Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXD:A23:A22
Extra
PDB:
ATOM 1 O3' U A 22 16.606 -57.322 6.239 1.00 78.37 O
ATOM 2 P C A 23 15.775 -58.283 7.220 1.00 80.23 P
ATOM 3 OP1 C A 23 14.657 -58.864 6.437 1.00 81.58 O
ATOM 4 OP2 C A 23 15.483 -57.556 8.478 1.00 78.44 O
ATOM 5 O5' C A 23 16.834 -59.435 7.543 1.00 81.76 O
ATOM 6 C5' C A 23 17.311 -60.266 6.494 1.00 84.14 C
ATOM 7 C4' C A 23 18.192 -61.357 7.057 1.00 86.10 C
ATOM 8 O4' C A 23 19.449 -60.794 7.512 1.00 84.84 O
ATOM 9 C3' C A 23 17.639 -62.027 8.304 1.00 87.16 C
ATOM 10 O3' C A 23 16.632 -62.966 7.970 1.00 90.10 O
ATOM 11 C2' C A 23 18.910 -62.663 8.849 1.00 87.78 C
ATOM 12 O2' C A 23 19.323 -63.797 8.104 1.00 90.32 O
ATOM 13 C1' C A 23 19.889 -61.503 8.660 1.00 85.17 C
ATOM 14 N1 C A 23 19.974 -60.578 9.848 1.00 82.37 N
ATOM 15 C2 C A 23 20.769 -60.932 10.954 1.00 82.13 C
ATOM 16 O2 C A 23 21.393 -62.000 10.943 1.00 83.24 O
ATOM 17 N3 C A 23 20.833 -60.086 12.020 1.00 80.50 N
ATOM 18 C4 C A 23 20.146 -58.936 12.007 1.00 79.07 C
ATOM 19 N4 C A 23 20.237 -58.134 13.073 1.00 77.96 N
ATOM 20 C5 C A 23 19.333 -58.554 10.895 1.00 78.74 C
ATOM 21 C6 C A 23 19.279 -59.395 9.853 1.00 80.35 C
ATOM 22 P G A 24 15.351 -63.128 8.916 1.00 91.13 P
ATOM 23 OP1 G A 24 14.300 -63.820 8.131 1.00 92.42 O
ATOM 24 OP2 G A 24 15.047 -61.834 9.572 1.00 88.44 O
ATOM 25 O5' G A 24 15.915 -64.115 10.038 1.00 93.35 O
TER
ATOM 1 O3' A B 21 16.812 -51.655 8.563 1.00 69.03 O
ATOM 2 P U B 22 16.236 -53.040 9.114 1.00 70.34 P
ATOM 3 OP1 U B 22 14.783 -53.073 8.814 1.00 70.98 O
ATOM 4 OP2 U B 22 16.677 -53.205 10.518 1.00 70.20 O
ATOM 5 O5' U B 22 17.014 -54.121 8.221 1.00 71.41 O
ATOM 6 C5' U B 22 16.785 -54.197 6.816 1.00 72.03 C
ATOM 7 C4' U B 22 17.741 -55.172 6.162 1.00 73.68 C
ATOM 8 O4' U B 22 19.111 -54.760 6.400 1.00 72.96 O
ATOM 9 C3' U B 22 17.711 -56.580 6.731 1.00 75.70 C
ATOM 10 O3' U B 22 16.606 -57.322 6.239 1.00 78.37 O
ATOM 11 C2' U B 22 19.044 -57.113 6.225 1.00 76.11 C
ATOM 12 O2' U B 22 19.009 -57.452 4.853 1.00 76.81 O
ATOM 13 C1' U B 22 19.946 -55.906 6.490 1.00 74.07 C
ATOM 14 N1 U B 22 20.616 -55.974 7.845 1.00 73.02 N
ATOM 15 C2 U B 22 21.697 -56.821 8.039 1.00 73.80 C
ATOM 16 O2 U B 22 22.170 -57.529 7.170 1.00 75.48 O
ATOM 17 N3 U B 22 22.225 -56.815 9.308 1.00 73.14 N
ATOM 18 C4 U B 22 21.793 -56.066 10.389 1.00 72.04 C
ATOM 19 O4 U B 22 22.366 -56.167 11.468 1.00 71.91 O
ATOM 20 C5 U B 22 20.665 -55.210 10.123 1.00 71.29 C
ATOM 21 C6 U B 22 20.135 -55.201 8.891 1.00 71.86 C
ATOM 22 P C B 23 15.775 -58.283 7.220 1.00 80.23 P
ATOM 23 OP1 C B 23 14.657 -58.864 6.437 1.00 81.58 O
ATOM 24 OP2 C B 23 15.483 -57.556 8.478 1.00 78.44 O
ATOM 25 O5' C B 23 16.834 -59.435 7.543 1.00 81.76 O
TER
ATOM 2 P C A 23 15.775 -58.283 7.220 1.00 80.23 P
ATOM 3 OP1 C A 23 14.657 -58.864 6.437 1.00 81.58 O
ATOM 4 OP2 C A 23 15.483 -57.556 8.478 1.00 78.44 O
ATOM 5 O5' C A 23 16.834 -59.435 7.543 1.00 81.76 O
ATOM 6 C5' C A 23 17.311 -60.266 6.494 1.00 84.14 C
ATOM 7 C4' C A 23 18.192 -61.357 7.057 1.00 86.10 C
ATOM 8 O4' C A 23 19.449 -60.794 7.512 1.00 84.84 O
ATOM 9 C3' C A 23 17.639 -62.027 8.304 1.00 87.16 C
ATOM 10 O3' C A 23 16.632 -62.966 7.970 1.00 90.10 O
ATOM 11 C2' C A 23 18.910 -62.663 8.849 1.00 87.78 C
ATOM 12 O2' C A 23 19.323 -63.797 8.104 1.00 90.32 O
ATOM 13 C1' C A 23 19.889 -61.503 8.660 1.00 85.17 C
ATOM 14 N1 C A 23 19.974 -60.578 9.848 1.00 82.37 N
ATOM 15 C2 C A 23 20.769 -60.932 10.954 1.00 82.13 C
ATOM 16 O2 C A 23 21.393 -62.000 10.943 1.00 83.24 O
ATOM 17 N3 C A 23 20.833 -60.086 12.020 1.00 80.50 N
ATOM 18 C4 C A 23 20.146 -58.936 12.007 1.00 79.07 C
ATOM 19 N4 C A 23 20.237 -58.134 13.073 1.00 77.96 N
ATOM 20 C5 C A 23 19.333 -58.554 10.895 1.00 78.74 C
ATOM 21 C6 C A 23 19.279 -59.395 9.853 1.00 80.35 C
ATOM 22 P G A 24 15.351 -63.128 8.916 1.00 91.13 P
ATOM 23 OP1 G A 24 14.300 -63.820 8.131 1.00 92.42 O
ATOM 24 OP2 G A 24 15.047 -61.834 9.572 1.00 88.44 O
ATOM 25 O5' G A 24 15.915 -64.115 10.038 1.00 93.35 O
TER
ATOM 1 O3' A B 21 16.812 -51.655 8.563 1.00 69.03 O
ATOM 2 P U B 22 16.236 -53.040 9.114 1.00 70.34 P
ATOM 3 OP1 U B 22 14.783 -53.073 8.814 1.00 70.98 O
ATOM 4 OP2 U B 22 16.677 -53.205 10.518 1.00 70.20 O
ATOM 5 O5' U B 22 17.014 -54.121 8.221 1.00 71.41 O
ATOM 6 C5' U B 22 16.785 -54.197 6.816 1.00 72.03 C
ATOM 7 C4' U B 22 17.741 -55.172 6.162 1.00 73.68 C
ATOM 8 O4' U B 22 19.111 -54.760 6.400 1.00 72.96 O
ATOM 9 C3' U B 22 17.711 -56.580 6.731 1.00 75.70 C
ATOM 10 O3' U B 22 16.606 -57.322 6.239 1.00 78.37 O
ATOM 11 C2' U B 22 19.044 -57.113 6.225 1.00 76.11 C
ATOM 12 O2' U B 22 19.009 -57.452 4.853 1.00 76.81 O
ATOM 13 C1' U B 22 19.946 -55.906 6.490 1.00 74.07 C
ATOM 14 N1 U B 22 20.616 -55.974 7.845 1.00 73.02 N
ATOM 15 C2 U B 22 21.697 -56.821 8.039 1.00 73.80 C
ATOM 16 O2 U B 22 22.170 -57.529 7.170 1.00 75.48 O
ATOM 17 N3 U B 22 22.225 -56.815 9.308 1.00 73.14 N
ATOM 18 C4 U B 22 21.793 -56.066 10.389 1.00 72.04 C
ATOM 19 O4 U B 22 22.366 -56.167 11.468 1.00 71.91 O
ATOM 20 C5 U B 22 20.665 -55.210 10.123 1.00 71.29 C
ATOM 21 C6 U B 22 20.135 -55.201 8.891 1.00 71.86 C
ATOM 22 P C B 23 15.775 -58.283 7.220 1.00 80.23 P
ATOM 23 OP1 C B 23 14.657 -58.864 6.437 1.00 81.58 O
ATOM 24 OP2 C B 23 15.483 -57.556 8.478 1.00 78.44 O
ATOM 25 O5' C B 23 16.834 -59.435 7.543 1.00 81.76 O
TER
Atoms:
C2: (20.769,-60.932,10.954)
OP1: (14.657,-58.864,6.437)
OP2: (15.483,-57.556,8.478)
C4: (20.146,-58.936,12.007)
O5': (16.834,-59.435,7.543)
C3': (17.639,-62.027,8.304)
C1': (19.889,-61.503,8.660)
O4': (19.449,-60.794,7.512)
C5': (17.311,-60.266,6.494)
P: (15.775,-58.283,7.220)
O2: (21.393,-62.000,10.943)
C4': (18.192,-61.357,7.057)
C2': (18.910,-62.663,8.849)
O2': (19.323,-63.797,8.104)
N1: (19.974,-60.578,9.848)
N3: (20.833,-60.086,12.020)
N4: (20.237,-58.134,13.073)
C6: (19.279,-59.395,9.853)
C5: (19.333,-58.554,10.895)
O3': (16.632,-62.966,7.970)
OP1: (14.657,-58.864,6.437)
OP2: (15.483,-57.556,8.478)
C4: (20.146,-58.936,12.007)
O5': (16.834,-59.435,7.543)
C3': (17.639,-62.027,8.304)
C1': (19.889,-61.503,8.660)
O4': (19.449,-60.794,7.512)
C5': (17.311,-60.266,6.494)
P: (15.775,-58.283,7.220)
O2: (21.393,-62.000,10.943)
C4': (18.192,-61.357,7.057)
C2': (18.910,-62.663,8.849)
O2': (19.323,-63.797,8.104)
N1: (19.974,-60.578,9.848)
N3: (20.833,-60.086,12.020)
N4: (20.237,-58.134,13.073)
C6: (19.279,-59.395,9.853)
C5: (19.333,-58.554,10.895)
O3': (16.632,-62.966,7.970)
C4: (21.793,-56.066,10.389)
N3: (22.225,-56.815,9.308)
OP1: (14.783,-53.073,8.814)
OP2: (16.677,-53.205,10.518)
C2: (21.697,-56.821,8.039)
C1': (19.946,-55.906,6.490)
C3': (17.711,-56.580,6.731)
O5': (17.014,-54.121,8.221)
O4': (19.111,-54.760,6.400)
C5': (16.785,-54.197,6.816)
P: (16.236,-53.040,9.114)
C4': (17.741,-55.172,6.162)
C2': (19.044,-57.113,6.225)
O2': (19.009,-57.452,4.853)
N1: (20.616,-55.974,7.845)
O4: (22.366,-56.167,11.468)
O2: (22.170,-57.529,7.170)
C6: (20.135,-55.201,8.891)
C5: (20.665,-55.210,10.123)
O3': (16.606,-57.322,6.239)
N3: (22.225,-56.815,9.308)
OP1: (14.783,-53.073,8.814)
OP2: (16.677,-53.205,10.518)
C2: (21.697,-56.821,8.039)
C1': (19.946,-55.906,6.490)
C3': (17.711,-56.580,6.731)
O5': (17.014,-54.121,8.221)
O4': (19.111,-54.760,6.400)
C5': (16.785,-54.197,6.816)
P: (16.236,-53.040,9.114)
C4': (17.741,-55.172,6.162)
C2': (19.044,-57.113,6.225)
O2': (19.009,-57.452,4.853)
N1: (20.616,-55.974,7.845)
O4: (22.366,-56.167,11.468)
O2: (22.170,-57.529,7.170)
C6: (20.135,-55.201,8.891)
C5: (20.665,-55.210,10.123)
O3': (16.606,-57.322,6.239)
Image (generated by PyMOL):