Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:0605:0604
Extra
PDB:
ATOM 1 O3' U A 604 21.268 111.620 105.980 1.00 46.95 O
ATOM 2 P C A 605 22.852 111.787 106.204 1.00 48.08 P
ATOM 3 OP1 C A 605 23.332 110.580 106.928 1.00 49.78 O
ATOM 4 OP2 C A 605 23.117 113.135 106.764 1.00 48.48 O
ATOM 5 O5' C A 605 23.458 111.750 104.731 1.00 46.76 O
ATOM 6 C5' C A 605 23.410 110.550 103.950 1.00 43.75 C
ATOM 7 C4' C A 605 23.910 110.815 102.556 1.00 42.21 C
ATOM 8 O4' C A 605 23.009 111.734 101.886 1.00 41.68 O
ATOM 9 C3' C A 605 25.248 111.520 102.441 1.00 43.45 C
ATOM 10 O3' C A 605 26.356 110.661 102.675 1.00 43.24 O
ATOM 11 C2' C A 605 25.186 112.038 101.012 1.00 41.76 C
ATOM 12 O2' C A 605 25.387 111.030 100.043 1.00 42.16 O
ATOM 13 C1' C A 605 23.736 112.503 100.942 1.00 38.85 C
ATOM 14 N1 C A 605 23.625 113.928 101.292 1.00 38.55 N
ATOM 15 C2 C A 605 23.804 114.873 100.280 1.00 36.29 C
ATOM 16 O2 C A 605 24.028 114.479 99.123 1.00 36.64 O
ATOM 17 N3 C A 605 23.739 116.186 100.584 1.00 35.29 N
ATOM 18 C4 C A 605 23.528 116.571 101.844 1.00 35.51 C
ATOM 19 N4 C A 605 23.538 117.881 102.103 1.00 32.62 N
ATOM 20 C5 C A 605 23.319 115.631 102.896 1.00 35.05 C
ATOM 21 C6 C A 605 23.371 114.331 102.578 1.00 37.14 C
ATOM 22 P G A 606 27.730 111.281 103.232 1.00 43.72 P
ATOM 23 OP1 G A 606 28.719 110.168 103.264 1.00 44.04 O
ATOM 24 OP2 G A 606 27.462 112.056 104.471 1.00 43.68 O
ATOM 25 O5' G A 606 28.178 112.313 102.101 1.00 44.08 O
TER
ATOM 1 O3' G B 603 17.857 116.100 108.369 1.00 49.53 O
ATOM 2 P U B 604 19.403 115.682 108.397 1.00 50.84 P
ATOM 3 OP1 U B 604 19.629 114.878 109.627 1.00 52.13 O
ATOM 4 OP2 U B 604 20.230 116.892 108.148 1.00 50.29 O
ATOM 5 O5' U B 604 19.537 114.699 107.157 1.00 48.83 O
ATOM 6 C5' U B 604 18.894 113.431 107.169 1.00 45.78 C
ATOM 7 C4' U B 604 19.099 112.739 105.851 1.00 45.53 C
ATOM 8 O4' U B 604 18.421 113.482 104.807 1.00 45.79 O
ATOM 9 C3' U B 604 20.532 112.666 105.358 1.00 47.01 C
ATOM 10 O3' U B 604 21.268 111.620 105.980 1.00 46.95 O
ATOM 11 C2' U B 604 20.324 112.423 103.874 1.00 45.48 C
ATOM 12 O2' U B 604 19.913 111.093 103.636 1.00 45.42 O
ATOM 13 C1' U B 604 19.141 113.351 103.591 1.00 44.84 C
ATOM 14 N1 U B 604 19.537 114.694 103.129 1.00 44.38 N
ATOM 15 C2 U B 604 19.825 114.855 101.779 1.00 42.26 C
ATOM 16 O2 U B 604 19.780 113.940 100.975 1.00 41.85 O
ATOM 17 N3 U B 604 20.167 116.130 101.407 1.00 41.25 N
ATOM 18 C4 U B 604 20.251 117.240 102.222 1.00 41.62 C
ATOM 19 O4 U B 604 20.560 118.324 101.731 1.00 40.35 O
ATOM 20 C5 U B 604 19.957 116.995 103.602 1.00 42.05 C
ATOM 21 C6 U B 604 19.618 115.763 103.999 1.00 42.96 C
ATOM 22 P C B 605 22.852 111.787 106.204 1.00 48.08 P
ATOM 23 OP1 C B 605 23.332 110.580 106.928 1.00 49.78 O
ATOM 24 OP2 C B 605 23.117 113.135 106.764 1.00 48.48 O
ATOM 25 O5' C B 605 23.458 111.750 104.731 1.00 46.76 O
TER
ATOM 2 P C A 605 22.852 111.787 106.204 1.00 48.08 P
ATOM 3 OP1 C A 605 23.332 110.580 106.928 1.00 49.78 O
ATOM 4 OP2 C A 605 23.117 113.135 106.764 1.00 48.48 O
ATOM 5 O5' C A 605 23.458 111.750 104.731 1.00 46.76 O
ATOM 6 C5' C A 605 23.410 110.550 103.950 1.00 43.75 C
ATOM 7 C4' C A 605 23.910 110.815 102.556 1.00 42.21 C
ATOM 8 O4' C A 605 23.009 111.734 101.886 1.00 41.68 O
ATOM 9 C3' C A 605 25.248 111.520 102.441 1.00 43.45 C
ATOM 10 O3' C A 605 26.356 110.661 102.675 1.00 43.24 O
ATOM 11 C2' C A 605 25.186 112.038 101.012 1.00 41.76 C
ATOM 12 O2' C A 605 25.387 111.030 100.043 1.00 42.16 O
ATOM 13 C1' C A 605 23.736 112.503 100.942 1.00 38.85 C
ATOM 14 N1 C A 605 23.625 113.928 101.292 1.00 38.55 N
ATOM 15 C2 C A 605 23.804 114.873 100.280 1.00 36.29 C
ATOM 16 O2 C A 605 24.028 114.479 99.123 1.00 36.64 O
ATOM 17 N3 C A 605 23.739 116.186 100.584 1.00 35.29 N
ATOM 18 C4 C A 605 23.528 116.571 101.844 1.00 35.51 C
ATOM 19 N4 C A 605 23.538 117.881 102.103 1.00 32.62 N
ATOM 20 C5 C A 605 23.319 115.631 102.896 1.00 35.05 C
ATOM 21 C6 C A 605 23.371 114.331 102.578 1.00 37.14 C
ATOM 22 P G A 606 27.730 111.281 103.232 1.00 43.72 P
ATOM 23 OP1 G A 606 28.719 110.168 103.264 1.00 44.04 O
ATOM 24 OP2 G A 606 27.462 112.056 104.471 1.00 43.68 O
ATOM 25 O5' G A 606 28.178 112.313 102.101 1.00 44.08 O
TER
ATOM 1 O3' G B 603 17.857 116.100 108.369 1.00 49.53 O
ATOM 2 P U B 604 19.403 115.682 108.397 1.00 50.84 P
ATOM 3 OP1 U B 604 19.629 114.878 109.627 1.00 52.13 O
ATOM 4 OP2 U B 604 20.230 116.892 108.148 1.00 50.29 O
ATOM 5 O5' U B 604 19.537 114.699 107.157 1.00 48.83 O
ATOM 6 C5' U B 604 18.894 113.431 107.169 1.00 45.78 C
ATOM 7 C4' U B 604 19.099 112.739 105.851 1.00 45.53 C
ATOM 8 O4' U B 604 18.421 113.482 104.807 1.00 45.79 O
ATOM 9 C3' U B 604 20.532 112.666 105.358 1.00 47.01 C
ATOM 10 O3' U B 604 21.268 111.620 105.980 1.00 46.95 O
ATOM 11 C2' U B 604 20.324 112.423 103.874 1.00 45.48 C
ATOM 12 O2' U B 604 19.913 111.093 103.636 1.00 45.42 O
ATOM 13 C1' U B 604 19.141 113.351 103.591 1.00 44.84 C
ATOM 14 N1 U B 604 19.537 114.694 103.129 1.00 44.38 N
ATOM 15 C2 U B 604 19.825 114.855 101.779 1.00 42.26 C
ATOM 16 O2 U B 604 19.780 113.940 100.975 1.00 41.85 O
ATOM 17 N3 U B 604 20.167 116.130 101.407 1.00 41.25 N
ATOM 18 C4 U B 604 20.251 117.240 102.222 1.00 41.62 C
ATOM 19 O4 U B 604 20.560 118.324 101.731 1.00 40.35 O
ATOM 20 C5 U B 604 19.957 116.995 103.602 1.00 42.05 C
ATOM 21 C6 U B 604 19.618 115.763 103.999 1.00 42.96 C
ATOM 22 P C B 605 22.852 111.787 106.204 1.00 48.08 P
ATOM 23 OP1 C B 605 23.332 110.580 106.928 1.00 49.78 O
ATOM 24 OP2 C B 605 23.117 113.135 106.764 1.00 48.48 O
ATOM 25 O5' C B 605 23.458 111.750 104.731 1.00 46.76 O
TER
Atoms:
C2: (23.804,114.873,100.280)
OP1: (23.332,110.580,106.928)
OP2: (23.117,113.135,106.764)
C4: (23.528,116.571,101.844)
O5': (23.458,111.750,104.731)
C3': (25.248,111.520,102.441)
C1': (23.736,112.503,100.942)
O4': (23.009,111.734,101.886)
C5': (23.410,110.550,103.950)
P: (22.852,111.787,106.204)
O2: (24.028,114.479,99.123)
C4': (23.910,110.815,102.556)
C2': (25.186,112.038,101.012)
O2': (25.387,111.030,100.043)
N1: (23.625,113.928,101.292)
N3: (23.739,116.186,100.584)
N4: (23.538,117.881,102.103)
C6: (23.371,114.331,102.578)
C5: (23.319,115.631,102.896)
O3': (26.356,110.661,102.675)
OP1: (23.332,110.580,106.928)
OP2: (23.117,113.135,106.764)
C4: (23.528,116.571,101.844)
O5': (23.458,111.750,104.731)
C3': (25.248,111.520,102.441)
C1': (23.736,112.503,100.942)
O4': (23.009,111.734,101.886)
C5': (23.410,110.550,103.950)
P: (22.852,111.787,106.204)
O2: (24.028,114.479,99.123)
C4': (23.910,110.815,102.556)
C2': (25.186,112.038,101.012)
O2': (25.387,111.030,100.043)
N1: (23.625,113.928,101.292)
N3: (23.739,116.186,100.584)
N4: (23.538,117.881,102.103)
C6: (23.371,114.331,102.578)
C5: (23.319,115.631,102.896)
O3': (26.356,110.661,102.675)
C4: (20.251,117.240,102.222)
N3: (20.167,116.130,101.407)
OP1: (19.629,114.878,109.627)
OP2: (20.230,116.892,108.148)
C2: (19.825,114.855,101.779)
C1': (19.141,113.351,103.591)
C3': (20.532,112.666,105.358)
O5': (19.537,114.699,107.157)
O4': (18.421,113.482,104.807)
C5': (18.894,113.431,107.169)
P: (19.403,115.682,108.397)
C4': (19.099,112.739,105.851)
C2': (20.324,112.423,103.874)
O2': (19.913,111.093,103.636)
N1: (19.537,114.694,103.129)
O4: (20.560,118.324,101.731)
O2: (19.780,113.940,100.975)
C6: (19.618,115.763,103.999)
C5: (19.957,116.995,103.602)
O3': (21.268,111.620,105.980)
N3: (20.167,116.130,101.407)
OP1: (19.629,114.878,109.627)
OP2: (20.230,116.892,108.148)
C2: (19.825,114.855,101.779)
C1': (19.141,113.351,103.591)
C3': (20.532,112.666,105.358)
O5': (19.537,114.699,107.157)
O4': (18.421,113.482,104.807)
C5': (18.894,113.431,107.169)
P: (19.403,115.682,108.397)
C4': (19.099,112.739,105.851)
C2': (20.324,112.423,103.874)
O2': (19.913,111.093,103.636)
N1: (19.537,114.694,103.129)
O4: (20.560,118.324,101.731)
O2: (19.780,113.940,100.975)
C6: (19.618,115.763,103.999)
C5: (19.957,116.995,103.602)
O3': (21.268,111.620,105.980)
Image (generated by PyMOL):