ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1GID:B49:B121

Extra

PDB:
ATOM 1 O3' A A 48 56.604 79.236 44.237 1.00 39.88 O
ATOM 2 P A A 49 57.626 79.201 45.481 1.00 40.68 P
ATOM 3 OP1 A A 49 57.933 80.569 45.958 1.00 35.07 O
ATOM 4 OP2 A A 49 58.732 78.271 45.138 1.00 39.10 O
ATOM 5 O5' A A 49 56.789 78.459 46.603 1.00 41.70 O
ATOM 6 C5' A A 49 55.598 79.035 47.106 1.00 37.23 C
ATOM 7 C4' A A 49 54.663 77.953 47.574 1.00 34.59 C
ATOM 8 O4' A A 49 54.529 76.994 46.507 1.00 35.29 O
ATOM 9 C3' A A 49 55.155 77.096 48.720 1.00 35.07 C
ATOM 10 O3' A A 49 54.921 77.759 49.955 1.00 33.65 O
ATOM 11 C2' A A 49 54.303 75.841 48.560 1.00 33.88 C
ATOM 12 O2' A A 49 53.010 75.990 49.091 1.00 32.42 O
ATOM 13 C1' A A 49 54.201 75.735 47.040 1.00 31.52 C
ATOM 14 N9 A A 49 55.115 74.788 46.429 1.00 27.68 N
ATOM 15 C8 A A 49 56.350 75.059 45.915 1.00 24.80 C
ATOM 16 N7 A A 49 56.942 74.016 45.398 1.00 25.31 N
ATOM 17 C5 A A 49 56.033 72.987 45.592 1.00 26.28 C
ATOM 18 C6 A A 49 56.063 71.626 45.278 1.00 27.09 C
ATOM 19 N6 A A 49 57.079 71.020 44.665 1.00 26.62 N
ATOM 20 N1 A A 49 54.997 70.885 45.623 1.00 29.56 N
ATOM 21 C2 A A 49 53.976 71.474 46.234 1.00 28.23 C
ATOM 22 N3 A A 49 53.829 72.738 46.584 1.00 30.53 N
ATOM 23 C4 A A 49 54.907 73.450 46.230 1.00 28.04 C
ATOM 24 P A A 50 55.865 77.449 51.197 1.00 30.19 P
ATOM 25 OP1 A A 50 55.470 78.395 52.274 1.00 24.88 O
ATOM 26 OP2 A A 50 57.269 77.399 50.753 1.00 34.23 O
ATOM 27 O5' A A 50 55.480 75.943 51.529 1.00 26.34 O
TER

ATOM 1 O3' C B 120 48.866 72.691 54.570 1.00 20.02 O
ATOM 2 P U B 121 47.976 73.346 53.445 1.00 19.49 P
ATOM 3 OP1 U B 121 47.688 74.759 53.771 1.00 19.35 O
ATOM 4 OP2 U B 121 46.876 72.388 53.240 1.00 19.11 O
ATOM 5 O5' U B 121 48.922 73.274 52.174 1.00 17.84 O
ATOM 6 C5' U B 121 49.924 74.241 51.973 1.00 15.58 C
ATOM 7 C4' U B 121 50.664 73.942 50.715 1.00 13.26 C
ATOM 8 O4' U B 121 50.964 72.542 50.736 1.00 14.58 O
ATOM 9 C3' U B 121 49.886 74.078 49.425 1.00 20.96 C
ATOM 10 O3' U B 121 49.902 75.435 49.032 1.00 25.97 O
ATOM 11 C2' U B 121 50.737 73.231 48.497 1.00 21.02 C
ATOM 12 O2' U B 121 51.934 73.902 48.139 1.00 20.97 O
ATOM 13 C1' U B 121 51.075 72.061 49.416 1.00 16.57 C
ATOM 14 N1 U B 121 50.172 70.918 49.276 1.00 21.43 N
ATOM 15 C2 U B 121 50.314 70.142 48.167 1.00 27.10 C
ATOM 16 O2 U B 121 51.154 70.359 47.336 1.00 33.18 O
ATOM 17 N3 U B 121 49.438 69.093 48.063 1.00 27.14 N
ATOM 18 C4 U B 121 48.453 68.748 48.953 1.00 24.16 C
ATOM 19 O4 U B 121 47.736 67.775 48.717 1.00 26.64 O
ATOM 20 C5 U B 121 48.371 69.599 50.092 1.00 19.58 C
ATOM 21 C6 U B 121 49.217 70.636 50.210 1.00 23.07 C
ATOM 22 P A B 122 48.559 76.129 48.528 1.00 26.78 P
ATOM 23 OP1 A B 122 48.809 77.589 48.602 1.00 26.06 O
ATOM 24 OP2 A B 122 47.356 75.546 49.152 1.00 25.58 O
ATOM 25 O5' A B 122 48.471 75.633 47.036 1.00 22.45 O
TER

Atoms:
OP1: (57.933,80.569,45.958)
OP2: (58.732,78.271,45.138)
C3': (55.155,77.096,48.720)
C1': (54.201,75.735,47.040)
C5': (55.598,79.035,47.106)
O4': (54.529,76.994,46.507)
C8: (56.350,75.059,45.915)
O2': (53.010,75.990,49.091)
C6: (56.063,71.626,45.278)
C5: (56.033,72.987,45.592)
C4: (54.907,73.450,46.230)
P: (57.626,79.201,45.481)
C4': (54.663,77.953,47.574)
C2': (54.303,75.841,48.560)
C2: (53.976,71.474,46.234)
N1: (54.997,70.885,45.623)
N3: (53.829,72.738,46.584)
N6: (57.079,71.020,44.665)
N7: (56.942,74.016,45.398)
N9: (55.115,74.788,46.429)
O5': (56.789,78.459,46.603)
O3': (54.921,77.759,49.955)
C4: (48.453,68.748,48.953)
N3: (49.438,69.093,48.063)
OP1: (47.688,74.759,53.771)
OP2: (46.876,72.388,53.240)
C2: (50.314,70.142,48.167)
C1': (51.075,72.061,49.416)
C3': (49.886,74.078,49.425)
O5': (48.922,73.274,52.174)
O4': (50.964,72.542,50.736)
C5': (49.924,74.241,51.973)
P: (47.976,73.346,53.445)
C4': (50.664,73.942,50.715)
C2': (50.737,73.231,48.497)
O2': (51.934,73.902,48.139)
N1: (50.172,70.918,49.276)
O4: (47.736,67.775,48.717)
O2: (51.154,70.359,47.336)
C6: (49.217,70.636,50.210)
C5: (48.371,69.599,50.092)
O3': (49.902,75.435,49.032)
Image (generated by PyMOL):
PyMOL image
show in jmol