Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ6:0548:0547
Extra
PDB:
ATOM 1 O3' U A 547 -13.986 113.819 104.093 1.00 96.70 O
ATOM 2 P C A 548 -13.798 112.222 104.020 1.00 96.55 P
ATOM 3 OP1 C A 548 -13.970 111.694 105.398 1.00 96.26 O
ATOM 4 OP2 C A 548 -12.540 111.940 103.281 1.00 97.40 O
ATOM 5 O5' C A 548 -15.026 111.722 103.133 1.00 94.53 O
ATOM 6 C5' C A 548 -16.374 111.753 103.644 1.00 93.11 C
ATOM 7 C4' C A 548 -17.350 111.308 102.579 1.00 91.66 C
ATOM 8 O4' C A 548 -17.285 112.229 101.459 1.00 92.61 O
ATOM 9 C3' C A 548 -17.062 109.956 101.949 1.00 90.50 C
ATOM 10 O3' C A 548 -17.504 108.862 102.731 1.00 87.89 O
ATOM 11 C2' C A 548 -17.770 110.067 100.609 1.00 91.62 C
ATOM 12 O2' C A 548 -19.170 109.879 100.680 1.00 90.87 O
ATOM 13 C1' C A 548 -17.453 111.517 100.240 1.00 93.24 C
ATOM 14 N1 C A 548 -16.202 111.615 99.460 1.00 94.85 N
ATOM 15 C2 C A 548 -16.271 111.581 98.058 1.00 95.96 C
ATOM 16 O2 C A 548 -17.384 111.515 97.507 1.00 96.40 O
ATOM 17 N3 C A 548 -15.123 111.624 97.340 1.00 96.82 N
ATOM 18 C4 C A 548 -13.946 111.706 97.965 1.00 96.51 C
ATOM 19 N4 C A 548 -12.841 111.730 97.216 1.00 96.27 N
ATOM 20 C5 C A 548 -13.848 111.764 99.385 1.00 96.84 C
ATOM 21 C6 C A 548 -14.988 111.718 100.086 1.00 95.78 C
ATOM 22 P G A 549 -16.678 107.487 102.694 1.00 87.60 P
ATOM 23 OP1 G A 549 -17.251 106.590 103.727 1.00 89.26 O
ATOM 24 OP2 G A 549 -15.227 107.810 102.730 1.00 88.28 O
ATOM 25 O5' G A 549 -17.009 106.878 101.260 1.00 85.02 O
TER
ATOM 1 O3' C B 546 -9.535 117.063 102.425 1.00 91.71 O
ATOM 2 P U B 547 -9.915 115.518 102.671 1.00 92.91 P
ATOM 3 OP1 U B 547 -9.008 115.005 103.726 1.00 93.27 O
ATOM 4 OP2 U B 547 -9.974 114.821 101.361 1.00 92.11 O
ATOM 5 O5' U B 547 -11.399 115.578 103.255 1.00 94.11 O
ATOM 6 C5' U B 547 -12.393 116.394 102.615 1.00 94.89 C
ATOM 7 C4' U B 547 -13.789 116.029 103.061 1.00 96.09 C
ATOM 8 O4' U B 547 -14.712 116.776 102.219 1.00 96.91 O
ATOM 9 C3' U B 547 -14.181 114.565 102.893 1.00 97.09 C
ATOM 10 O3' U B 547 -13.986 113.819 104.093 1.00 96.70 O
ATOM 11 C2' U B 547 -15.642 114.641 102.472 1.00 97.47 C
ATOM 12 O2' U B 547 -16.518 114.842 103.563 1.00 98.04 O
ATOM 13 C1' U B 547 -15.622 115.891 101.592 1.00 98.06 C
ATOM 14 N1 U B 547 -15.157 115.634 100.216 1.00 99.32 N
ATOM 15 C2 U B 547 -16.113 115.478 99.222 1.00100.66 C
ATOM 16 O2 U B 547 -17.313 115.578 99.424 1.00102.08 O
ATOM 17 N3 U B 547 -15.608 115.195 97.976 1.00101.47 N
ATOM 18 C4 U B 547 -14.279 115.063 97.626 1.00101.48 C
ATOM 19 O4 U B 547 -13.982 114.787 96.462 1.00101.81 O
ATOM 20 C5 U B 547 -13.358 115.268 98.695 1.00100.95 C
ATOM 21 C6 U B 547 -13.813 115.539 99.919 1.00 99.91 C
ATOM 22 P C B 548 -13.798 112.222 104.020 1.00 96.55 P
ATOM 23 OP1 C B 548 -13.970 111.694 105.398 1.00 96.26 O
ATOM 24 OP2 C B 548 -12.540 111.940 103.281 1.00 97.40 O
ATOM 25 O5' C B 548 -15.026 111.722 103.133 1.00 94.53 O
TER
ATOM 2 P C A 548 -13.798 112.222 104.020 1.00 96.55 P
ATOM 3 OP1 C A 548 -13.970 111.694 105.398 1.00 96.26 O
ATOM 4 OP2 C A 548 -12.540 111.940 103.281 1.00 97.40 O
ATOM 5 O5' C A 548 -15.026 111.722 103.133 1.00 94.53 O
ATOM 6 C5' C A 548 -16.374 111.753 103.644 1.00 93.11 C
ATOM 7 C4' C A 548 -17.350 111.308 102.579 1.00 91.66 C
ATOM 8 O4' C A 548 -17.285 112.229 101.459 1.00 92.61 O
ATOM 9 C3' C A 548 -17.062 109.956 101.949 1.00 90.50 C
ATOM 10 O3' C A 548 -17.504 108.862 102.731 1.00 87.89 O
ATOM 11 C2' C A 548 -17.770 110.067 100.609 1.00 91.62 C
ATOM 12 O2' C A 548 -19.170 109.879 100.680 1.00 90.87 O
ATOM 13 C1' C A 548 -17.453 111.517 100.240 1.00 93.24 C
ATOM 14 N1 C A 548 -16.202 111.615 99.460 1.00 94.85 N
ATOM 15 C2 C A 548 -16.271 111.581 98.058 1.00 95.96 C
ATOM 16 O2 C A 548 -17.384 111.515 97.507 1.00 96.40 O
ATOM 17 N3 C A 548 -15.123 111.624 97.340 1.00 96.82 N
ATOM 18 C4 C A 548 -13.946 111.706 97.965 1.00 96.51 C
ATOM 19 N4 C A 548 -12.841 111.730 97.216 1.00 96.27 N
ATOM 20 C5 C A 548 -13.848 111.764 99.385 1.00 96.84 C
ATOM 21 C6 C A 548 -14.988 111.718 100.086 1.00 95.78 C
ATOM 22 P G A 549 -16.678 107.487 102.694 1.00 87.60 P
ATOM 23 OP1 G A 549 -17.251 106.590 103.727 1.00 89.26 O
ATOM 24 OP2 G A 549 -15.227 107.810 102.730 1.00 88.28 O
ATOM 25 O5' G A 549 -17.009 106.878 101.260 1.00 85.02 O
TER
ATOM 1 O3' C B 546 -9.535 117.063 102.425 1.00 91.71 O
ATOM 2 P U B 547 -9.915 115.518 102.671 1.00 92.91 P
ATOM 3 OP1 U B 547 -9.008 115.005 103.726 1.00 93.27 O
ATOM 4 OP2 U B 547 -9.974 114.821 101.361 1.00 92.11 O
ATOM 5 O5' U B 547 -11.399 115.578 103.255 1.00 94.11 O
ATOM 6 C5' U B 547 -12.393 116.394 102.615 1.00 94.89 C
ATOM 7 C4' U B 547 -13.789 116.029 103.061 1.00 96.09 C
ATOM 8 O4' U B 547 -14.712 116.776 102.219 1.00 96.91 O
ATOM 9 C3' U B 547 -14.181 114.565 102.893 1.00 97.09 C
ATOM 10 O3' U B 547 -13.986 113.819 104.093 1.00 96.70 O
ATOM 11 C2' U B 547 -15.642 114.641 102.472 1.00 97.47 C
ATOM 12 O2' U B 547 -16.518 114.842 103.563 1.00 98.04 O
ATOM 13 C1' U B 547 -15.622 115.891 101.592 1.00 98.06 C
ATOM 14 N1 U B 547 -15.157 115.634 100.216 1.00 99.32 N
ATOM 15 C2 U B 547 -16.113 115.478 99.222 1.00100.66 C
ATOM 16 O2 U B 547 -17.313 115.578 99.424 1.00102.08 O
ATOM 17 N3 U B 547 -15.608 115.195 97.976 1.00101.47 N
ATOM 18 C4 U B 547 -14.279 115.063 97.626 1.00101.48 C
ATOM 19 O4 U B 547 -13.982 114.787 96.462 1.00101.81 O
ATOM 20 C5 U B 547 -13.358 115.268 98.695 1.00100.95 C
ATOM 21 C6 U B 547 -13.813 115.539 99.919 1.00 99.91 C
ATOM 22 P C B 548 -13.798 112.222 104.020 1.00 96.55 P
ATOM 23 OP1 C B 548 -13.970 111.694 105.398 1.00 96.26 O
ATOM 24 OP2 C B 548 -12.540 111.940 103.281 1.00 97.40 O
ATOM 25 O5' C B 548 -15.026 111.722 103.133 1.00 94.53 O
TER
Atoms:
C2: (-16.271,111.581,98.058)
OP1: (-13.970,111.694,105.398)
OP2: (-12.540,111.940,103.281)
C4: (-13.946,111.706,97.965)
O5': (-15.026,111.722,103.133)
C3': (-17.062,109.956,101.949)
C1': (-17.453,111.517,100.240)
O4': (-17.285,112.229,101.459)
C5': (-16.374,111.753,103.644)
P: (-13.798,112.222,104.020)
O2: (-17.384,111.515,97.507)
C4': (-17.350,111.308,102.579)
C2': (-17.770,110.067,100.609)
O2': (-19.170,109.879,100.680)
N1: (-16.202,111.615,99.460)
N3: (-15.123,111.624,97.340)
N4: (-12.841,111.730,97.216)
C6: (-14.988,111.718,100.086)
C5: (-13.848,111.764,99.385)
O3': (-17.504,108.862,102.731)
OP1: (-13.970,111.694,105.398)
OP2: (-12.540,111.940,103.281)
C4: (-13.946,111.706,97.965)
O5': (-15.026,111.722,103.133)
C3': (-17.062,109.956,101.949)
C1': (-17.453,111.517,100.240)
O4': (-17.285,112.229,101.459)
C5': (-16.374,111.753,103.644)
P: (-13.798,112.222,104.020)
O2: (-17.384,111.515,97.507)
C4': (-17.350,111.308,102.579)
C2': (-17.770,110.067,100.609)
O2': (-19.170,109.879,100.680)
N1: (-16.202,111.615,99.460)
N3: (-15.123,111.624,97.340)
N4: (-12.841,111.730,97.216)
C6: (-14.988,111.718,100.086)
C5: (-13.848,111.764,99.385)
O3': (-17.504,108.862,102.731)
C4: (-14.279,115.063,97.626)
N3: (-15.608,115.195,97.976)
OP1: (-9.008,115.005,103.726)
OP2: (-9.974,114.821,101.361)
C2: (-16.113,115.478,99.222)
C1': (-15.622,115.891,101.592)
C3': (-14.181,114.565,102.893)
O5': (-11.399,115.578,103.255)
O4': (-14.712,116.776,102.219)
C5': (-12.393,116.394,102.615)
P: (-9.915,115.518,102.671)
C4': (-13.789,116.029,103.061)
C2': (-15.642,114.641,102.472)
O2': (-16.518,114.842,103.563)
N1: (-15.157,115.634,100.216)
O4: (-13.982,114.787,96.462)
O2: (-17.313,115.578,99.424)
C6: (-13.813,115.539,99.919)
C5: (-13.358,115.268,98.695)
O3': (-13.986,113.819,104.093)
N3: (-15.608,115.195,97.976)
OP1: (-9.008,115.005,103.726)
OP2: (-9.974,114.821,101.361)
C2: (-16.113,115.478,99.222)
C1': (-15.622,115.891,101.592)
C3': (-14.181,114.565,102.893)
O5': (-11.399,115.578,103.255)
O4': (-14.712,116.776,102.219)
C5': (-12.393,116.394,102.615)
P: (-9.915,115.518,102.671)
C4': (-13.789,116.029,103.061)
C2': (-15.642,114.641,102.472)
O2': (-16.518,114.842,103.563)
N1: (-15.157,115.634,100.216)
O4: (-13.982,114.787,96.462)
O2: (-17.313,115.578,99.424)
C6: (-13.813,115.539,99.919)
C5: (-13.358,115.268,98.695)
O3': (-13.986,113.819,104.093)
Image (generated by PyMOL):