Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:026:025
Extra
PDB:
ATOM 1 O3' U A 25 46.260 119.573 43.595 1.00 33.57 O
ATOM 2 P C A 26 47.003 119.444 42.180 1.00 35.01 P
ATOM 3 OP1 C A 26 47.922 118.285 42.277 1.00 37.24 O
ATOM 4 OP2 C A 26 47.541 120.765 41.777 1.00 39.56 O
ATOM 5 O5' C A 26 45.837 119.067 41.170 1.00 36.08 O
ATOM 6 C5' C A 26 45.086 117.856 41.351 1.00 38.51 C
ATOM 7 C4' C A 26 43.947 117.787 40.366 1.00 37.36 C
ATOM 8 O4' C A 26 43.037 118.890 40.607 1.00 37.90 O
ATOM 9 C3' C A 26 44.315 117.961 38.903 1.00 37.99 C
ATOM 10 O3' C A 26 44.846 116.797 38.304 1.00 39.61 O
ATOM 11 C2' C A 26 42.984 118.359 38.300 1.00 38.53 C
ATOM 12 O2' C A 26 42.107 117.252 38.183 1.00 38.31 O
ATOM 13 C1' C A 26 42.465 119.309 39.375 1.00 38.63 C
ATOM 14 N1 C A 26 42.851 120.714 39.126 1.00 39.46 N
ATOM 15 C2 C A 26 42.031 121.500 38.308 1.00 39.30 C
ATOM 16 O2 C A 26 41.048 120.979 37.761 1.00 38.62 O
ATOM 17 N3 C A 26 42.335 122.805 38.126 1.00 39.81 N
ATOM 18 C4 C A 26 43.421 123.326 38.703 1.00 41.09 C
ATOM 19 N4 C A 26 43.668 124.629 38.509 1.00 38.92 N
ATOM 20 C5 C A 26 44.300 122.538 39.508 1.00 39.06 C
ATOM 21 C6 C A 26 43.979 121.251 39.692 1.00 39.36 C
ATOM 22 P A A 27 45.805 116.948 37.022 1.00 44.72 P
ATOM 23 OP1 A A 27 46.324 115.596 36.686 1.00 43.55 O
ATOM 24 OP2 A A 27 46.770 118.059 37.250 1.00 45.97 O
ATOM 25 O5' A A 27 44.808 117.446 35.884 1.00 44.72 O
TER
ATOM 1 O3' C B 24 46.674 124.294 47.570 1.00 34.62 O
ATOM 2 P U B 25 47.543 123.864 46.290 1.00 33.61 P
ATOM 3 OP1 U B 25 48.745 123.136 46.755 1.00 34.14 O
ATOM 4 OP2 U B 25 47.693 125.045 45.406 1.00 34.46 O
ATOM 5 O5' U B 25 46.618 122.822 45.523 1.00 35.52 O
ATOM 6 C5' U B 25 46.291 121.552 46.113 1.00 34.49 C
ATOM 7 C4' U B 25 45.182 120.884 45.341 1.00 33.18 C
ATOM 8 O4' U B 25 43.988 121.714 45.381 1.00 33.45 O
ATOM 9 C3' U B 25 45.420 120.686 43.852 1.00 33.68 C
ATOM 10 O3' U B 25 46.260 119.573 43.595 1.00 33.57 O
ATOM 11 C2' U B 25 43.999 120.495 43.345 1.00 34.74 C
ATOM 12 O2' U B 25 43.459 119.228 43.674 1.00 36.35 O
ATOM 13 C1' U B 25 43.259 121.543 44.173 1.00 36.12 C
ATOM 14 N1 U B 25 43.177 122.830 43.464 1.00 38.07 N
ATOM 15 C2 U B 25 42.143 122.983 42.560 1.00 40.06 C
ATOM 16 O2 U B 25 41.326 122.109 42.337 1.00 42.15 O
ATOM 17 N3 U B 25 42.099 124.197 41.924 1.00 41.10 N
ATOM 18 C4 U B 25 42.967 125.248 42.082 1.00 41.75 C
ATOM 19 O4 U B 25 42.786 126.276 41.428 1.00 43.00 O
ATOM 20 C5 U B 25 44.024 125.018 43.029 1.00 41.96 C
ATOM 21 C6 U B 25 44.089 123.848 43.675 1.00 39.98 C
ATOM 22 P C B 26 47.003 119.444 42.180 1.00 35.01 P
ATOM 23 OP1 C B 26 47.922 118.285 42.277 1.00 37.24 O
ATOM 24 OP2 C B 26 47.541 120.765 41.777 1.00 39.56 O
ATOM 25 O5' C B 26 45.837 119.067 41.170 1.00 36.08 O
TER
ATOM 2 P C A 26 47.003 119.444 42.180 1.00 35.01 P
ATOM 3 OP1 C A 26 47.922 118.285 42.277 1.00 37.24 O
ATOM 4 OP2 C A 26 47.541 120.765 41.777 1.00 39.56 O
ATOM 5 O5' C A 26 45.837 119.067 41.170 1.00 36.08 O
ATOM 6 C5' C A 26 45.086 117.856 41.351 1.00 38.51 C
ATOM 7 C4' C A 26 43.947 117.787 40.366 1.00 37.36 C
ATOM 8 O4' C A 26 43.037 118.890 40.607 1.00 37.90 O
ATOM 9 C3' C A 26 44.315 117.961 38.903 1.00 37.99 C
ATOM 10 O3' C A 26 44.846 116.797 38.304 1.00 39.61 O
ATOM 11 C2' C A 26 42.984 118.359 38.300 1.00 38.53 C
ATOM 12 O2' C A 26 42.107 117.252 38.183 1.00 38.31 O
ATOM 13 C1' C A 26 42.465 119.309 39.375 1.00 38.63 C
ATOM 14 N1 C A 26 42.851 120.714 39.126 1.00 39.46 N
ATOM 15 C2 C A 26 42.031 121.500 38.308 1.00 39.30 C
ATOM 16 O2 C A 26 41.048 120.979 37.761 1.00 38.62 O
ATOM 17 N3 C A 26 42.335 122.805 38.126 1.00 39.81 N
ATOM 18 C4 C A 26 43.421 123.326 38.703 1.00 41.09 C
ATOM 19 N4 C A 26 43.668 124.629 38.509 1.00 38.92 N
ATOM 20 C5 C A 26 44.300 122.538 39.508 1.00 39.06 C
ATOM 21 C6 C A 26 43.979 121.251 39.692 1.00 39.36 C
ATOM 22 P A A 27 45.805 116.948 37.022 1.00 44.72 P
ATOM 23 OP1 A A 27 46.324 115.596 36.686 1.00 43.55 O
ATOM 24 OP2 A A 27 46.770 118.059 37.250 1.00 45.97 O
ATOM 25 O5' A A 27 44.808 117.446 35.884 1.00 44.72 O
TER
ATOM 1 O3' C B 24 46.674 124.294 47.570 1.00 34.62 O
ATOM 2 P U B 25 47.543 123.864 46.290 1.00 33.61 P
ATOM 3 OP1 U B 25 48.745 123.136 46.755 1.00 34.14 O
ATOM 4 OP2 U B 25 47.693 125.045 45.406 1.00 34.46 O
ATOM 5 O5' U B 25 46.618 122.822 45.523 1.00 35.52 O
ATOM 6 C5' U B 25 46.291 121.552 46.113 1.00 34.49 C
ATOM 7 C4' U B 25 45.182 120.884 45.341 1.00 33.18 C
ATOM 8 O4' U B 25 43.988 121.714 45.381 1.00 33.45 O
ATOM 9 C3' U B 25 45.420 120.686 43.852 1.00 33.68 C
ATOM 10 O3' U B 25 46.260 119.573 43.595 1.00 33.57 O
ATOM 11 C2' U B 25 43.999 120.495 43.345 1.00 34.74 C
ATOM 12 O2' U B 25 43.459 119.228 43.674 1.00 36.35 O
ATOM 13 C1' U B 25 43.259 121.543 44.173 1.00 36.12 C
ATOM 14 N1 U B 25 43.177 122.830 43.464 1.00 38.07 N
ATOM 15 C2 U B 25 42.143 122.983 42.560 1.00 40.06 C
ATOM 16 O2 U B 25 41.326 122.109 42.337 1.00 42.15 O
ATOM 17 N3 U B 25 42.099 124.197 41.924 1.00 41.10 N
ATOM 18 C4 U B 25 42.967 125.248 42.082 1.00 41.75 C
ATOM 19 O4 U B 25 42.786 126.276 41.428 1.00 43.00 O
ATOM 20 C5 U B 25 44.024 125.018 43.029 1.00 41.96 C
ATOM 21 C6 U B 25 44.089 123.848 43.675 1.00 39.98 C
ATOM 22 P C B 26 47.003 119.444 42.180 1.00 35.01 P
ATOM 23 OP1 C B 26 47.922 118.285 42.277 1.00 37.24 O
ATOM 24 OP2 C B 26 47.541 120.765 41.777 1.00 39.56 O
ATOM 25 O5' C B 26 45.837 119.067 41.170 1.00 36.08 O
TER
Atoms:
C2: (42.031,121.500,38.308)
OP1: (47.922,118.285,42.277)
OP2: (47.541,120.765,41.777)
C4: (43.421,123.326,38.703)
O5': (45.837,119.067,41.170)
C3': (44.315,117.961,38.903)
C1': (42.465,119.309,39.375)
O4': (43.037,118.890,40.607)
C5': (45.086,117.856,41.351)
P: (47.003,119.444,42.180)
O2: (41.048,120.979,37.761)
C4': (43.947,117.787,40.366)
C2': (42.984,118.359,38.300)
O2': (42.107,117.252,38.183)
N1: (42.851,120.714,39.126)
N3: (42.335,122.805,38.126)
N4: (43.668,124.629,38.509)
C6: (43.979,121.251,39.692)
C5: (44.300,122.538,39.508)
O3': (44.846,116.797,38.304)
OP1: (47.922,118.285,42.277)
OP2: (47.541,120.765,41.777)
C4: (43.421,123.326,38.703)
O5': (45.837,119.067,41.170)
C3': (44.315,117.961,38.903)
C1': (42.465,119.309,39.375)
O4': (43.037,118.890,40.607)
C5': (45.086,117.856,41.351)
P: (47.003,119.444,42.180)
O2: (41.048,120.979,37.761)
C4': (43.947,117.787,40.366)
C2': (42.984,118.359,38.300)
O2': (42.107,117.252,38.183)
N1: (42.851,120.714,39.126)
N3: (42.335,122.805,38.126)
N4: (43.668,124.629,38.509)
C6: (43.979,121.251,39.692)
C5: (44.300,122.538,39.508)
O3': (44.846,116.797,38.304)
C4: (42.967,125.248,42.082)
N3: (42.099,124.197,41.924)
OP1: (48.745,123.136,46.755)
OP2: (47.693,125.045,45.406)
C2: (42.143,122.983,42.560)
C1': (43.259,121.543,44.173)
C3': (45.420,120.686,43.852)
O5': (46.618,122.822,45.523)
O4': (43.988,121.714,45.381)
C5': (46.291,121.552,46.113)
P: (47.543,123.864,46.290)
C4': (45.182,120.884,45.341)
C2': (43.999,120.495,43.345)
O2': (43.459,119.228,43.674)
N1: (43.177,122.830,43.464)
O4: (42.786,126.276,41.428)
O2: (41.326,122.109,42.337)
C6: (44.089,123.848,43.675)
C5: (44.024,125.018,43.029)
O3': (46.260,119.573,43.595)
N3: (42.099,124.197,41.924)
OP1: (48.745,123.136,46.755)
OP2: (47.693,125.045,45.406)
C2: (42.143,122.983,42.560)
C1': (43.259,121.543,44.173)
C3': (45.420,120.686,43.852)
O5': (46.618,122.822,45.523)
O4': (43.988,121.714,45.381)
C5': (46.291,121.552,46.113)
P: (47.543,123.864,46.290)
C4': (45.182,120.884,45.341)
C2': (43.999,120.495,43.345)
O2': (43.459,119.228,43.674)
N1: (43.177,122.830,43.464)
O4: (42.786,126.276,41.428)
O2: (41.326,122.109,42.337)
C6: (44.089,123.848,43.675)
C5: (44.024,125.018,43.029)
O3': (46.260,119.573,43.595)
Image (generated by PyMOL):