767 1.00 86.82 O
ATOM 6 C5' C B1531 -59.733 -84.150 32.920 1.00 87.36 C
ATOM 7 C4' C B1531 -60.953 -84.100 33.798 1.00 87.50 C
ATOM 8 O4' C B1531 -60.589 -83.640 35.114 1.00 87.27 O
ATOM 9 C3' C B1531 -62.040 -83.143 33.370 1.00 87.31 C
ATOM 10 O3' C B1531 -62.843 -83.685 32.355 1.00 87.66 O
ATOM 11 C2' C B1531 -62.795 -82.893 34.665 1.00 87.33 C
ATOM 12 O2' C B1531 -63.671 -83.963 34.932 1.00 87.87 O
ATOM 13 C1' C B1531 -61.676 -82.954 35.693 1.00 87.18 C
ATOM 14 N1 C B1531 -61.223 -81.623 36.118 1.00 86.62 N
ATOM 15 C2 C B1531 -61.896 -81.010 37.184 1.00 86.51 C
ATOM 16 O2 C B1531 -62.867 -81.568 37.728 1.00 86.88 O
ATOM 17 N3 C B1531 -61.475 -79.801 37.588 1.00 86.01 N
ATOM 18 C4 C B1531 -60.437 -79.231 36.989 1.00 85.65 C
ATOM 19 N4 C B1531 -60.071 -78.037 37.440 1.00 85.17 N
ATOM 20 C5 C B1531 -59.745 -79.841 35.914 1.00 85.77 C
ATOM 21 C6 C B1531 -60.156 -81.035 35.511 1.00 86.25 C
ATOM 22 P A B1532 -63.572 -82.721 31.319 1.00 84.50 P
ATOM 23 OP1 A B1532 -64.019 -83.559 30.171 1.00 84.92 O
ATOM 24 OP2 A B1532 -62.632 -81.569 31.070 1.00 83.96 O
ATOM 25 O5' A B1532 -64.835 -82.228 32.142 1.00 84.53 O
TER
Atoms:
OP1: (-73.105,-89.178,42.220)
OP2: (-71.847,-89.332,40.003)
C3': (-70.115,-84.987,42.617)
C1': (-67.928,-85.715,42.084)
C5': (-70.915,-87.356,43.161)
O6: (-66.510,-86.294,36.220)
O4': (-68.603,-86.777,42.722)
C8: (-68.538,-86.985,39.997)
C2: (-65.331,-84.252,38.832)
C6: (-66.459,-85.855,37.373)
C5: (-67.199,-86.178,38.545)
C4: (-66.929,-85.511,39.720)
P: (-71.818,-89.145,41.469)
C4': (-69.840,-86.307,43.306)
C2': (-68.711,-84.437,42.346)
O2': (-68.166,-83.816,43.508)
N1: (-65.544,-84.860,37.631)
N2: (-64.359,-83.333,38.810)
N3: (-66.005,-84.545,39.936)
N7: (-68.220,-87.098,38.745)
N9: (-67.811,-86.030,40.646)
O5': (-71.021,-87.814,41.822)
O3': (-70.908,-84.139,43.424)
OP2: (-71.847,-89.332,40.003)
C3': (-70.115,-84.987,42.617)
C1': (-67.928,-85.715,42.084)
C5': (-70.915,-87.356,43.161)
O6: (-66.510,-86.294,36.220)
O4': (-68.603,-86.777,42.722)
C8: (-68.538,-86.985,39.997)
C2: (-65.331,-84.252,38.832)
C6: (-66.459,-85.855,37.373)
C5: (-67.199,-86.178,38.545)
C4: (-66.929,-85.511,39.720)
P: (-71.818,-89.145,41.469)
C4': (-69.840,-86.307,43.306)
C2': (-68.711,-84.437,42.346)
O2': (-68.166,-83.816,43.508)
N1: (-65.544,-84.860,37.631)
N2: (-64.359,-83.333,38.810)
N3: (-66.005,-84.545,39.936)
N7: (-68.220,-87.098,38.745)
N9: (-67.811,-86.030,40.646)
O5': (-71.021,-87.814,41.822)
O3': (-70.908,-84.139,43.424)
C2: (-61.896,-81.010,37.184)
OP1: (-57.529,-83.055,30.850)
OP2: (-57.156,-81.387,32.753)
C4: (-60.437,-79.231,36.989)
O5': (-59.163,-82.867,32.767)
C3': (-62.040,-83.143,33.370)
C1': (-61.676,-82.954,35.693)
O4': (-60.589,-83.640,35.114)
C5': (-59.733,-84.150,32.920)
P: (-57.666,-82.697,32.289)
O2: (-62.867,-81.568,37.728)
C4': (-60.953,-84.100,33.798)
C2': (-62.795,-82.893,34.665)
O2': (-63.671,-83.963,34.932)
N1: (-61.223,-81.623,36.118)
N3: (-61.475,-79.801,37.588)
N4: (-60.071,-78.037,37.440)
C6: (-60.156,-81.035,35.511)
C5: (-59.745,-79.841,35.914)
O3': (-62.843,-83.685,32.355)
OP1: (-57.529,-83.055,30.850)
OP2: (-57.156,-81.387,32.753)
C4: (-60.437,-79.231,36.989)
O5': (-59.163,-82.867,32.767)
C3': (-62.040,-83.143,33.370)
C1': (-61.676,-82.954,35.693)
O4': (-60.589,-83.640,35.114)
C5': (-59.733,-84.150,32.920)
P: (-57.666,-82.697,32.289)
O2: (-62.867,-81.568,37.728)
C4': (-60.953,-84.100,33.798)
C2': (-62.795,-82.893,34.665)
O2': (-63.671,-83.963,34.932)
N1: (-61.223,-81.623,36.118)
N3: (-61.475,-79.801,37.588)
N4: (-60.071,-78.037,37.440)
C6: (-60.156,-81.035,35.511)
C5: (-59.745,-79.841,35.914)
O3': (-62.843,-83.685,32.355)
Image (generated by PyMOL):