Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXB:B38:A5
Extra
PDB:
ATOM 1 O3' C A 37 6.200 -18.142 13.961 1.00102.77 O
ATOM 2 P A A 38 6.839 -17.448 12.671 1.00103.12 P
ATOM 3 OP1 A A 38 8.175 -16.959 13.075 1.00103.87 O
ATOM 4 OP2 A A 38 5.867 -16.497 12.080 1.00104.00 O
ATOM 5 O5' A A 38 6.991 -18.686 11.666 1.00101.27 O
ATOM 6 C5' A A 38 7.918 -19.742 11.934 1.00 99.05 C
ATOM 7 C4' A A 38 7.955 -20.757 10.802 1.00 97.67 C
ATOM 8 O4' A A 38 6.826 -21.664 10.923 1.00 96.23 O
ATOM 9 C3' A A 38 7.841 -20.195 9.388 1.00 98.47 C
ATOM 10 O3' A A 38 9.106 -19.773 8.889 1.00 99.73 O
ATOM 11 C2' A A 38 7.305 -21.401 8.628 1.00 96.82 C
ATOM 12 O2' A A 38 8.309 -22.353 8.320 1.00 95.48 O
ATOM 13 C1' A A 38 6.315 -21.977 9.637 1.00 95.46 C
ATOM 14 N9 A A 38 4.952 -21.453 9.496 1.00 95.17 N
ATOM 15 C8 A A 38 4.383 -20.419 10.189 1.00 95.95 C
ATOM 16 N7 A A 38 3.139 -20.161 9.859 1.00 96.02 N
ATOM 17 C5 A A 38 2.865 -21.093 8.873 1.00 95.19 C
ATOM 18 C6 A A 38 1.710 -21.354 8.101 1.00 94.83 C
ATOM 19 N6 A A 38 0.573 -20.662 8.217 1.00 95.57 N
ATOM 20 N1 A A 38 1.762 -22.356 7.199 1.00 93.89 N
ATOM 21 C2 A A 38 2.902 -23.051 7.079 1.00 93.44 C
ATOM 22 N3 A A 38 4.051 -22.899 7.743 1.00 93.62 N
ATOM 23 C4 A A 38 3.971 -21.896 8.636 1.00 94.58 C
ATOM 24 P A A 39 9.243 -18.474 7.953 1.00102.15 P
ATOM 25 OP1 A A 39 10.686 -18.152 7.899 1.00102.92 O
ATOM 26 OP2 A A 39 8.296 -17.425 8.399 1.00103.09 O
ATOM 27 O5' A A 39 8.748 -18.982 6.519 1.00102.28 O
TER
ATOM 1 O3' C B 4 10.882 -25.321 1.336 1.00104.64 O
ATOM 2 P U B 5 11.173 -26.293 2.571 1.00101.79 P
ATOM 3 OP1 U B 5 12.496 -25.941 3.135 1.00101.19 O
ATOM 4 OP2 U B 5 10.914 -27.683 2.135 1.00101.33 O
ATOM 5 O5' U B 5 10.038 -25.882 3.614 1.00100.64 O
ATOM 6 C5' U B 5 10.073 -24.595 4.214 1.00100.96 C
ATOM 7 C4' U B 5 8.792 -24.325 4.971 1.00100.31 C
ATOM 8 O4' U B 5 7.666 -24.417 4.066 1.00101.47 O
ATOM 9 C3' U B 5 8.459 -25.342 6.047 1.00 98.22 C
ATOM 10 O3' U B 5 9.190 -25.093 7.231 1.00 97.12 O
ATOM 11 C2' U B 5 6.965 -25.105 6.212 1.00 98.66 C
ATOM 12 O2' U B 5 6.652 -23.935 6.937 1.00 99.54 O
ATOM 13 C1' U B 5 6.545 -24.948 4.753 1.00100.41 C
ATOM 14 N1 U B 5 6.085 -26.252 4.155 1.00100.14 N
ATOM 15 C2 U B 5 4.800 -26.676 4.428 1.00 99.95 C
ATOM 16 O2 U B 5 4.022 -26.041 5.116 1.00 99.94 O
ATOM 17 N3 U B 5 4.450 -27.879 3.861 1.00100.18 N
ATOM 18 C4 U B 5 5.241 -28.692 3.066 1.00100.63 C
ATOM 19 O4 U B 5 4.784 -29.745 2.627 1.00101.04 O
ATOM 20 C5 U B 5 6.570 -28.189 2.824 1.00100.84 C
ATOM 21 C6 U B 5 6.931 -27.018 3.368 1.00100.78 C
ATOM 22 P G B 6 9.693 -26.326 8.119 1.00 94.97 P
ATOM 23 OP1 G B 6 10.853 -25.861 8.915 1.00 94.83 O
ATOM 24 OP2 G B 6 9.821 -27.532 7.267 1.00 94.19 O
ATOM 25 O5' G B 6 8.447 -26.540 9.093 1.00 94.23 O
TER
ATOM 2 P A A 38 6.839 -17.448 12.671 1.00103.12 P
ATOM 3 OP1 A A 38 8.175 -16.959 13.075 1.00103.87 O
ATOM 4 OP2 A A 38 5.867 -16.497 12.080 1.00104.00 O
ATOM 5 O5' A A 38 6.991 -18.686 11.666 1.00101.27 O
ATOM 6 C5' A A 38 7.918 -19.742 11.934 1.00 99.05 C
ATOM 7 C4' A A 38 7.955 -20.757 10.802 1.00 97.67 C
ATOM 8 O4' A A 38 6.826 -21.664 10.923 1.00 96.23 O
ATOM 9 C3' A A 38 7.841 -20.195 9.388 1.00 98.47 C
ATOM 10 O3' A A 38 9.106 -19.773 8.889 1.00 99.73 O
ATOM 11 C2' A A 38 7.305 -21.401 8.628 1.00 96.82 C
ATOM 12 O2' A A 38 8.309 -22.353 8.320 1.00 95.48 O
ATOM 13 C1' A A 38 6.315 -21.977 9.637 1.00 95.46 C
ATOM 14 N9 A A 38 4.952 -21.453 9.496 1.00 95.17 N
ATOM 15 C8 A A 38 4.383 -20.419 10.189 1.00 95.95 C
ATOM 16 N7 A A 38 3.139 -20.161 9.859 1.00 96.02 N
ATOM 17 C5 A A 38 2.865 -21.093 8.873 1.00 95.19 C
ATOM 18 C6 A A 38 1.710 -21.354 8.101 1.00 94.83 C
ATOM 19 N6 A A 38 0.573 -20.662 8.217 1.00 95.57 N
ATOM 20 N1 A A 38 1.762 -22.356 7.199 1.00 93.89 N
ATOM 21 C2 A A 38 2.902 -23.051 7.079 1.00 93.44 C
ATOM 22 N3 A A 38 4.051 -22.899 7.743 1.00 93.62 N
ATOM 23 C4 A A 38 3.971 -21.896 8.636 1.00 94.58 C
ATOM 24 P A A 39 9.243 -18.474 7.953 1.00102.15 P
ATOM 25 OP1 A A 39 10.686 -18.152 7.899 1.00102.92 O
ATOM 26 OP2 A A 39 8.296 -17.425 8.399 1.00103.09 O
ATOM 27 O5' A A 39 8.748 -18.982 6.519 1.00102.28 O
TER
ATOM 1 O3' C B 4 10.882 -25.321 1.336 1.00104.64 O
ATOM 2 P U B 5 11.173 -26.293 2.571 1.00101.79 P
ATOM 3 OP1 U B 5 12.496 -25.941 3.135 1.00101.19 O
ATOM 4 OP2 U B 5 10.914 -27.683 2.135 1.00101.33 O
ATOM 5 O5' U B 5 10.038 -25.882 3.614 1.00100.64 O
ATOM 6 C5' U B 5 10.073 -24.595 4.214 1.00100.96 C
ATOM 7 C4' U B 5 8.792 -24.325 4.971 1.00100.31 C
ATOM 8 O4' U B 5 7.666 -24.417 4.066 1.00101.47 O
ATOM 9 C3' U B 5 8.459 -25.342 6.047 1.00 98.22 C
ATOM 10 O3' U B 5 9.190 -25.093 7.231 1.00 97.12 O
ATOM 11 C2' U B 5 6.965 -25.105 6.212 1.00 98.66 C
ATOM 12 O2' U B 5 6.652 -23.935 6.937 1.00 99.54 O
ATOM 13 C1' U B 5 6.545 -24.948 4.753 1.00100.41 C
ATOM 14 N1 U B 5 6.085 -26.252 4.155 1.00100.14 N
ATOM 15 C2 U B 5 4.800 -26.676 4.428 1.00 99.95 C
ATOM 16 O2 U B 5 4.022 -26.041 5.116 1.00 99.94 O
ATOM 17 N3 U B 5 4.450 -27.879 3.861 1.00100.18 N
ATOM 18 C4 U B 5 5.241 -28.692 3.066 1.00100.63 C
ATOM 19 O4 U B 5 4.784 -29.745 2.627 1.00101.04 O
ATOM 20 C5 U B 5 6.570 -28.189 2.824 1.00100.84 C
ATOM 21 C6 U B 5 6.931 -27.018 3.368 1.00100.78 C
ATOM 22 P G B 6 9.693 -26.326 8.119 1.00 94.97 P
ATOM 23 OP1 G B 6 10.853 -25.861 8.915 1.00 94.83 O
ATOM 24 OP2 G B 6 9.821 -27.532 7.267 1.00 94.19 O
ATOM 25 O5' G B 6 8.447 -26.540 9.093 1.00 94.23 O
TER
Atoms:
OP1: (8.175,-16.959,13.075)
OP2: (5.867,-16.497,12.080)
C3': (7.841,-20.195,9.388)
C1': (6.315,-21.977,9.637)
C5': (7.918,-19.742,11.934)
O4': (6.826,-21.664,10.923)
C8: (4.383,-20.419,10.189)
O2': (8.309,-22.353,8.320)
C6: (1.710,-21.354,8.101)
C5: (2.865,-21.093,8.873)
C4: (3.971,-21.896,8.636)
P: (6.839,-17.448,12.671)
C4': (7.955,-20.757,10.802)
C2': (7.305,-21.401,8.628)
C2: (2.902,-23.051,7.079)
N1: (1.762,-22.356,7.199)
N3: (4.051,-22.899,7.743)
N6: (0.573,-20.662,8.217)
N7: (3.139,-20.161,9.859)
N9: (4.952,-21.453,9.496)
O5': (6.991,-18.686,11.666)
O3': (9.106,-19.773,8.889)
OP2: (5.867,-16.497,12.080)
C3': (7.841,-20.195,9.388)
C1': (6.315,-21.977,9.637)
C5': (7.918,-19.742,11.934)
O4': (6.826,-21.664,10.923)
C8: (4.383,-20.419,10.189)
O2': (8.309,-22.353,8.320)
C6: (1.710,-21.354,8.101)
C5: (2.865,-21.093,8.873)
C4: (3.971,-21.896,8.636)
P: (6.839,-17.448,12.671)
C4': (7.955,-20.757,10.802)
C2': (7.305,-21.401,8.628)
C2: (2.902,-23.051,7.079)
N1: (1.762,-22.356,7.199)
N3: (4.051,-22.899,7.743)
N6: (0.573,-20.662,8.217)
N7: (3.139,-20.161,9.859)
N9: (4.952,-21.453,9.496)
O5': (6.991,-18.686,11.666)
O3': (9.106,-19.773,8.889)
C4: (5.241,-28.692,3.066)
N3: (4.450,-27.879,3.861)
OP1: (12.496,-25.941,3.135)
OP2: (10.914,-27.683,2.135)
C2: (4.800,-26.676,4.428)
C1': (6.545,-24.948,4.753)
C3': (8.459,-25.342,6.047)
O5': (10.038,-25.882,3.614)
O4': (7.666,-24.417,4.066)
C5': (10.073,-24.595,4.214)
P: (11.173,-26.293,2.571)
C4': (8.792,-24.325,4.971)
C2': (6.965,-25.105,6.212)
O2': (6.652,-23.935,6.937)
N1: (6.085,-26.252,4.155)
O4: (4.784,-29.745,2.627)
O2: (4.022,-26.041,5.116)
C6: (6.931,-27.018,3.368)
C5: (6.570,-28.189,2.824)
O3': (9.190,-25.093,7.231)
N3: (4.450,-27.879,3.861)
OP1: (12.496,-25.941,3.135)
OP2: (10.914,-27.683,2.135)
C2: (4.800,-26.676,4.428)
C1': (6.545,-24.948,4.753)
C3': (8.459,-25.342,6.047)
O5': (10.038,-25.882,3.614)
O4': (7.666,-24.417,4.066)
C5': (10.073,-24.595,4.214)
P: (11.173,-26.293,2.571)
C4': (8.792,-24.325,4.971)
C2': (6.965,-25.105,6.212)
O2': (6.652,-23.935,6.937)
N1: (6.085,-26.252,4.155)
O4: (4.784,-29.745,2.627)
O2: (4.022,-26.041,5.116)
C6: (6.931,-27.018,3.368)
C5: (6.570,-28.189,2.824)
O3': (9.190,-25.093,7.231)
Image (generated by PyMOL):