ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A1511:A1301

Extra

PDB:
ATOM 1 O3' A A1510 31.532 -18.667 -31.839 1.00 40.83 O
ATOM 2 P A A1511 30.209 -18.107 -32.528 1.00 45.46 P
ATOM 3 OP1 A A1511 30.545 -16.777 -33.151 1.00 35.35 O
ATOM 4 OP2 A A1511 29.134 -18.162 -31.493 1.00 35.41 O
ATOM 5 O5' A A1511 29.958 -19.186 -33.670 1.00 31.97 O
ATOM 6 C5' A A1511 30.881 -19.320 -34.743 1.00 31.94 C
ATOM 7 C4' A A1511 30.745 -20.654 -35.436 1.00 33.55 C
ATOM 8 O4' A A1511 30.743 -21.717 -34.458 1.00 40.97 O
ATOM 9 C3' A A1511 29.461 -20.854 -36.198 1.00 39.21 C
ATOM 10 O3' A A1511 29.521 -20.290 -37.488 1.00 38.49 O
ATOM 11 C2' A A1511 29.265 -22.366 -36.197 1.00 35.95 C
ATOM 12 O2' A A1511 30.031 -22.962 -37.240 1.00 46.17 O
ATOM 13 C1' A A1511 29.890 -22.760 -34.865 1.00 32.73 C
ATOM 14 N9 A A1511 28.911 -23.008 -33.782 1.00 31.52 N
ATOM 15 C8 A A1511 28.631 -22.122 -32.756 1.00 32.83 C
ATOM 16 N7 A A1511 27.796 -22.586 -31.849 1.00 30.09 N
ATOM 17 C5 A A1511 27.555 -23.877 -32.291 1.00 24.14 C
ATOM 18 C6 A A1511 26.762 -24.862 -31.744 1.00 26.81 C
ATOM 19 N6 A A1511 26.071 -24.639 -30.619 1.00 33.25 N
ATOM 20 N1 A A1511 26.712 -26.045 -32.385 1.00 25.65 N
ATOM 21 C2 A A1511 27.421 -26.168 -33.501 1.00 24.97 C
ATOM 22 N3 A A1511 28.206 -25.306 -34.114 1.00 24.36 N
ATOM 23 C4 A A1511 28.237 -24.167 -33.449 1.00 24.29 C
ATOM 24 P A A1512 28.287 -19.423 -38.018 1.00 47.56 P
ATOM 25 OP1 A A1512 28.783 -18.653 -39.194 1.00 30.12 O
ATOM 26 OP2 A A1512 27.716 -18.674 -36.840 1.00 44.16 O
ATOM 27 O5' A A1512 27.261 -20.545 -38.473 1.00 35.83 O
TER

ATOM 1 O3' C B1300 25.388 -27.494 -40.653 1.00 30.90 O
ATOM 2 P U B1301 26.419 -27.990 -41.755 1.00 48.54 P
ATOM 3 OP1 U B1301 26.353 -27.036 -42.888 1.00 48.12 O
ATOM 4 OP2 U B1301 26.113 -29.415 -42.012 1.00 43.30 O
ATOM 5 O5' U B1301 27.821 -27.860 -40.998 1.00 48.73 O
ATOM 6 C5' U B1301 28.420 -26.591 -40.759 1.00 37.74 C
ATOM 7 C4' U B1301 28.627 -26.329 -39.285 1.00 36.40 C
ATOM 8 O4' U B1301 27.673 -27.083 -38.504 1.00 37.67 O
ATOM 9 C3' U B1301 29.971 -26.731 -38.687 1.00 34.36 C
ATOM 10 O3' U B1301 30.987 -25.789 -38.961 1.00 43.52 O
ATOM 11 C2' U B1301 29.633 -26.803 -37.215 1.00 37.01 C
ATOM 12 O2' U B1301 29.502 -25.486 -36.676 1.00 35.61 O
ATOM 13 C1' U B1301 28.251 -27.432 -37.265 1.00 34.16 C
ATOM 14 N1 U B1301 28.308 -28.893 -37.175 1.00 33.19 N
ATOM 15 C2 U B1301 28.514 -29.449 -35.957 1.00 28.94 C
ATOM 16 O2 U B1301 28.676 -28.780 -34.977 1.00 32.56 O
ATOM 17 N3 U B1301 28.536 -30.805 -35.929 1.00 30.35 N
ATOM 18 C4 U B1301 28.360 -31.650 -36.999 1.00 37.65 C
ATOM 19 O4 U B1301 28.400 -32.866 -36.862 1.00 45.91 O
ATOM 20 C5 U B1301 28.143 -31.003 -38.234 1.00 39.80 C
ATOM 21 C6 U B1301 28.126 -29.675 -38.274 1.00 40.98 C
ATOM 22 P A B1302 32.539 -26.196 -38.896 1.00 36.62 P
ATOM 23 OP1 A B1302 33.303 -24.942 -39.152 1.00 34.11 O
ATOM 24 OP2 A B1302 32.739 -27.349 -39.803 1.00 29.12 O
ATOM 25 O5' A B1302 32.730 -26.659 -37.383 1.00 34.57 O
TER

Atoms:
OP1: (30.545,-16.777,-33.151)
OP2: (29.134,-18.162,-31.493)
C3': (29.461,-20.854,-36.198)
C1': (29.890,-22.760,-34.865)
C5': (30.881,-19.320,-34.743)
O4': (30.743,-21.717,-34.458)
C8: (28.631,-22.122,-32.756)
O2': (30.031,-22.962,-37.240)
C6: (26.762,-24.862,-31.744)
C5: (27.555,-23.877,-32.291)
C4: (28.237,-24.167,-33.449)
P: (30.209,-18.107,-32.528)
C4': (30.745,-20.654,-35.436)
C2': (29.265,-22.366,-36.197)
C2: (27.421,-26.168,-33.501)
N1: (26.712,-26.045,-32.385)
N3: (28.206,-25.306,-34.114)
N6: (26.071,-24.639,-30.619)
N7: (27.796,-22.586,-31.849)
N9: (28.911,-23.008,-33.782)
O5': (29.958,-19.186,-33.670)
O3': (29.521,-20.290,-37.488)
C4: (28.360,-31.650,-36.999)
N3: (28.536,-30.805,-35.929)
OP1: (26.353,-27.036,-42.888)
OP2: (26.113,-29.415,-42.012)
C2: (28.514,-29.449,-35.957)
C1': (28.251,-27.432,-37.265)
C3': (29.971,-26.731,-38.687)
O5': (27.821,-27.860,-40.998)
O4': (27.673,-27.083,-38.504)
C5': (28.420,-26.591,-40.759)
P: (26.419,-27.990,-41.755)
C4': (28.627,-26.329,-39.285)
C2': (29.633,-26.803,-37.215)
O2': (29.502,-25.486,-36.676)
N1: (28.308,-28.893,-37.175)
O4: (28.400,-32.866,-36.862)
O2: (28.676,-28.780,-34.977)
C6: (28.126,-29.675,-38.274)
C5: (28.143,-31.003,-38.234)
O3': (30.987,-25.789,-38.961)
Image (generated by PyMOL):
PyMOL image
show in jmol